Basic Information

Insect: Scaptodrosophila latifasciaeformis
Gene Symbol: -
Assembly: GCA_037075145.1
Location: JBAMCM010000409.1:93406-95462[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 1.1 93 4.0 1.5 1 19 373 391 373 395 0.88

2 7 0.00011 0.0092 16.6 1.5 1 23 401 423 401 423 0.98

3 7 1.5e-05 0.0013 19.3 1.8 3 23 431 451 430 451 0.97

4 7 0.00066 0.056 14.1 8.7 1 23 457 479 457 479 0.97

5 7 3.9e-05 0.0033 18.0 1.7 2 23 486 507 486 507 0.97

6 7 1.4e-05 0.0011 19.4 0.9 2 23 514 535 513 535 0.96

7 7 6.7e-06 0.00057 20.4 0.1 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	1.1	93	4.0	1.5	1	19	373	391	373	395	0.88
2	7	0.00011	0.0092	16.6	1.5	1	23	401	423	401	423	0.98
3	7	1.5e-05	0.0013	19.3	1.8	3	23	431	451	430	451	0.97
4	7	0.00066	0.056	14.1	8.7	1	23	457	479	457	479	0.97
5	7	3.9e-05	0.0033	18.0	1.7	2	23	486	507	486	507	0.97
6	7	1.4e-05	0.0011	19.4	0.9	2	23	514	535	513	535	0.96
7	7	6.7e-06	0.00057	20.4	0.1	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGAGTGGGCAGGTCGACAATTCCGACTTTCAACGGTGTGGGGACATCGTCTTGCAGTGGAATACCCGAAAATCCACACGCACCTACGCTTTTAAATGTCGTTTTTGTGGGAAAACAGCGcttatatttaaaaagtttaaacaGCATCTGGAGCAACATGCCGAGGAACTAAAACAATTGGTTAGTCAGGAGGCAAAACTTGAGGATGTAGCAAAAACAGAAGATAGAACAGAGCCAATAGTAGATACAAAGTTTGAGGCAGATCCTCTAATTTCCAATGAGAATATTTGCCCAGAAACCAATAGTCCTGAATTGGAGAATGATGGCGAGGGCGAAATCGGTGACTCGGACAGTCCAGGAGCAACTGTTAGCCTTGACGACACTGATCAAGAAATGCCACCTGCACCTCCACCACTCACAGGCAACACCGACTTTTGGTTACGCGAGCATCCCATAATGTACTCTCTTATTGACCAGTATGCCGAGCTGCCCGTCTTATGGAAGTGGAGCTTAAATATGTACAAAGGTGCTCAGCGGCGAGAGGAAGCCTGTGATCAAATAGCCAGTAAATTGGAGCAAGAGTTTGATATCAAGCTAACCAGCCAAGATGTGAGTCTCTATCTCAAAAGACTGCGATGTCTATATGTTGGAGAAAAGCGTCGAATTCTAGCCGATCCCAAACGCATTTCTCCCTGGTACTACGAACGCTTGAGTTTCTTGGGCGAAAGCAGCGAACGCAGGAAACGCGGCATACGTGGTACAAAGTCTTGGGCCGCTCACCTATCCGCTTTGCCAGTGCCACAACTCAGTCATGAGCAGAACTGTCGATTCATCGAGCTCTATCGCACCTGTGAGCGCCTGTGGGACATGCAGAATATCTCCTATCGCCTGCGCCATGTACGTCAGGAGGCCAACGATAAGCTCCTCCAGCTTTGTCGCACCGAGCTAAAGCTGGACATTAATGACGACCAGCTGCAGGGGTTTATCTATCGCATACGCTATGCCTGCACCCAGGAAAAGACTCGCAAACTCAGGTGTCTCAAAGACGGACGCCCCTTCAAGTCACGTTGTCACTACTACAAACAGATTCAATTTCTGGTGGATCATGTGGGCCCTTTTAAGTGCGACGTCTGCAATGAAGTGCTCAGTGGAGTTGACAAGTTCAAATTGCATTGCTCCGAGCACGACGGTAGTCTGCCATTCATCTGTCCTGTCTGCCAACGGGGCTTCTCGCGCAGCGGCAACTGCATCACCCACCTGCGTCGTCACACCCAGGACTACCATGTGGCCTGCACCGAGTGTGGCAAACGTTTTGCCACCACCACAGAGCTCCAGGTTCATCGACGTCATCACACCGGCGAGAAACCCTTTTGCTGTGATGTTTGCGGTCAACGTTTTCGCACTCACTCCTTCTTCAATCGCCACAAGCGACGACATGAGCAACGCCACCAGGGCAGGTGTGATATCTGCGGCAAATGCTTCTTTGAATCCTCTGTGCTCAAGGATCACATGAAGGCCCATCTGAATGTGCGTGACAAAGTCTGTGATATCTGCCAGAAGACCTTCACCAGTGCCAAATACCTGCGCCAGCATAAGGAAATCCATGCCGAACACAAGCGATACAATTGCAAGATCTGTGGCAAGGGATTTGCCCAATATGCAGGTCTGAGTGGTCACATGAAGTCGCATGGCACCACGGTCAAGGGTACCGTGCATCCAACCACTAATGTGTCAGGTGAATTGAATACAAATGAAGTCAATCCGAAGGCAATGGAAGATAGTCACAAATTGGTTGAAAATCAAAAGGATTATGGATCCTCTGTGGACGCGGCAAAAGAGGCATCCGCTTAG
Protein Sequence: MSGQVDNSDFQRCGDIVLQWNTRKSTRTYAFKCRFCGKTALIFKKFKQHLEQHAEELKQLVSQEAKLEDVAKTEDRTEPIVDTKFEADPLISNENICPETNSPELENDGEGEIGDSDSPGATVSLDDTDQEMPPAPPPLTGNTDFWLREHPIMYSLIDQYAELPVLWKWSLNMYKGAQRREEACDQIASKLEQEFDIKLTSQDVSLYLKRLRCLYVGEKRRILADPKRISPWYYERLSFLGESSERRKRGIRGTKSWAAHLSALPVPQLSHEQNCRFIELYRTCERLWDMQNISYRLRHVRQEANDKLLQLCRTELKLDINDDQLQGFIYRIRYACTQEKTRKLRCLKDGRPFKSRCHYYKQIQFLVDHVGPFKCDVCNEVLSGVDKFKLHCSEHDGSLPFICPVCQRGFSRSGNCITHLRRHTQDYHVACTECGKRFATTTELQVHRRHHTGEKPFCCDVCGQRFRTHSFFNRHKRRHEQRHQGRCDICGKCFFESSVLKDHMKAHLNVRDKVCDICQKTFTSAKYLRQHKEIHAEHKRYNCKICGKGFAQYAGLSGHMKSHGTTVKGTVHPTTNVSGELNTNEVNPKAMEDSHKLVENQKDYGSSVDAAKEASA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -