Sleb001273.1
Basic Information
- Gene Symbol
- osa_1
- Assembly
- GCA_003285725.2
- Location
- NW:1471010-1528336[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-24 3.8e-21 74.8 0.0 3 89 1031 1117 1029 1117 0.92
Sequence Information
- Coding Sequence
- atgaatgaaaaaataaaatcgcccTCGTCACAGGGTTCCAGCGGCGCTGCGTCTGGTGGTGCAGGTGGGGCCACAGCAGGAGCGGCTGCCGCAGCCGCGAGTGGCGCCACACCACCAACATCGGGTGGTCCCCCAACGCCCAACAATGGGAGTGATCCTAATATACAACAAGGTGGTGGTGGCGTCGCACCCCATCCATATGGTGCTCCACCACCACCTCCTGGCGGAGCGCCTGGTGCACCACCTGACCCATCCGCCGTCATGCAACACTATCATCATctacatcaacaacaacagcagcagcaaccaccaCATCCCCAAGGGCCGCCGCCACCGCACATGCAACATCATGGTGGCCCACCGCCACCACAAGGCCCAGCTCCACCACCCGGTGGTCCCGAACATACTCCTGGCGTGAAAGATGATTACGGTGGCCCACATCTGCCCCCGCCACCTGGCGCTCAACATCCACACGCGCATCCTGCCTATGGGCGTTACCATGCTGGTGATCCCAATATGGATCCCTACCGCTATGGACATCCGCCAATGCAACAGCCACCACCGGGTGGcaaaccaccaccacctcatcagcaacaacaacagcaaggtACCGGTGGTTCACCCAATAGACCACCTCAACAACGTTATATACCCGGTCAACCGCCGCAAGGGCCAACGCCTACGTTGAATTCATTGCTGCAGTCATCAAatccgccgccaccgccgcagCATCGGTACGCGAATAGCTATGACCCACAGCAAGCTGCTTCGGCAGCTGCGGCAGCGGCTGCAGcagcccaacaacaacagcagcagcaacatcaacaaaatgCGCAACAACCGGGCGGACCACCTCCGCCACCACAACATCAACCATATGGAGCGCAACAGGGCGGTTGGGCGCCTCCGCCGAGACCCTACAGTCCGCAGTTGGGGCCATCGCAGCAGTATAGAACGCCACCACCGACAAATACTTCCAGAGGTCAATCACCTTATCCGCCAGCGCATGGTCAAAACTCAGGTTCCTATCCAAGTTCAccccagcaacagcaacaacaacagcaggcggcgcagcagcaacaacaagcagcacaacaacaacaacctggTGGGGTTGGAGCAGCTGGCgcgccagcaccaccacctGGCGCAtcgcaacaaccacaacagcagcaaccacaacaaactACACCGCCAGCATCTCAATATTCGCCGTACCCGCAAAGATATCCTACACCGCCTGGCTTACCAGGAAGCGGACCAAATCATCGAACTGCCTACACGACGCATCAGTATCCTGAACCCAATCGGCCTTGGCCGGGTGGTTCATCGCCTGCACCTAGTCCCGGACCCGGTGGTCATCCATTGCCGCCCGCCTCGCCGCATCATGCgccgccgcagcagcagcaacaacaacctcCACCGCCGCCACATGCGACGGCCGGTGGTCCACCGCCCAGCAGTAGTCCAGGACATGCGCCAAGTCCGTCACCGCAGCCCTCGCAggcatcgccatcgccacATCAgGAGCTAATTGGCCAAAATAGCAACGACAGCTCGAGTGGGGGCGCACACAGCGGCATGGGCTCTGGACCGCCGGGCACCCCAAATCCACAGCAAGTGATGCGACCCACACCATCGCCCACTGGCTCGTCCGGTTCACGTTCCATGTCGCCGGCCGTAGCACAAAATCATCCGATCTCGCGTCCGGCGAGCAATCAGTCAAGCGGTGGCGGTCCCATGCAGCAGCCACCAGTGGGCGCCGGTCCGCCACCAATGCCGCCGCACGGTCTACCCGGTGTACcaccgcagcagcagcaacaacaacagcagcagcagcaacaatctCAACCCCAGCAGGCTTCAAATTCAGCCTCATCGGCGAGCAATTCGCCACAGCAGACACCGCCACCAACGGCGCAGCCAAATCAAAGCATTAACAACATGGCCacaccaccgccaccgcaGGGTGCAGCCGGTGGCTATCCCATGCCACCACACCTCATTGGCACCTATAAAATGGGCGGACCGGGACAAAGTCCCGGCGCACAGGGCTACCATCCGCcacaacagccgcaacaaTATGCGCAAGGCAACTACGCGCCACGCCCACAGTATCCGCCGGGAGCCTATGCCACCGGTCCACCGCCACCGCCTACAAGTCAAGCCGGTGGTGTTGGCGCCAATAACATGCCACCCGGCGCACAAGCAGGCTATCCGGGCCGACCCATGCCCAATCATAGCGGCGGAAGTCCGCATGCACCGTATCCGCCCTATCAGTGGGTGCCACCGTCGCCACAGCAATCCGTGCCCGGCGGCGGAGCGCCCGGACAGGTGGGCAATCATGTGCAAAACAAGGGCACCCCACCACCGGTGGGACCGCCACCAACTCAAGGAGGTGGCTCACCACGTCCTATCAACTATCTGAAACAGCATTTACAGCACAAAGGTGGCTACGGGGCCAGCCCCACACCGCCGCAGGGCTATGGCAATGGGCCCGCAGGCATGCATCCCGGCATGCCAATGGGTCCACCTCATCATATGGGTCCGCCGCACGGACCAACGAGCATGGGTCCGCCAACAAGTACGCCCCCACAGTCGATGATGGGCGCACAGGCGGGCAGTGATAGTGGACCCCCGGAGCATATATCGCAGGATAATGGCATTAGCTCATCGGGTCCTACTGGCGCAGGCATGCATGCGGTCACATCGGTGGTTACTACCGGTCCGGACGGCACGCCTATGGATGAAGTTAGTCAGCAGAGCACGCTCTCGAATGCATCGGCGGcATCCGGCGAGGATCCACAATGCACCACACCAAAGTCGCGCAAAAACGATCCATATAGCCAAAGTCATTTAGCACCTCCGAGCACTTCGCCACATCCTGTTGTCATGCATCCGGGAGGTGGAGCGCCAGGCGAGGAGTACGATATGAACTCGCCACCCAATTGGCCGCGTCCAGCTGGTAGCCCGCAGGTGTTCAACAGTCATGTGCCTGTGCAGCCGGAACCATTTCGTAGCACTGTTACTACCACCAAGAAATCGGATTCATTGTGCAAACTCTATGAGATGGATGATAATCCAGATCGAAGGGGCTGGCTTGATAAGCTGCGCGGCTTCATGGAGGAGCGCCGCACCCCCATCACCGCCTGCCCAACAATCTCAAAACAGCCACTCGATTTATATAGGTtatacatttatgtaaaaGAACGTGGCGGATTCGTCGAGGTATGCAAGGTGACCAAAAGCAAAACATGGAAGGATATTGCGGGTCTGCTGGGCATTGGAGCCAGCAGCAGCGCCGCCTATACGCTAAGGAAGCACTACACCAAGAATTTGCTGGCCTTCGAGTGTCACTTCGATCGTGGAGACATCGATCCACTGCCCATCATACAGCAGGTGGAGGCGGGCAGCAAAAAGAAGACAACAAAGGCAGCCTCAGTGCCATCGCCAGGTGGTGGTCATTTGGatgcggcaacaacaaattcgaCAGGCTCGTCGAACTCACAGGACTCATTCCCAGCGCCGCCCGGCGCTGCGCCCAATACTACAATCGATGGCTATGCAGGCTATCCGGGCGCAGGCGCCTACCCGGGAGCTGCCGGTCCGCAGCCGGATTATGGGGCCGCGGGCCAAATGCAGCGACCTCCATCTCAGAGCAATGCGCAGACACCGCATGCAGGCACACAAAATCAAACAGCCGCTGATAATATAAGCGTGAGCAATCCCTTTGATGATCCAATTGCTGGCGGTGTTGCCTCCGgcggagctgctgctgctggtgttgctgcaGGTGTTGGAGGCGGCGGTGGACCGAACCAACCACCACCCCCACAATCACCGCACGCCGCCGCATCCCAAGCGGGTGGTCATCCACAACAGCAATCGGGCTCAGCATTGCCGCCTTCGGCCCAACCAtcgcagcatcagcaacagcagcagccggcaggcgcaccaccgccaccacatGGGCCACCGGTGCCGTCGTCGCCGCAGCATGCGCGCCCCGCCACTGGAGCACCTTATCCGCAGGGTAGCTCTGGGTATCCAACGCCTGTGTCTAGAACGCCAGgTTCACCCTATCCCGCACAGCCGGGTGCTTATGGCCAAGCATATGGTTCGTCTGATCAGTACAATGCCACTGGACCACCCGGTCAGCCGTTTGGACAGAATCAAGGACAATATCCGCCACAGAATCGCAATATGTATCCTCCCTATGGGCCCGAGGGAGAAGCACCCCCAGCCGGTGCTAATCAGTACGGACCCTATGGCAGTCGGCCATATAGTCAAGCACCTCCAGGTGGACCACAGCCACCAGCGCAAGGCGTTGCGGGCGGACCACCGACAACGGGGGCACCAGTAGCGCCACCTAGCGGCGCCTACGCGCCAGGAACTCCCACACAGCAGGACTATTATAATAGGCCGCCAGAACAAAGTCCACAACCTCGACGACATCCCGACTTTGCCAAGGACTCACAGCCGTATCCTGGCTATAACACGCGACCTCTCTATGGTGGTTGGCCAGGCGGCACCGCGTATCGTCCTCAATACCCTTCCTCGCCAGCGCCACAGAACTGGGGCAATGCACCACCAAGAGGCACTGCACCACCCGGCGGTCCACATGTGCCGCCAAATCAACAGCCTGCCGGTGCAGCCCAATGGGAGCAGCATCGTTATCCGCCACAACCGGCACCTccgccacagcaacaacaaccgcctTATCAACAGGGTGCGCCACCAggacagcaacaaccacaagcaCCACCACAATGGGCACAGATGGGTGCTGTACCAGCGCCACAGCCTGGCATTGCACCACCCGGTTCACCATTGCGTGCGCCAGCCGGTGGAGCGCAACAGCAGCGTTTGCCTAGCGGTGTTCCGGGAATGTCgccgcaacaacagcagcaacagcaacaacaacagcagcagcaacaacaacaacagcaacaggggCAAGCGGTGCAACAACCACCGCATGTGGGCGTGCCCGCGCCAGGGATGCCGCCTGGAGCTGGGCCCATGGTCAAACCACCCTATGTAATGCCACCGCCTTCGCAGACGGCCGGCGCAACACCTGGCGTGCCtattggtgttggtggtggaCAGCCCGTACCAGTGGGACTGCCACCTGGCAGCATGATGCCACAAAAACCGTCAACAATGCcgccacagccacaacaacagcagccaccgCAACCCCATCAATTGCCACCCAATCAGCAGGCGGTATATGCGCCACCACAAGCACCCGGGCCTGCTGCCCAGTTGGCCAAGAAGGAGCTTATCTTCCCGCATGACAGTGTTGAGGCTACCACGCCGGTGCTCTATCGTCGCAAACGGCTGACCAAGGCTGATGTTTGCCCCGTCGATCCCTGGCGCATATTCATGGCGATGCGATCTGGTCTGCTCACCGAATGCACCTGGGCCCTGGATGTGCTTAATGTACTGCTCTTTGATGACTCCACTGTACAGTTCTTTGGCATCTCCCATTTACCCGGACTGCTGACATTGCTTCTGGAACACTTTCAAAAGAATCTCGCCGAAATGTTCGACGAACGCTGCGAGGAGGCGCTCGACGAGGCAGACGATGATACGGACAGCGGCACCGTGATGACAACACAGACAACGGAGAAGTCTGAGATGTCACAAAAGCTGCGTCGGCGGCAGCCACGTTGCGTGCGCAGCATTTGCAGCTATAATCGGAAACGTCACTATGAGAATATGGATGTGGCGAAACAACGTGGCGAAGATTCCGACGATGCCGACGAAGGCATCGATCTGGGACAGGTGCGTGTTCAGCCCAATCCTGAGGAGCGTTCGCTACTGCTCTCCTATACGCCCAATTATACGCTTATCTCACGGAAGGGCGTGCCAGTGCGGATACAACAGGCGCATCATGACATATTTGTCGATGAGCGCCAGAAGTCTTGGGATTTTGATACAAATAAACTGTATGAGCAACTGGAGCCGGTGGGCAGTAATGCATGGACCTATGGCTTCACGGAACCCGACCCTCTCGACGGTATTGTCGATGTGTTCAAATCGGAGATCGTAGACATTCCATTTGCTCGCTATATACGCGGCGACAAGCAAGCGAAACGAGAGCAGGCGGCGGCGCTTAAGAGCAAGAgtaatggcaatggcaacaatagCACAAAGGCAACCGAGGATCCGTCGTGTGTTAGCATTAAGCAGGAGGATAATACTGCAACCGGTACGGAAGAGAACAGTTTATTGCAGCAAAGCTACAACAAAAAGCGACGACTCGTCACAGTCGGCGGAAGCTCTGTTGTCCCAAGTGGGGAAGGGAAAAAGTCAAAGCTGGACGAAGAGTTTGCGCAGCCTGCGGTCGAGATCAAAAAGgagccaacagcaacagccgcaaCCACAAGTAGCGGTGGGAATTCAACGACCAGCGACAGTGACTGTCGTGCCGTTGACATGGATATTGATTCTCCACAGTCACAGacccagcaacagcagcagcaacgtcTTACCAATGGCATCGAAGCGTCGCCACTCAAAGGTTTTGATCCCAAGACGACAGTAAAGGATGTAGCGCAGGTGTTGCAACGTCGACGCGACTCCAGTTTTGAGGATGAATGCTACACTCGTGACGAGGCCTCGCTATATCTGGTGAATGAGAGTCAGGACTCATTGGCGCGTCGCTGCATAGCCCTGTCGAACATCTTTCGCAATCTGACATTTGTGCCCGGCAACGAAACGGTGCTGGCCAAATCCACCCGCTTTCTGGCCGTGCTCGGACACCTGCTGCTTCTCAATCATGAACACTTGCGGCGTACACCCAAAACACGCAATTACGATCGCGAGGAGGACACAGATTTCAGTGATTCGTGCAGTTCACTACAGGGAGAACGCGAATGGTGGTGGGACTATCTGATTACCATACGTGAGAATATGCTGGTAGCTATGGCTAATATTGCTGGCCATTTGGAGCTCTCACGCTACGATGAGCTCATTGCACGCCCACTTATCGATGGGCTGCTGCATTGGGCTGTCTGCCCCAGCGCCCATGGTCAGGATCCATTCCCTTCGTGTGGTCCGCATGCAGCGCTTTCCCCACAGCGTCTGGCTTTGGAGGCGCTCTGCAAGCTCTGCGTTACAGATGCCAATGTGGATTTGGTTATAGCAACGCCACCGTTTTCGCGTCTGGAAAAGCTGTGCGCCGTCCTCACGCGTCATCTGTGTCGCAATGAGGATCAGGTGCTGCGTGAATTCTCCGTGAATCTTCTGCATTATCTGGCTGCTGCCGACAGCGCCATGGCGCGCACAGTGGCACTCCAATCACCTTGCATATCGTATCTGGTGGCGTTCATTGAGCAGGCTGAGCAAACGGCACTGGGTGTGGCCAATCAGCATGGCATCAATTACCTGCGCGAAAATCCTGACTCTATGGGCACCAGTTTGGATATGTTGCGACGGGCAGCCGGCACGCTACTCCATCTGGCCAAACATCCCGATAATCGCTCGCTATTCATGCAGCAGGAGCAACGTTTGTTGGGTCTGGTCATGTCACACATACTGGACCAGCAGGTGGCTCTTATTATATCACGTGTGCTCTATCAAGTCTCCAGAGGTACGGGACCCACGCACTCCGTCGAATATCGATTGttgcaacagcgacagcaacaactactaAGACCTACAGCAGCATCAACGTCAACAACACTGTCAACGGCAGCTATTGCTACAGAAAAGCTTGCAACCTCCAGTCTCGCTGGATCATCGCTTGTGAAAAGCGAGTGCAACATCAAACAGGAACCCGCAACCGAATCTGCAAAGCCGCCAGCAGCTCCTGTCCAAGAcgagaacagcaacagcagtagccAGCAATTACCTCCGGCAGCAACATTTAACGatgtcagcaacagcagcaccaacagcaacagctgcggcaCCGCCAGCAGCAATctaagcaacagcagcagcctgGGCAGCATCAGCCAACAGGCCCCGCCCACACTTAACAACGTTGCTGCCACCAATTCGATGGCGCATTCAGACCAGACACATCCAGCTGTGGCTCTTGttggtggcaacaacaacaacagcagtaatagcagcagcaacagcagtagtgatcagcaacaacaacagcaacaattgcaactAGGCAAGGCGGCAGCAACATTGAGCAATTTGAATGCAGCAGCAACCGCTGCCAATacaacagctgcagcggcagcagcaaattcagcggcggcggcggcagcggcagcagcagccagtGTAGCACCCACACCACCTCCCCCTCCGCCCCCAGCGAATGCGGGAACAACGGCAGCCGTTGCGTAG
- Protein Sequence
- MNEKIKSPSSQGSSGAASGGAGGATAGAAAAAASGATPPTSGGPPTPNNGSDPNIQQGGGGVAPHPYGAPPPPPGGAPGAPPDPSAVMQHYHHLHQQQQQQQPPHPQGPPPPHMQHHGGPPPPQGPAPPPGGPEHTPGVKDDYGGPHLPPPPGAQHPHAHPAYGRYHAGDPNMDPYRYGHPPMQQPPPGGKPPPPHQQQQQQGTGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYANSYDPQQAASAAAAAAAAAQQQQQQQHQQNAQQPGGPPPPPQHQPYGAQQGGWAPPPRPYSPQLGPSQQYRTPPPTNTSRGQSPYPPAHGQNSGSYPSSPQQQQQQQQAAQQQQQAAQQQQPGGVGAAGAPAPPPGASQQPQQQQPQQTTPPASQYSPYPQRYPTPPGLPGSGPNHRTAYTTHQYPEPNRPWPGGSSPAPSPGPGGHPLPPASPHHAPPQQQQQQPPPPPHATAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGMGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSGGGPMQQPPVGAGPPPMPPHGLPGVPPQQQQQQQQQQQQSQPQQASNSASSASNSPQQTPPPTAQPNQSINNMATPPPPQGAAGGYPMPPHLIGTYKMGGPGQSPGAQGYHPPQQPQQYAQGNYAPRPQYPPGAYATGPPPPPTSQAGGVGANNMPPGAQAGYPGRPMPNHSGGSPHAPYPPYQWVPPSPQQSVPGGGAPGQVGNHVQNKGTPPPVGPPPTQGGGSPRPINYLKQHLQHKGGYGASPTPPQGYGNGPAGMHPGMPMGPPHHMGPPHGPTSMGPPTSTPPQSMMGAQAGSDSGPPEHISQDNGISSSGPTGAGMHAVTSVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKNDPYSQSHLAPPSTSPHPVVMHPGGGAPGEEYDMNSPPNWPRPAGSPQVFNSHVPVQPEPFRSTVTTTKKSDSLCKLYEMDDNPDRRGWLDKLRGFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAASVPSPGGGHLDAATTNSTGSSNSQDSFPAPPGAAPNTTIDGYAGYPGAGAYPGAAGPQPDYGAAGQMQRPPSQSNAQTPHAGTQNQTAADNISVSNPFDDPIAGGVASGGAAAAGVAAGVGGGGGPNQPPPPQSPHAAASQAGGHPQQQSGSALPPSAQPSQHQQQQQPAGAPPPPHGPPVPSSPQHARPATGAPYPQGSSGYPTPVSRTPGSPYPAQPGAYGQAYGSSDQYNATGPPGQPFGQNQGQYPPQNRNMYPPYGPEGEAPPAGANQYGPYGSRPYSQAPPGGPQPPAQGVAGGPPTTGAPVAPPSGAYAPGTPTQQDYYNRPPEQSPQPRRHPDFAKDSQPYPGYNTRPLYGGWPGGTAYRPQYPSSPAPQNWGNAPPRGTAPPGGPHVPPNQQPAGAAQWEQHRYPPQPAPPPQQQQPPYQQGAPPGQQQPQAPPQWAQMGAVPAPQPGIAPPGSPLRAPAGGAQQQRLPSGVPGMSPQQQQQQQQQQQQQQQQQQQGQAVQQPPHVGVPAPGMPPGAGPMVKPPYVMPPPSQTAGATPGVPIGVGGGQPVPVGLPPGSMMPQKPSTMPPQPQQQQPPQPHQLPPNQQAVYAPPQAPGPAAQLAKKELIFPHDSVEATTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISHLPGLLTLLLEHFQKNLAEMFDERCEEALDEADDDTDSGTVMTTQTTEKSEMSQKLRRRQPRCVRSICSYNRKRHYENMDVAKQRGEDSDDADEGIDLGQVRVQPNPEERSLLLSYTPNYTLISRKGVPVRIQQAHHDIFVDERQKSWDFDTNKLYEQLEPVGSNAWTYGFTEPDPLDGIVDVFKSEIVDIPFARYIRGDKQAKREQAAALKSKSNGNGNNSTKATEDPSCVSIKQEDNTATGTEENSLLQQSYNKKRRLVTVGGSSVVPSGEGKKSKLDEEFAQPAVEIKKEPTATAATTSSGGNSTTSDSDCRAVDMDIDSPQSQTQQQQQQRLTNGIEASPLKGFDPKTTVKDVAQVLQRRRDSSFEDECYTRDEASLYLVNESQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGHLLLLNHEHLRRTPKTRNYDREEDTDFSDSCSSLQGEREWWWDYLITIRENMLVAMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPHAALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLVMSHILDQQVALIISRVLYQVSRGTGPTHSVEYRLLQQRQQQLLRPTAASTSTTLSTAAIATEKLATSSLAGSSLVKSECNIKQEPATESAKPPAAPVQDENSNSSSQQLPPAATFNDVSNSSTNSNSCGTASSNLSNSSSLGSISQQAPPTLNNVAATNSMAHSDQTHPAVALVGGNNNNSSNSSSNSSSDQQQQQQQLQLGKAAATLSNLNAAATAANTTAAAAAANSAAAAAAAAAASVAPTPPPPPPPANAGTTAAVA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -