Sleb003327.1
Basic Information
- Gene Symbol
- Mblk-1
- Assembly
- GCA_003285725.2
- Location
- NW:15041957-15143601[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.4e-13 1.8e-09 36.7 0.1 1 45 383 428 383 428 0.94 2 2 7.2e-19 1.4e-15 56.3 0.0 1 43 862 905 862 907 0.95
Sequence Information
- Coding Sequence
- atggcCGAATGCTCATTCGCCCGCTGCCTGCAGGAGCGTCGCCTCATCAAACGCGAGCTCATGAAATGGTCCAAGGATATGCTGCACATTGTGGGTCTAGAACGCGTCGCTGAAGAATTCATGGGTCGCAGGATATGGAAACACTATCAGGAGCAACAAACGCGCACCCAATTGAATATAGCAGATCAACAGCCCATTGCAACAGGCATCCAGGACGATCCCAATACAGCTCAAGCGACAGGCAAattcagcagcaacagcaattgcaagcaacaacaacacgaaccACCAAACCACCGTCTACAACAAACGCACGCAGCGCAGCCAAAGGAAAACGGTCAACAATCAAACGACAAACCGCAATTTGAAGACGATTTTGacaacaaacacacatcacACGATATAgctacaaacacaaatacaacatCACGTACACCATCACCACCGCCTGAACCCAACGATTGGACACCGTCTGATAAGTGTAATTTCTGTGTTAACGGTCGTTTGCTAACGGTGAACGCCAAAGGTGAATTGGTGGCCGAAACGGCGCTGACAACAACgtccaacaacaataacagcagcaacttcAGCTACAATATTGCCGCTGTGGATTCAAAGCAGCTGCAGcCTCAGCTCGATAGCGACAGTGACAACTCGAGCATATCGCCgcgcaactgcaacaacaacaataataagctGAAGCTTACGAAGCCCGCCACAACGGCACACACCGCCAACGGAACGtcggcggcaacaacaacaacaccaccatcAACAACTTCTATAGAACTTTATAAGCTGCTCACACAGCAAGCGGCCACAATGACATCCATGGACTCAATGGCCGCACAGTTGGCTGCAATACAAAAGATATCGGAATTGCAAACAAACTTTAATTTGATCAACTCGCTGGCCaatcatcagcaacagcaacaacaacaacagcatacTAACTCGGTAACGCCAACTACCTCAGAAGTATCTGCCGCCGCAATAAGTCCAACACTCAAAGATACACCCAGTCCCAGTGCAGATGCACCATTAGATCTTAGTTCCAAACCGTCACCAAATTCATCGATTAGCGGTGATCTAAAGTCAGGAAGAACGATATCTGAGTGTGCGACGCCCACACCACGTCGCAGCTACAGCGAGGAGGATCTGAAGAGCGCCTTGCACGACATATTGGCGAATAAGGTGGGCACGCGAAAGGCAGCCAGCCAGTACAATGTGCCGCGCTCTACACTGCGCAACAAGCTCTACAAGATGACGCTGGAGGCGAAGCGCAACAATGCGCCGACGCCGCCTGAGCTTCAACAACTGCAGCACGAGCTGGAGCAGGAGGAGTCGGGTGATGAATACGGCGGCCCCATGGGCAGTGGCTTGGGACTGGGTATGGGGCGCGGTGATGACAGCAATCAAGGCAGTGATATGGGTGAGGAATTGGAGCATGGAGGCTCACCCAAATTGTCCGGAGCATTGCGCGCACAAAACCTCACGCCTACAGGTAATGTTCCAGCTGTTGGTAGTAGTGGTGGTGCCATGCCGCCCATGCCCATCGATCCAAATGTGCTGCTACACACGCTCATGGTGGCCGCAGGCATCGGAGTCATGCCAAAGCTGGACGAGACGCAGACACTGGGTGACCTTGTAAAGACACTAATGATTGCCAGCAGGGGCAGCATCATTAGTGAGGTCTTTGCCAGTGCGGCAGCTGTAGCGGAAAGCAATGTGGCGACTGCCCTACAAAATGGCGCACCACCTGGCCTGCTCGATCAGCATCTGTTGCTGCAGCAAatccaacagcaacagtctCAGTCCCATCACCACCAGccgctgcaacaacaacagcaacaacacctgATTGGCGGCCTGCCGTATCGGCATCGTTTACCAAAGTCTGACACACCGGAGACAACCTCGTCCCTGGACACGAACGAGGCGTGTGATGATCCTATACTGAAGATTCCGTCCTTCAAATTAACAGGCGCGTCTAGTGTGTCGCCCTCGCTGctagccagcagcagcagcaataacaacaccTCCAACTGCAGCAATAACCGCAATGGTGGCGATCAGAGTCCCCACTCCGCTTCACCGATGCTGGCAGCTGCAGTCGTGGCTgcggccaacaacaactatcgCCAAAGCGGCAGTGTGCTCTCACCCTCGCCGGTGTCCATACAGAAGATGATGGCCAACACCATACAGCGTAAGATCAACGAGCAGACCACCCAGGATgcggcggcggctgctgcAGCCAATATCTTGGGTCTGGGCGTCGCCGATGGCAAGCGCAACAATGGCAATACCAGCGGCAGTGAGTGTAGTAGCAGCGGTGGTGCTGCCGGAGGCGGTGGTTCCGGTGTTACAAGCAGCGGTAGCTACAAGAAGCCCAGTATATCCGTAGCCAAGTTCATTGGGGACACGGATACCTCTCGCTTTGGAGCCTCACCCAATCTGCTGGCCCAACAGCACCATGGACACCTGCCCTCACACCACGCGCATCAGCTCAGTGCTCAGGATGCCGCCGCCCTGGCCGCGGGCAAGGGCACGCGTCCAAAACGCGGCAAATATCGCAATTATGATCGCGATAGTCTTGTGGAGGCGGTTAAGGCAGTGCAGCGTGGCGAGATGTCTGTGCATCGTGCCGGCAGCTACTACGGTGTGCCGCACTCCACACTGGAGTACAAGGTAAAGGAGCGCCATCTAATGCGACCCAGAAAGCGTGAACCAAAGCCGCAGCCAGATCTGGTGGGACTAACAGGCGCCGCCAATAAACACAATCCAAACATTCCAGGTCTCAATCACCTCGACAAGCTAAAGGCGAGCAACAACAGTGCCGGCTCAAAGCTGAGCAATGCGCTCAAGAATAATAGTCaggccgcagcagcagcggcggctgcagcggcagcagctgcagcagccaaCACGCCCAATGGCATGAAGTTGCCAATCTTTGATGCCACCGCACAGTTGCCCTTTCAGGCAAATATGTTTTGGCAGCAGCCAGGCAACGCCAACTATGGACTGGACTTCAATCGTAATCCAGAGTTTCTCAAAACGCATCTAGCCGAGGCCATACGTCTGAATGCCGgcgccaacaacaatgccaatagcagcagcgacagcccGCTCGGAGGCATCAGTCAGAACCATCATCACGGTGTGCCGCCGATGAAGAGTGCCCTGGACTTTACCGAAAACATGTACGACGGCATCATACGCAAGACGCTTAAGAACAGCGATGGCAGCAACATGGGTGGCAATGGCAACGCCTTGCTGGACCAGCTGCTGGTAAAGAAGACGCCATTGCCCTTCACCAACAATCGCAGCAATGACTACTCGGCGGCCTGCTCTAGCTCCGAAGCGGGTGGCAAGCGGGCGGGCAGTCCGCTGGCAGCCTATGCGGACATTAAGCGCGAGCGTCTCAGCCCGGAACGTTGTGCGGACAGCACCAGCAGCGATGAGGAGCAtcccagcagcaacaataacaataacaacaacaacaacagcgagtCGGCGCACAACAAGAACCAGAGTAGCCACAACAAGtgcaacaacggcagcagcaacagcaccaccagcaacaacgGCCGCAGTCGCATGACATCTCGTGACTCAGAAACGGATGCCAGCAGCTTGAAGAGCGAACATTCCACACACAGCTCTGCCCCCCATGCGCAcgcgaacaacaacaaaatgatgGATCTCAATGGCACCGCGAAGCGCGAGGCGCAGTACGCGGCGCCAGATGCCATGCCCAACTCATCGATTCTGCAAGAGAAGTTGGCGCAGATTAAGGCCGAGCTGGCGGAGTGTGCTGCCTCCGAGGAGCCCTTATAG
- Protein Sequence
- MAECSFARCLQERRLIKRELMKWSKDMLHIVGLERVAEEFMGRRIWKHYQEQQTRTQLNIADQQPIATGIQDDPNTAQATGKFSSNSNCKQQQHEPPNHRLQQTHAAQPKENGQQSNDKPQFEDDFDNKHTSHDIATNTNTTSRTPSPPPEPNDWTPSDKCNFCVNGRLLTVNAKGELVAETALTTTSNNNNSSNFSYNIAAVDSKQLQPQLDSDSDNSSISPRNCNNNNNKLKLTKPATTAHTANGTSAATTTTPPSTTSIELYKLLTQQAATMTSMDSMAAQLAAIQKISELQTNFNLINSLANHQQQQQQQQHTNSVTPTTSEVSAAAISPTLKDTPSPSADAPLDLSSKPSPNSSISGDLKSGRTISECATPTPRRSYSEEDLKSALHDILANKVGTRKAASQYNVPRSTLRNKLYKMTLEAKRNNAPTPPELQQLQHELEQEESGDEYGGPMGSGLGLGMGRGDDSNQGSDMGEELEHGGSPKLSGALRAQNLTPTGNVPAVGSSGGAMPPMPIDPNVLLHTLMVAAGIGVMPKLDETQTLGDLVKTLMIASRGSIISEVFASAAAVAESNVATALQNGAPPGLLDQHLLLQQIQQQQSQSHHHQPLQQQQQQHLIGGLPYRHRLPKSDTPETTSSLDTNEACDDPILKIPSFKLTGASSVSPSLLASSSSNNNTSNCSNNRNGGDQSPHSASPMLAAAVVAAANNNYRQSGSVLSPSPVSIQKMMANTIQRKINEQTTQDAAAAAAANILGLGVADGKRNNGNTSGSECSSSGGAAGGGGSGVTSSGSYKKPSISVAKFIGDTDTSRFGASPNLLAQQHHGHLPSHHAHQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKHNPNIPGLNHLDKLKASNNSAGSKLSNALKNNSQAAAAAAAAAAAAAAANTPNGMKLPIFDATAQLPFQANMFWQQPGNANYGLDFNRNPEFLKTHLAEAIRLNAGANNNANSSSDSPLGGISQNHHHGVPPMKSALDFTENMYDGIIRKTLKNSDGSNMGGNGNALLDQLLVKKTPLPFTNNRSNDYSAACSSSEAGGKRAGSPLAAYADIKRERLSPERCADSTSSDEEHPSSNNNNNNNNNSESAHNKNQSSHNKCNNGSSNSTTSNNGRSRMTSRDSETDASSLKSEHSTHSSAPHAHANNNKMMDLNGTAKREAQYAAPDAMPNSSILQEKLAQIKAELAECAASEEPL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -