Sleb006159.1
Basic Information
- Gene Symbol
- Xbp1
- Assembly
- GCA_003285725.2
- Location
- NW:20489145-20491602[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-15 1.9e-12 46.6 10.4 2 60 83 141 83 142 0.95 2 2 5e-05 0.039 13.6 7.3 25 64 120 159 120 167 0.91
Sequence Information
- Coding Sequence
- ATGGCGCCACCTAGTAACGGAGTGGTCATTCCTATGCCCAAGTGCGTAGCAATTTCATCAAACAGCTTGCCCAAGCTGCGCCCCGCACCCATCTCTACAGCTGTGCTCAAGAGTCTGGGTGCTGCGTCACCCGCCTCCACTTCAGGCTACGCATCATCGTCCAACAGCGTTGTTGAGGAGGAGCAAATGGCAGGAAATTCCTCAGCCCCAAAGGCGAAGAAGCGCCGCTTGGATCATCTGACATGGGAGGAGAAAGTTCAGAGAAAGAAGCTTAAGAATCGTGTGGCCGCGCAAACATCACGAGATCGCAAAAAGGCACGCATGGAGGAAATGGAATTTGAAATCAAGGAGTTAACCGAGAAAACTGAAATCCTACAAAACAAATGTGAAAGTCTACAGACCATCAATGACGCACTGCTAGCTAAAAATCAAAAGCTAGATACAGAAGTGGAATTATTGCGTCAGGAACTTTCCGAAATGAAACAGGCCACAAACcaatgcaacagcagcagcagcagcatcgccAGTGCAAACGCTGATGGCTGTGCGTCCATAAACACTGGACGCAGTATCCAATACTGACCCTCTGCAGCAGGGTATAAACATGGACACACAGTCGTCAGCGAGTGCATTGACGACATCGCAGTTGCAGGAGCAGCTGAAAAAGAGCAGCACAACAGCCTCGCTCTGGAAGATTGTGGCCCTCTGCCTACTTTACAAGACATGCTGCTCGTCGACGACGAAGAGTTCGATGCGCGGCGGCTTGAAGAGCTGGCAGAGAGTCTGCTCGCAGATATCACAGCAGAATTGGAGACAGGCACTGGAAACAGCTGCAAAACTTCTGCCAAAGATGCAAGCGACGCAGAGCGATTGCCTGGATCAGTGGTGGGGCCCGCAGCAGAGTGCGTGGAATCCAGCAGGCATAGAACTGATGGCATAACCACTGCAAGCTCAGCCCCCAATCCGGATAATGAGCATGTCGTTAATGATATAACCCCCCCTCTATTACAAACAAACGGCAGCAACCTAGAATTGCAGGTGTTGCACATAAATGGAAACTTACAAGAAGATACAGTTGTGGCAACAACGACATCAACAGTTCCAGCAGCTATGCAGCCTACACCGGATACCGTGTACGGCACCTACGATGCCAAAACAAATTCGATAACCATTGTCATGGATGGCGATGCGGTGCCGGTTAATGAAGCCGTCGAAGAGATATACTGTGAGGGCGTTGCCGCCACAGACGATACTACCGATGTCATCATGAAGTGTCCAACGCCGGCGACATCTCCCTCACAGGTTTATCTCAATGTCGTCAATGCGACCGACGATTCGGATGACGATATGAACTTTGATCCAATTGAGAAGTTTCTCCGCCCGCGTATTAAAGCCATCTCACCATTGGCCAAATCACCAGCGTTATCGCATTCAGCAATCTCGGATCATGGGTACGAGTCAATAATGGGCTCACCGACATCTACAACTATATCACAATTTGATATTGAAAGCACAATGCCCACAGATGACGAGGATTTCCCCTGGCACAGTAATTTTGATGAGCTATTCCCTAATTTGAATTCGTTGTGA
- Protein Sequence
- MAPPSNGVVIPMPKCVAISSNSLPKLRPAPISTAVLKSLGAASPASTSGYASSSNSVVEEEQMAGNSSAPKAKKRRLDHLTWEEKVQRKKLKNRVAAQTSRDRKKARMEEMEFEIKELTEKTEILQNKCESLQTINDALLAKNQKLDTEVELLRQELSEMKQATNQCNSSSSSIASANADGCASINTGRSIQY*PSAAGYKHGHTVVSECIDDIAVAGAAEKEQHNSLALEDCGPLPTLQDMLLVDDEEFDARRLEELAESLLADITAELETGTGNSCKTSAKDASDAERLPGSVVGPAAECVESSRHRTDGITTASSAPNPDNEHVVNDITPPLLQTNGSNLELQVLHINGNLQEDTVVATTTSTVPAAMQPTPDTVYGTYDAKTNSITIVMDGDAVPVNEAVEEIYCEGVAATDDTTDVIMKCPTPATSPSQVYLNVVNATDDSDDDMNFDPIEKFLRPRIKAISPLAKSPALSHSAISDHGYESIMGSPTSTTISQFDIESTMPTDDEDFPWHSNFDELFPNLNSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -