Slat003796.1
Basic Information
- Gene Symbol
- pnr_2
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000100.1:22500649-22502941[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.039 80 3.2 0.1 23 31 432 440 424 443 0.88 2 2 1.1e-17 2.3e-14 52.9 7.8 1 35 481 514 481 515 0.97
Sequence Information
- Coding Sequence
- ATGGAACCACAGACaacgcagcagcaacagcagcagcagcagcaacaacaacaattgcaacaaccacaacagcaaGTGCTTAGCAAAGATCGTCTTGAACTACTGGATAAGATCAAGAGTGAGAACAATATTGGCGGTGAACAATTGAGCCAGCAAACTAACACTTCTGCTGaagagcagcagcaatcacaggagcagcaacaacaacaaactattACTTCCAGTGGAGTGGTAGTGCCCACAAGTCAGCCCTGTGTAACGGAAGCGGAAGAGCAACACCAAAAATACGTACAGCGTCGCATTATAACCACTCTGGGCACCCTTGAGGTCCGTGAGGGTGAgtccagccaggcagccaacagcaacagctccGGCTCAGCAGCCGAGCCAGCCCACGGGGAATACCAACTTAGTCATCACTCTCCGGTTAGGCAATACGTCCATATGGCTCCGAGAAATGCCGAGGAGCAAGCGGCTGCCTCTGCTGGGACCCTGGTGGCTACCTCAGGCGGTCTGTACACCACCTACCCAGGCCAAATCATATGTGCTGCCGATGACGGCACGGCTATTAAAATTGAGGCCATCGACAAGTCAGAAGTTCCTGTAGAAGTCCAGGCGCAGGCCCTGCagttgcagcagcaacaacatcagcatcaGGCCTACGCCGATACGCTAGTAATATCCAATGAGAGTGGCCTGCAGCTTCATCAGAATACCGCGGCCATTCAGTCGGCAGCCCATCCCAGTGGCCATGGCAGTGTGCGTTTGATGACTGATGATGGTCGCTTTGCCACCGCCAGTGGCGAGACGGAGGCCAATGGTGGCACTTTTTGCTATGAAAACACAGTAGTGGATACCACTGGCCATGATCCCAAGACCTATGCCGATTTGGGCACTTATACATACGCGTCGACGCCTCCATTTGCCACCAGTAGTGCCTATGCAACTGCCCTGCCGCAGGGGAATGCAATTTATAGTGTGCCAACCTCAACACAGTTCATCACCAAATCCGATCCTAATATGAACCCTCTGAGACAGACTGGCGGAGTTTACTCCATGTTCTTGGATGCACCCAATCCCAATGAGCCCACCATTTGGTCAACAGCCACTGCGGAATATCAAAACGTAGCCTATTCTAACTATCATTCCCAGGTGAATATGGATGAGTATTCCGCGGGTAACATGGCTCCGGCCCACTGGCCACCGGCAACGAGCATAAACAATTATGATGCCATGGCAGTGGCAAGCTCTGCGCCTGGTTCCCTGGGTGCTGGAAATATGTCGGAAATCAAATGTGAAGCTTGCAACACTTACCATAAGGGCCCTGAAGATATCTGCCCCACCTGCCCAACGTATTCCCGCATACCTCAGCGTATGCACCAACGTCAACCTAAGCCAAAAGCGGCAGCGGCCCCCAGCAGTCGACGTACCGGAGTAACCTGTGCTAATTGCCAGACCAATTCCACGACTCTCTGGCGACGCAACAATGATGGCAATCCCGTCTGCAATGCCTGCGGTCTGTATTATAAACTGCATAACCAAAATCGTCCCTTGTCAATGAAAAAAGATGGCATACAGAAACGGAAGCGTAAGCCTAAAAACAATGCTGGTCAGCCAATGCACGGCCGGCCTTTGCCAAGCATAACGCAGGGGGTTCCACTGGTGGCTGGTTCTATATATCCTTCGCAAGTGACAGCCATGTTGAATGGACAGCACAATCCGAGTCCGGAACTTCATGATATGTCGACAACGGGTCAGGCTGCTCTAACTGTAAATAATTCACGCATCGTGGCCATTGTACAGGCGCCAACCTCAGAGTCGGGTATAGCTGGACAGAATGTAGCACGTCATCATGTGACCAGTGAAAATCATTCGCAGTACAGTCAGCCCCCAGCTCAGAGTCAATCTCCCCATCTACCGAGTTCGGCCACACTCAATCGTCAGATTGCTCAAACAGTGCCTTCAATTGAGAATAGTCGAAGCTCAAATGGTGAGCTGACACCCAGTGTTATCACCCGTACGGGCTTACCGGAGCGTTCATcgaataactaa
- Protein Sequence
- MEPQTTQQQQQQQQQQQQLQQPQQQVLSKDRLELLDKIKSENNIGGEQLSQQTNTSAEEQQQSQEQQQQQTITSSGVVVPTSQPCVTEAEEQHQKYVQRRIITTLGTLEVREGESSQAANSNSSGSAAEPAHGEYQLSHHSPVRQYVHMAPRNAEEQAAASAGTLVATSGGLYTTYPGQIICAADDGTAIKIEAIDKSEVPVEVQAQALQLQQQQHQHQAYADTLVISNESGLQLHQNTAAIQSAAHPSGHGSVRLMTDDGRFATASGETEANGGTFCYENTVVDTTGHDPKTYADLGTYTYASTPPFATSSAYATALPQGNAIYSVPTSTQFITKSDPNMNPLRQTGGVYSMFLDAPNPNEPTIWSTATAEYQNVAYSNYHSQVNMDEYSAGNMAPAHWPPATSINNYDAMAVASSAPGSLGAGNMSEIKCEACNTYHKGPEDICPTCPTYSRIPQRMHQRQPKPKAAAAPSSRRTGVTCANCQTNSTTLWRRNNDGNPVCNACGLYYKLHNQNRPLSMKKDGIQKRKRKPKNNAGQPMHGRPLPSITQGVPLVAGSIYPSQVTAMLNGQHNPSPELHDMSTTGQAALTVNNSRIVAIVQAPTSESGIAGQNVARHHVTSENHSQYSQPPAQSQSPHLPSSATLNRQIAQTVPSIENSRSSNGELTPSVITRTGLPERSSNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -