Sleb001563.1
Basic Information
- Gene Symbol
- ct
- Assembly
- GCA_003285725.2
- Location
- NW:921346-1034112[+]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.4e-27 4.3e-23 80.7 0.0 3 72 954 1024 952 1029 0.95 2 3 6.3e-32 4.2e-28 96.8 0.0 3 77 1434 1509 1432 1511 0.96 3 3 3.7e-31 2.5e-27 94.3 0.0 3 77 1714 1789 1712 1791 0.96
Sequence Information
- Coding Sequence
- ATGCAGCCAACATTGCCACAAGCCGCTGGGACAGCCGATATGGATCTGACGGCTGTTCAATCAATCAACGATTGGTTTTTCAAAAAggagcaaatttatttattggcacAATTTTGGCAACAGCGCGCAACACTAGCCGAGAAGGAAGTGAACACACTGAAAGAGCAACTCAACACAAATACGCCCAGCAGTAATAACAGCGACgataataacagcaacacaGCAGCAGGACCAGCAGGACCTGGTGGTGCAGCAGCTAGTGacgaagaagcagcagcagcagcagcagcggctgtAGCTGCAATTGGAGCAGaggctgctgccgttgccggcAATCCCAACGATACGGACAGCGAACGCAAGCTGCTCAATAGCGTTGCAGCGGCGATTACGCTGCATCAAAACGGCGGCAATCTGCTGGCCACCAACacaccatcaccatcgccgCCATTGCTCAGCgctgagcagcagcagcaattgcaCAGCAGCCTGCAGCAGAACGGCGTTAACGGGTGCCTCAATCCAAAGCTCTTCTTCAATCACGCTCAGCAAATGATGATGGAagcggcggctgctgctgctgctgcagcggctGCAGCTGCGGCGGctgcgcaacaacaacaacagcaacagcaatcgcCAATGCATTCGCCCACAGGTGCTGCTCCAGTTGGGGCAGCAACACCtgccccagcaacaacaacagccactggcaacacacaacagcaacagcagcaaatcGGTCGTGATGTTGCTGAGCATCAAACAGcgagtggcaacaacaacagcagctgcaacaatgTTGCCGGCGCTGATGACGATgaagacgatgatgatgaggatgtATCGATGCATTCGAATATGGCGCATGCCGATGGCGATgaggacgatgacgacgagCTCGAGGAGCAGGCTGTGGAGCAGGAGGATATTGAAGCAGCTGCcactgttgctgccgttgccgctactgttactgctgctggtCCAGATGCCAGAACTGACAACAGCAATGAGCATATTGCGGATGATGTGGCAACTCTggaacatcagcaacaacaacaacaacaacagcacaatgAGTTGGATGAAGCTAGTTTAAATGTTAGCAATAATCACAATACCGATAGCAATAATATCTGTAGTCgaaagaacagcaacaacaacaacaacagtctgCCACAACATGTTGCACTGCGtgataataatgataatgagCAGCATGTGGCCAGCGCTGAGGACGACGATTGCACCAACAataacactaacaacaacaacaacaacaatgagaagCGCAAGAAGCGTAACGccagtaataacaacaacaacaataataataataacaacaatcaaCATGCTGTTTTATTAGCTGCCAAAGATAAAGAGATTAAAGCACTTTTGGATGAGTTGCAACGCCTGCGCGCACTCGAACAAACCCATCTGGTACAAATCCAACGCCTTGAGGAGCATCTGGAGGTGAAACGTCAGCATATAATGCGCTTGGAGGCGCGTCTGGATAAGCAGCAAATCAATGAGGCATTGGCCGAGGCCACAGCGCTAGCagctgccgttgctgccacaaataataataacaacaacaacaataacaatagcagcaacaacaatgttgaTGGAGCACCAGACAACCAGGTTAACAACGATTTGGCCGTAGTATCCAAATCATCTGAGCTACCAACCGAAGACAACGATGCCCACATGATCGATGAGGATGAGGACGAGGAGGACGACAATGCCCTCAATGAGCTGCACAGTGAGCAGCAACGGGAACAGGTGCCGCAAACCGAGGACGACGCCGATATGTTGAGTGTGGCACATGGAACGGACAGCAACAGCGAGATGAAAATCAAAAAGGAGCACCACAGTCCCCTGGATCTGAATGTGCTCAGTCCACAGTCGGCGATtgccgctgcagcagcagctgccgccGCAGCCGCCTGCGCCAACGATCCCAACAAATTCCAAGCGCTATTGCTCGAACGCACCAAGGCCCTGGCCGCTGAGGCGCTCAAGAATGGCGCCGCCAACGAGACCGGAGTCGTTGCCAGCGAAGACGGTCTCTCCTCGCATCATCAGCatccacagcagcaacagcagcagccacatcatcatcaccaacaGCAGTCGCACCACCTTGCCTCGTCGCTgcaccacagcagcagcaacagcagcagcagcggcgtcGGCGGCCCCGCCACCAACAATGCTccatccagcaacaacaataataacaacaacaatagcattAATATCAAAAACGAAGAGCAACACAAGCTGGCCCTCAACCATcaccagcaacaccagcagcaccaTCATCACGCCCTGgcggctgccgctgctgcccaCCATGCGGCGACCCACCATCTGCACGACTCCAACTCCTCCAGCGCCAATAGTACACCGAATGCGCCCAGCAGTGGTGCCGCTGCCGCTCAGCTAGCCGCCAGCATTGCGTCAACGCTGAATGGCAACAAATCGTTGCTGCaagcagctgctgccgccaATGCTGCGGCCGCTGCTGTCGCCGTTGccgaagacaacaacaatagcttgACACCCAATGCGAATGCGGCGGCTGCCGCGGCAGCAATGGCTGCGCATGCCCAACACGCTCATGCCTTAGGCGCCCCCGGATTCTTGCCCAGCCTGCCGTTTCAGTTTGCCGCCGCAGCGGCTGCCGGCCAAGAGGCGCGCGGCCATTATCGTTTCGCTGATGCGGAACTGCAATTGCCGCCCGGCGCTTCGATGGCCGGCCGCTTGGGTGAGTCACTGATACCCAAGGGTGATCCCATGGAGGCCAAATTGCAGGAGATGCTGCGCTACAACATGGACAAATATGCGAACCAGGCTTTGGACACATTGCACATCTCGCGCCGTGTCCGGGAATTGCTATCCGTGCACAATATCGGACAGCGATTGTTTGCCAAATACATTTTGGGACTATCACAGGGCACGGTATCCGAGCTGCTTAGCAAGCCCAAGCCCTGGGATAAGCTCACCGAGAAGGGACGTGACAGCTATCGCAAAATGCACGCCTGGGCCTGTGATGATAATGCGGTGATGCTCCTCAAATCGCTCATACCCAAGAAAGATTCTGGACTGCCACAGTATGCGGGACGCGGAAGCGTTGGCAGCGGCCCTGGTGGTGATGATTCCATGTCCGAGGACCGCATTGCGCACATTCTAAGCGAAGCCTCATCGCTGATGAAGAGTAACGCGCAGGCGCAACAGGAGCATCAAAGACGCGCCAGCGCCCACGGTGGCGATGACACGCACAGCAACGAGGACAGCAAATCGCCACCGCAGACCTGCACCTCACCCTTCTTCAAGGTGGACCATCAGCTGAAGCAGCAGCATGTCGATCATGCGCAGCGCGAACAGCAACGCGAGCAGCAACGCGAAGCAGCCGTTGCAGCcgcccagcaacagcaacgcgAGCAGCGCGAAGTGGCGGCCGCGCAGCGTGAGCAGCGACTTAGACAAGAGGACTTTGCCCAGGACAAGATGACGCGTCTATATCAAGAGATCATGGCGCGCACACCACGAGAAGCCTTCCCCGGCTTTTTGCTGTCACCTTTCTTTGGTGGCGCCGCCGGCATGCCCAGTGCGCCGAATACATTCCCCACGGCAATGGCCGCCGATGAGAATATGCGACACGCCTTCGAGCGTGAGATCGccaagctgcagcagcaacaacaacagcaggcagCCGCCGCCAGCTTTCCAAACTTCTCCAGCCTGATGGCACTGCAGCAGCAGGTGCTGAATGGCGCTCAGGACTTGTCGTTGGGCGGTGGTGCCGGCACCGGCAAGGATATGCTCAAGGACATCAAGTTGAATGGACAGCGCGGATCACTGGAGCACTCGCAAAGCTCCAAGGATGGTGAACGCGACGATGAGCGTCATGCCGCTGGAGGTGTCGCAAACGCAGCTAACGCCGCAGCCTTCGGCTTAATGGCCCGCAAATCGGAAAGCGTGACGAGTGGAAATGGCGGTGGCGGAGGTGGTGGCAGCACACccgcaccaccagcaccacccaGCAGCAACGCATCGGCTCAGCACACAAGCAACTCAGCGGCTCCCAGTCCGCTCAGCAATTCCATTTTACCCCCGGCTCTCAGTCAAGGCGATGAGTTCGCCGCCACTGCCAGTCCATTGCAACGCATGGCCAGCATCACAAACTCGCTTATCACACAGCCACCAGTCACGCCGCACCATTCGACGCCACAGCGACCCACCAAAGCGGTGCTGCCACCGATTACCCAACAGCAATTCGACATGTTCAACAACCTGAACACTGAAGACATTGTGCGACGCGTCAAGGAGGCGCTCTCCCAATACTCCATATCGCAGCGACTCTTTGGCGAGTCCGTGCTAGGTCTATCGCAGGGCTCTGTTTCTGATCTGCTGGCGCGCCCCAAGCCCTGGCACATGCTGACCCAAAAGGGTCGCGAGCCCTTCATACGCATGAAGATGTTCCTGGAGGATGAGAATGCGGTGCACAAACTGGTCGCGAGTCAATACAAGATCGCACCCGAGAAACTGATGCGCACCGGCAGCTATAGCGGCAGTCCACAGATACCCCAGGGACTGGCCAACAAGATGCAAGCCACCCTGCCCATGCAGAAGATGATGAACGAACTGAAGCTCCAGGAGCCGGCACAGGCTCAGCACATCATGCAACAAATGCATGCTGCGGCTGCAATGTCGGCGGCtatgcagcaacagcaggcaGCCGCCGCTGTAGCACAGCAGCAGAGtcaacagcatcagcatgcagcggctgcggctcaagcagctgcagcagcggcagcagcggccgGTCTTCATCACCAGAACATGCTGCTCACCTCACCGGGCCTACCGCCACAACATGCCATCAGCTTGCCAGCCGCAACTGGCAACAATGGTGGAGGCGGCTGCGTGCCTGGAGTCGGCAATTCATCGAATGCAGCACCCGGTGGTGCTGGCGGCTCAGCGCCCGGTAGTGGTGCTGTGGGCGTCCCCGGTGTCTCTGAGAAGAAGCCAATGTTGATGCCAGTGCACGGCGCTCATGCGCCCAATGCCATGCGTAGCCTTCATCAGCACATGTCGCCCACCGTCTACGAGATGGCCGCACTCACGCAAGATCTTGACACTCACGACATAACCACCAAGATCAAGGAGGCACTTCTGGCCAACAATATCGGCCAGAAGATCTTCGGCGAGGCTGTATTGGGACTATCGCAGGGCTCCGTGTCGGAGTTGCTCAGCAAACCAAAGCCGTGGCACATGCTCTCCATCAAGGGTCGAGAACCCTTTATTCGCATGCAGCTTTGGCTAAGCGATGCCAATAATGTTGAGCGGCTGCAGGTGCTGAAGAACGAGCGTCGTGAGGCAAGTAAGAGACGTCGCTCCACGGGCCCCAATCAGCAAGACAACAGCTCAGATACATCGAGCAATGATACCAACGACTTCTATACGAGCAGCCCGGGGCCGGGCAGCGTCGGCAGTTCTGTGGGTGGGGCACCACCAAATAAGAAGCAGCGTGTACTCTTCTCGGAGGAACAAAAGGAAGCTCTCCGCCTCGCCTTCGCCCTAGATCCCTACCCCAACGTGGGCACCATTGAGTTTCTGGCCAACGAGCTGGGCCTAGCGACACGCACCATCACGAACTGGTTCCACAATCACCGTATGCGTCTGAAGCAACAAGTGCCGCATGGCCAACCTGGTGCTGATAATCCCATACCCAGTCGAGAGAACACAAACGCCACCCCCTTCGATCCCGTCCAGTTTCGCATTCTGCTGCAACAGCGCCTCGTCGAGCTGCATAAGGAGCGCATGGGCTTGAGTGGTGCGCCCATACCCTACCCACCGTACTTTGCTGCCGCAGCCCTTCTCGGGCGCAGTCTGGCCGGCATACCAggcgctgccgccgccgcagGTGCAGCAGCCGCTGCAGCTGCCGCCGCTGGTGCAGCTGGTGAGAACGAACTGCAAGCCCTAAACCAGGCCTTCAAGGAGCAAATGAGCGGCCTGGACCTCTCCATGTCGACACTAAAGCGGGAGCGCACCGATGAATACCAAGACGATCTAGAGCTAGATGCCAGCGCCCACAACATGAGCGACAACGAATCCCTCGAGGGTCCCGATGCGGATGCCGACAAGCTAAGCGCCGCCACCGCTGCCGACTACGAGAAGGTTATGCAGAAGTCTCTCGCCTCAGCGGCAGCTGCCTACATGAGTAATGCGGTGCGCAGCTCCCGTCGCAAGCCCGCAGCCCCCCAATGGGTTAACCCCGCTGCTGCAGCACCCGTCggtgcagctgctgctgcagccgttgctgcggcggctgctgcggccgccgctgctgccgccgccgacAGCGAGCGCATCATCAACGGTGTATGTGTGATGCAACCCTCAGACTACAGTCGCGACGAAGCAGCCGCTGTGGAGGCCTCCAAAGCAGAGAACACCCCTAGCGAGCACGGCGATCACGAGCACGAGCATGCGCATATGGAGATCGATCAGCGCTTTATGGAGCCGGAGGTGCACATCAAGCAGGAGGAGGACGACGATGAGGAGACTCTGAACGATGAGTGCCGCAGCGATGCGACGCACGATGACAAAAAAATCAAGGTGATCAATGAGGAGAAGCTGCGTTTGGTGCGCGTCCAGCGACTGAGCAGTAATGGGGCCTCGGCCCCGGTTGCCGGCAGCGGCGCTGAAGCTGAGGACGGATGTGCGCCGGCGCAGGCAGCGGGCGCGACGCCAGCACCAGCTTCGGCAGCAACTGCAGCGTGGAACTATTAG
- Protein Sequence
- MQPTLPQAAGTADMDLTAVQSINDWFFKKEQIYLLAQFWQQRATLAEKEVNTLKEQLNTNTPSSNNSDDNNSNTAAGPAGPGGAAASDEEAAAAAAAAVAAIGAEAAAVAGNPNDTDSERKLLNSVAAAITLHQNGGNLLATNTPSPSPPLLSAEQQQQLHSSLQQNGVNGCLNPKLFFNHAQQMMMEAAAAAAAAAAAAAAAAQQQQQQQQSPMHSPTGAAPVGAATPAPATTTATGNTQQQQQQIGRDVAEHQTASGNNNSSCNNVAGADDDEDDDDEDVSMHSNMAHADGDEDDDDELEEQAVEQEDIEAAATVAAVAATVTAAGPDARTDNSNEHIADDVATLEHQQQQQQQQHNELDEASLNVSNNHNTDSNNICSRKNSNNNNNSLPQHVALRDNNDNEQHVASAEDDDCTNNNTNNNNNNNEKRKKRNASNNNNNNNNNNNNQHAVLLAAKDKEIKALLDELQRLRALEQTHLVQIQRLEEHLEVKRQHIMRLEARLDKQQINEALAEATALAAAVAATNNNNNNNNNNSSNNNVDGAPDNQVNNDLAVVSKSSELPTEDNDAHMIDEDEDEEDDNALNELHSEQQREQVPQTEDDADMLSVAHGTDSNSEMKIKKEHHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGAANETGVVASEDGLSSHHQHPQQQQQQPHHHHQQQSHHLASSLHHSSSNSSSSGVGGPATNNAPSSNNNNNNNNSINIKNEEQHKLALNHHQQHQQHHHHALAAAAAAHHAATHHLHDSNSSSANSTPNAPSSGAAAAQLAASIASTLNGNKSLLQAAAAANAAAAAVAVAEDNNNSLTPNANAAAAAAAMAAHAQHAHALGAPGFLPSLPFQFAAAAAAGQEARGHYRFADAELQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYAGRGSVGSGPGGDDSMSEDRIAHILSEASSLMKSNAQAQQEHQRRASAHGGDDTHSNEDSKSPPQTCTSPFFKVDHQLKQQHVDHAQREQQREQQREAAVAAAQQQQREQREVAAAQREQRLRQEDFAQDKMTRLYQEIMARTPREAFPGFLLSPFFGGAAGMPSAPNTFPTAMAADENMRHAFEREIAKLQQQQQQQAAAASFPNFSSLMALQQQVLNGAQDLSLGGGAGTGKDMLKDIKLNGQRGSLEHSQSSKDGERDDERHAAGGVANAANAAAFGLMARKSESVTSGNGGGGGGGSTPAPPAPPSSNASAQHTSNSAAPSPLSNSILPPALSQGDEFAATASPLQRMASITNSLITQPPVTPHHSTPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMQATLPMQKMMNELKLQEPAQAQHIMQQMHAAAAMSAAMQQQQAAAAVAQQQSQQHQHAAAAAQAAAAAAAAAGLHHQNMLLTSPGLPPQHAISLPAATGNNGGGGCVPGVGNSSNAAPGGAGGSAPGSGAVGVPGVSEKKPMLMPVHGAHAPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVGGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPGADNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAAGAAGENELQALNQAFKEQMSGLDLSMSTLKRERTDEYQDDLELDASAHNMSDNESLEGPDADADKLSAATAADYEKVMQKSLASAAAAYMSNAVRSSRRKPAAPQWVNPAAAAPVGAAAAAAVAAAAAAAAAAAAADSERIINGVCVMQPSDYSRDEAAAVEASKAENTPSEHGDHEHEHAHMEIDQRFMEPEVHIKQEEDDDEETLNDECRSDATHDDKKIKVINEEKLRLVRVQRLSSNGASAPVAGSGAEAEDGCAPAQAAGATPAPASAATAAWNY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319654;
- 90% Identity
- iTF_01319654;
- 80% Identity
- iTF_01319654;