Sleb002282.1
Basic Information
- Gene Symbol
- BAS1
- Assembly
- GCA_003285725.2
- Location
- NW:1007771-1010434[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 8.8 6.9e+03 -3.1 0.1 32 46 211 225 199 225 0.68 2 5 2.2e-15 1.7e-12 46.8 0.6 1 44 231 275 231 277 0.96 3 5 7.5e-05 0.059 13.1 0.0 3 41 288 330 287 335 0.84 4 5 6.8e-09 5.3e-06 26.0 0.0 2 46 342 387 341 387 0.92 5 5 6.5e-11 5.1e-08 32.5 0.1 3 43 395 436 393 439 0.94
Sequence Information
- Coding Sequence
- ATGTGTGATCTTGAGCTGGATCCCGACAAGATCCAGCAGGAGATCATCGAGTTGCTGTTGTCCGTGGGATCAGAAGTGAGCGATGGCAACGCTTTGCTTCTCAATCAGGAAATGCAAAGGATGTTggaacaaatacaaatgcaaataatgaATACGCTGAGTACGGTGCGAGCCCGATATGAGCGCAACGAGCAAATACTGATGCGCCGACTGCAGCCACGAAAGCGGAGGGCCTGCAATGACAACCAAAATATTGGCATAAGTGGAGCTGTGCTGAGAGGCGGGAGTTTCCGTTTTAAGGGAAACCTATATTTTCGAGATATGGACGGACGCAGTTGTCCCAACAATTCGGACTACGAGAAGCGCTGTTGTAGCGAAATGTTTCCAACAGATTTCGACATGCGCTCAAAGCACGTCTGGACCGTATTGGACAAGAAGAACATTGTGATGGGCATTAAGTCGCAGTTGATGGAACATAAGCGTTTCAACGCAAATGGCCTAAAGGACaacaaagtaaaaaaaaacattaatttgcattcaaaAACATTGTTAACTATGCTCTCTGAAGTTAAATACGACAACAGCTTTAAAATCGATTGGTTAGAGATTAGTTCCTTGAACGTAGACTATCGCCACTCGGCTTACAGCTGTGAGGCCATGTGGAATGTATACCTAAGTCCTGAGATTAGGCGTACCAAATGGTCGCAGGAGGAGGATGAGTGCCTATTGAAGCTGGTTAAGGAGCATAATGGCTCTAACTGGCCGGCAATTGCCGAAAAAATGAACAATCGTTCGGACTATCTGTGCTATTTGCGTTATCAGGAGAAACTGCGTTTCTATGACGACGCGAATAGAGCGCACAAATGGAACCACAAGGATGACGAACGCCTCAGAGCAATTGTAGCAAAATATACAACAAACGGTTTTACCGAATGGGCCAGTGTTTTGGCCCACTTTCCGGGAAAGGCTAAGTCCACGCTGATTGGACGCTATACCTATGTTCTGCATCCAAACATTTCTCATGAACCCTTTACGGTGGATGAGGATATTATGCTTTATGCGGCTGTGGAAGAATACAATGGCAGATTTTATTCGATCCCGCGCTCGATGTTTCCAAAGCGATCTTTGACCCAACTACGTACCcgttattttaatgttttggcGCAGCGTCATAAAACCGATTCCTGGTCGATAGAAGACGATAAGAAACTTATTGATTTTGTAGCCAAAAATGGCCAATCTGCGTGGCTCGATTGTGCCGAACATTTGGGAAATCACACGCGGACCAGCTGCCGTACACGCTTTTTGGTCATCAAGCGATATCTGGAACGTTGCCCTAATGCAAAGGTGGAGGACATTCCGCGACGTCGTCCACATAAAAATACTATTGTTACCCAAGAGAATTGGGCGCAGCGCCTTGAGGAATGGAGACAGGATCCAAAATCCCTGGAGCCACAGAAGAAACGCATGAAAGTGGAAAACATATGGGAGAAACAAATGCCGAAAGGCATCGATCTTCAAGTCTATGATTACTTTAAATATGGGTACAATCTGCAATTGGATTACCACCCCAAAGTTACACTGCCGAAAGATAATGTCAATCTTTGTCAGGTCATAAGCACATTATTCTTCAATCCACCTGATCCTGGAGCCTTCAAGAAAATAAGAAGCACGGGCGTGCCGGCGCCTTTGTGTCGCTGCTATACTCAAATGGTTCGAGAACTACAGCTGCCCCTTCTAGAACCAAAAACTCAAGTCCTACCACCTAATTGGTCCACACTAATGGGATTTCGTACCCTTTGCATAGTGTCTAGCTTTTTTGGGCTAGAGGAAGAGCCACAGGTAGATCTGGTGTATGATGAATGCACTCCGGCAGTGCAACTCTTCCGACAACGCCTGCGTGCCCTCTTCTTTCGCGTCGCCCTCTTGACTCGATTGAGTCCGAATCATATTGAGGGAATGTCGACATATCTCGAGGCCCTACCAAAACCTGTAAatgagctgaaaaatgtgaGAACCACAATAGAAGAACGAAATAATAACAGGGAGATTTCCAAAAGGCGAAGAGTTACCGAAGTAAAAGCGGAAGTACAGAGCGATGAGGAGAATGAAAGTCATACTGTCACATTCGAGATCGTTAATGGTAACGAGTCTGATGAATCAAGTCAGATATTGGGATATTGA
- Protein Sequence
- MCDLELDPDKIQQEIIELLLSVGSEVSDGNALLLNQEMQRMLEQIQMQIMNTLSTVRARYERNEQILMRRLQPRKRRACNDNQNIGISGAVLRGGSFRFKGNLYFRDMDGRSCPNNSDYEKRCCSEMFPTDFDMRSKHVWTVLDKKNIVMGIKSQLMEHKRFNANGLKDNKVKKNINLHSKTLLTMLSEVKYDNSFKIDWLEISSLNVDYRHSAYSCEAMWNVYLSPEIRRTKWSQEEDECLLKLVKEHNGSNWPAIAEKMNNRSDYLCYLRYQEKLRFYDDANRAHKWNHKDDERLRAIVAKYTTNGFTEWASVLAHFPGKAKSTLIGRYTYVLHPNISHEPFTVDEDIMLYAAVEEYNGRFYSIPRSMFPKRSLTQLRTRYFNVLAQRHKTDSWSIEDDKKLIDFVAKNGQSAWLDCAEHLGNHTRTSCRTRFLVIKRYLERCPNAKVEDIPRRRPHKNTIVTQENWAQRLEEWRQDPKSLEPQKKRMKVENIWEKQMPKGIDLQVYDYFKYGYNLQLDYHPKVTLPKDNVNLCQVISTLFFNPPDPGAFKKIRSTGVPAPLCRCYTQMVRELQLPLLEPKTQVLPPNWSTLMGFRTLCIVSSFFGLEEEPQVDLVYDECTPAVQLFRQRLRALFFRVALLTRLSPNHIEGMSTYLEALPKPVNELKNVRTTIEERNNNREISKRRRVTEVKAEVQSDEENESHTVTFEIVNGNESDESSQILGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -