Sleb004583.1
Basic Information
- Gene Symbol
- F54F2.9_1
- Assembly
- GCA_003285725.2
- Location
- NW:3694030-3696055[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3.1 2.4e+03 -1.7 0.1 6 21 24 38 20 61 0.65 2 3 4.2e-08 3.3e-05 23.5 0.0 4 38 303 340 300 341 0.87 3 3 1.3e-08 1e-05 25.2 0.2 3 43 397 443 395 445 0.80
Sequence Information
- Coding Sequence
- ATGTATATCAGGACAGTAGCAATACTGCTTGGCTGCCTGTTGCTCTGCAACACAGCCGAAGCCTGGCACTCGGAGGAGCTGGAAATTTTCGATCTTGTcgaagaaattaataaaaatttctaCGAGTTTATGAACATCAACCAGAATGCCACGAACAATGAAATTAAACGCGCTTTTCGTACACTGTCCATTCAGCTGCATCCGGATAAGAATCCATCGGAGGATGCGAACATACAGTTCCGTAATCTAGTGTCCATCTATGAAGTGCTCAAGGATGCATCGAAGCGGGAGAAATACGACAAAGTCTTGCGCGATGGAATGCCAAATTGGAAATCCGCATTGTATTATTATCGTCGCATGCGCAAAATTGGTTTGTATGAGGGCGCCTTCATACTGTTCCTCATTATCACCGTCGGACAGTATTTGTTCGCCTGGGCGGCATATTTGGAAAAGAAATATACCGCGGAGCAAGTTTTCGGAACCAAATTGAAGAAACTAcagaagaaaaacaagaatatTGATATGGATGTCATACTTAGTGAGATACCAATGCCGTCTCTCATCAATACATTGCCCTTCCAAATACCGTTGGCCATCTGGAATCTGCCGAAGACAATCATGAATGGTTTCAGTAAAGCAAATGAGTTCAAGGAACTGGCCTTGGAAAAACGCAGACAGGAACTAGAGGCGGCCCGACGGCAGGAGGAGCTCGAAAGGGAGGTGGAGGAACAGGCACGTTTGCGCAAGGAGCACAAAGAGAACTTGCGTAAACGAAAGCAAAACACTAAGGCGCCGGAAAAAACGGAGGAAGAGCTGCGCGGCTATTCCCAGATACAGGCTCGCGAGGTGACCGAAGACGATGCTGTGCGTCCGGCTACTCAGAAGAGCACTGTTAGTGGCGGTTTTTGGACCGATGAAGATCTAGCCGAGCTGATACGCTTGGTAAAGAAATATCCAGGCGGTGCTGGCAGTCGTTGGAACACCATTGCCGAGTCCATGAATCGAACCGTACAGGAGGTCACATTTATGGCAGCCAAAATGAAGGAAAATGGCTATCGCATACCCGGCCAGACGGAAAGTGTGGCCGAGCACATTGTGCAGGAATCCCAAGAGACTGTGCGCAAGGAGAAGCTGAAAAAGGAGGCCGGTGCCGGCACGGGTGAGAAGAGCATGCTCATACCCGAAACGAATTGGACGCAGGAGCAGCAACGTGCTTTGGAGGCGGCCATTGTTAAGTATCGTAAGACGGTTGGTGGTGGCGATCGTTGGCAAAAGATTGCCAACAGTGTGCCAGAAAAGACAAAAGAGGAATGTCTGGTGCGgtacaaatatttgtgcgAACTGGTTAAGTCACAAAAGAAGGCTGAATTGGAGGCTGCGTCGGCTAATGCAAGCACAGACGCCACTCCAACCCAAGTCGAGCCAACAGTTGCCAGTGCCGATGTCGAGGTGTTGGCCGAGATCGAGCCTGAGCCCGAGGCGGCGCCAACGTCGAAAAAGTTAAGCAAACGCGAAAAACGTCGACGCAAACGGGATCTGTCCAGCGGCGAAGACTCGGATGATGCATATCAGTATGAAATAAGTTAG
- Protein Sequence
- MYIRTVAILLGCLLLCNTAEAWHSEELEIFDLVEEINKNFYEFMNINQNATNNEIKRAFRTLSIQLHPDKNPSEDANIQFRNLVSIYEVLKDASKREKYDKVLRDGMPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLINTLPFQIPLAIWNLPKTIMNGFSKANEFKELALEKRRQELEAARRQEELEREVEEQARLRKEHKENLRKRKQNTKAPEKTEEELRGYSQIQAREVTEDDAVRPATQKSTVSGGFWTDEDLAELIRLVKKYPGGAGSRWNTIAESMNRTVQEVTFMAAKMKENGYRIPGQTESVAEHIVQESQETVRKEKLKKEAGAGTGEKSMLIPETNWTQEQQRALEAAIVKYRKTVGGGDRWQKIANSVPEKTKEECLVRYKYLCELVKSQKKAELEAASANASTDATPTQVEPTVASADVEVLAEIEPEPEAAPTSKKLSKREKRRRKRDLSSGEDSDDAYQYEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- -
- 80% Identity
- -