Basic Information

Gene Symbol
Ubp1
Assembly
GCA_003285725.2
Location
NW:7434167-7447266[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-53 7e-50 168.9 0.6 16 187 381 547 366 555 0.89
2 2 1.9e-13 1.3e-09 37.3 0.2 189 222 596 630 581 631 0.86

Sequence Information

Coding Sequence
ATGGCGCTTTCGATTATATCGCAAAGTTCCGGTCTCTTGGATTTGCAAAGCATTTTTGATCCTCAATATtcgttgcaacaacaacaagaagttAGTTTGCAAGAACAAACACAATTACTGCAAGATTCGGCACGGCCATTAacgaaatttgatttaaacattttcaacgATATCGGCCAAATGGAATACACTACAAATTTAAATCGAAGTCAAAACCAATAtcagaataataataatatccacaATAATcagaatagcaacaacaacattcaaACACATCAGACCAACGGTGATAACATTAATCAGATCCAGAGTCGTCATTTTATCAGTGGctatcatcatcagcatattGGATCCGATTATGAGCAAGTTATTAACTTTGTAGACTCGCCACCGAACTCTGAGGAATCCTGGACAGACGTACAATCGAAGGAATCTCCAGGACCACAAATTATCGACGTACAAACGATTTATTCAAACAGTGGATCACGCAAGAGACGAATGGATTGGGACTCGTTAGATATTGGTCAAAGTGAAAACTCACCGACATCGCAAAACGACGAAATACCGTTACCCAACAAAGTGGCACATCAGGAGAAAGATAAACATAAGCGGGAAAAACACTCAGGTCGCAGCAGTTGGAGCGATGATATAggatttgatttaaatgccgATTTCAATAGCAACTCGTATTTGAACAATGACAATTTTCTATCCTTCTCCCCGAGCCTGACGGCACTAAAGCAGGAGCCGCAAATCGATCACCTGAAGCCCCACACAAAGATTCCCCTGATCAGCGGCAACAAACTCGAAAAATCACCACTCGGCAGCGATTCGAATAACTCCCCGCAGCACTCTTCGCAAGACTTGGACGCGTCTACGATCGCtggtggcagtggcaacaaaaacaagcatGAGTTGAACACTGGCCTCACCTGCGGCTGTGGCTCCCCACAAGGTTCGCCCGCCGCTCCGGATTTTGAATTGAACACCAATGCTAATGCCAATGGAAATGGCAATGCACCGTCTGGCGATAACTCGAGCGGAAATCTCGTTGGTAGCGCGGCCTACAATCAGGCGGCACACGCCGGTCCAATACAGCTGAATGTTGTCGAGGCGGCCAAAATAGAGCCCAGTTCGGCAGGCAGCACAGCAGTGCACTCCGAAGACCATAAgtttcaatatattttggcTGCGGCAACATCCATTGCTACGAAGAATAATGAGGAGACTTTGACCTATTTGAATCAGGGTCAAAGCTATGAGATAAAATTGAAGAAGATCGGCGATCTATCTTTCTATCGCGATAAGATTTTGAAGAGTGTCATCAAGATATGTTTCCACGAGCGTCGGCTGCAGTTTATGGAGCGCGAACAGATGCAACAATGGCAAGCATCCCGACCTGGCGAACGCATCATTGAGGTGGATGTTCCGCTCTCGTACGGGTTGTGCCACGTTTCGCAGCCCCTTAACTCAAACTCGCTGAACACTGTCGAAATATTTTGGGATCCATTGAAGGAGGTCGGTGTCTATATCAAGGTCAACTGCATTTCAACCGAATTTACACCAAAGAAGCACGGTGGAGAAAAGGGTGTACCATTTCGACTACAAATTGAAACTTATATAGAAAATACTAACAATACTAGTAACATAaccagcggcaacagcagcggcagtggcattAACAACGCTTTGGTCCCATCACCGAGCGGCACCCCGAACGATAATGCCAACAGTTCTACAGCCAGTTCGAATACTTCGACAACCCTGGGCGCACTCAACGGCAAACTGGCCGTACATGCAGCTGCCTGCCAGATTAAGGTTTTTAAACTCAAAGGCGCAGATCGTAAGCACAAACAAGATCgagaaaaaattcaaaagcgTCCACAATCCGAACAAGAGAAATTTCAGCCCAGCTACGAGTGCACAATTATGAATGATATATCGTTGGATTTGATAGCGCCAACTGCCACTGGCTCATACAGTCCCGAGTATATGAAAATCTGGCCTAATTCGCCAGTGCATATACCGAAATATGATGGCATGTTGCCCTTTGCCAGCGCATCTCCAGCGAATAGCAGCAGCCCGATAGCAATTAATTCGGTGACATCAACTAATTCGCCAACTTTGAAACTAATGGATGCGACCAACATGGTGTCGCCACAACATGTGCCGGCGGATATTGATGATTATAATGTAAACATAATGCCGGACTCAACACCCGCTCAAGTGACACAATGGCTGACCCAGAATCGTTTGACTGCCTATCTTACAACATTTTCGCAGTTCTCTGGTGCCGATATTTTGCGCATGTCCAAGGAGGACCTGGTACAAATTTGCGGTCTTGCCGACGGCATACGcatgtttaatattttgcgCGCTAAAACGATTGCACCCCGTCtgaccctttacgtgagtctGGATGGTTGTAGCTACAATGCCATCTATTTGCTGTCGAACACGGCAAAGGAGCTCCAACAGAAACTGTACAAACTTCCCGGATTCTACGAGTTTATGTCAAAGACCGTCAGCAATGGCGGCGTGCTGGAGAATGGATCAACGGTGTTCAACAATTGGGGCATGCATTCAAAATATTCGGGAAGCGGTTCCAACATCTTCAGCGAAGTGAACAAGTGTTGTGTCTACTTATCTGGTCCAGGCGGCGTTCATGTAACCATCACCGATGAGGTACTCAACAATGAGGTTAGGGATAGCAGCTTGTATGCGATGGACGCACAAGGCGGGAAAGTAATTCTGAAATTGATAAATAAGCaggaaaataattga
Protein Sequence
MALSIISQSSGLLDLQSIFDPQYSLQQQQEVSLQEQTQLLQDSARPLTKFDLNIFNDIGQMEYTTNLNRSQNQYQNNNNIHNNQNSNNNIQTHQTNGDNINQIQSRHFISGYHHQHIGSDYEQVINFVDSPPNSEESWTDVQSKESPGPQIIDVQTIYSNSGSRKRRMDWDSLDIGQSENSPTSQNDEIPLPNKVAHQEKDKHKREKHSGRSSWSDDIGFDLNADFNSNSYLNNDNFLSFSPSLTALKQEPQIDHLKPHTKIPLISGNKLEKSPLGSDSNNSPQHSSQDLDASTIAGGSGNKNKHELNTGLTCGCGSPQGSPAAPDFELNTNANANGNGNAPSGDNSSGNLVGSAAYNQAAHAGPIQLNVVEAAKIEPSSAGSTAVHSEDHKFQYILAAATSIATKNNEETLTYLNQGQSYEIKLKKIGDLSFYRDKILKSVIKICFHERRLQFMEREQMQQWQASRPGERIIEVDVPLSYGLCHVSQPLNSNSLNTVEIFWDPLKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIENTNNTSNITSGNSSGSGINNALVPSPSGTPNDNANSSTASSNTSTTLGALNGKLAVHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQEKFQPSYECTIMNDISLDLIAPTATGSYSPEYMKIWPNSPVHIPKYDGMLPFASASPANSSSPIAINSVTSTNSPTLKLMDATNMVSPQHVPADIDDYNVNIMPDSTPAQVTQWLTQNRLTAYLTTFSQFSGADILRMSKEDLVQICGLADGIRMFNILRAKTIAPRLTLYVSLDGCSYNAIYLLSNTAKELQQKLYKLPGFYEFMSKTVSNGGVLENGSTVFNNWGMHSKYSGSGSNIFSEVNKCCVYLSGPGGVHVTITDEVLNNEVRDSSLYAMDAQGGKVILKLINKQENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-