Basic Information

Insect: Scaptodrosophila latifasciaeformis
Gene Symbol: -
Assembly: GCA_037075145.1
Location: JBAMCM010000132.1:4013853-4018541[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0008 0.068 13.9 0.6 1 23 154 176 154 176 0.97

2 12 1.8e-05 0.0015 19.0 0.9 1 23 405 427 405 427 0.99

3 12 0.13 11 6.9 1.0 1 23 476 499 476 499 0.96

4 12 0.0022 0.19 12.5 3.2 3 23 717 737 716 737 0.95

5 12 0.068 5.7 7.8 0.4 1 23 743 766 743 766 0.96

6 12 0.0027 0.23 12.2 0.6 1 23 850 873 850 873 0.97

7 12 0.36 30 5.5 0.8 1 23 1036 1059 1036 1059 0.87

8 12 0.00097 0.082 13.6 6.5 1 23 1072 1094 1072 1094 0.99

9 12 4.4e-06 0.00037 21.0 0.3 1 23 1099 1121 1099 1121 0.99

10 12 0.00012 0.01 16.4 5.1 1 23 1127 1152 1127 1152 0.96

11 12 0.0054 0.45 11.3 1.2 1 21 1157 1179 1157 1181 0.94

12 12 2.2e-05 0.0018 18.8 1.1 1 23 1187 1210 1187 1210 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0008	0.068	13.9	0.6	1	23	154	176	154	176	0.97
2	12	1.8e-05	0.0015	19.0	0.9	1	23	405	427	405	427	0.99
3	12	0.13	11	6.9	1.0	1	23	476	499	476	499	0.96
4	12	0.0022	0.19	12.5	3.2	3	23	717	737	716	737	0.95
5	12	0.068	5.7	7.8	0.4	1	23	743	766	743	766	0.96
6	12	0.0027	0.23	12.2	0.6	1	23	850	873	850	873	0.97
7	12	0.36	30	5.5	0.8	1	23	1036	1059	1036	1059	0.87
8	12	0.00097	0.082	13.6	6.5	1	23	1072	1094	1072	1094	0.99
9	12	4.4e-06	0.00037	21.0	0.3	1	23	1099	1121	1099	1121	0.99
10	12	0.00012	0.01	16.4	5.1	1	23	1127	1152	1127	1152	0.96
11	12	0.0054	0.45	11.3	1.2	1	21	1157	1179	1157	1181	0.94
12	12	2.2e-05	0.0018	18.8	1.1	1	23	1187	1210	1187	1210	0.96

Sequence Information

Coding Sequence: ATGCCAAATAGAGCCATGAAAATAGAGGAACCCGTCGATTTCAAGTTGGCGTGCCGATGCTGCCTCAAGTCAGATGTAGAATTCTTCAAGCTGGATTCATATACCGTGGCGCGAAATATAGAAAACTACGATATAAATGATGGTGGTACTACTGATCGGATTTCTCTGCTTCGATGTTTGCTTTTCTGCATACGCACCGAAAACATGCCAGAGCTGCCGCAATATATTTGCGTCGCTTGTAGTAAGAGCCTGCAAATAACGTACCATTTTCTTCAAAACGCCATGCGTGCTCATGAGATTCTATGCCACAAGCTGTGTccagaaaaagtgaaaacgcAGCGAAATGCTCAGATCAATGGCCAATACAGACTCCACCAGTCTGAGCCAAAAAGAACAGAACTTCTGAATAATGCCAAAGTTGAACGGACACCCCAGgataaatctcaaaaaaatgaGCGCCATAAATGCAAAGTTTGTGGAGAAGTTATTTTTGATAGAGCAGAATTAAAGCAGCATATATTTATGCACATGAatgaGCTTGGCTATGTGTGCAGATTGTGCAGTTTTCCGACATTACAGAAGTGCGATATAATCAAACATTATCGAACCAAACATGGATTGACGCAGCGCGAAGCTGAAGATCAATTAAAAAGGGGAAACGATAATTCAATTGCAACCTCGACAAACAATACCACTGGGACTACTAGCAGCACCAACTTAACGAAAACCTCCGAACCAGTGGTAAAGGTGTGTACTTTAGAAGATATGGAATTACTGATTCCAACTGTGTTACGCCCAGAAGACTATGAGCAGCCAAAAATTGAAGTTGGTACCGATGAAATGCAAGACAATGAAGATCAGTCAAATCAATATACAGAGCTTAAGGGGAATGTTATTGATACAGTAGATTTTCAAGAAATATCTGATTATAACATAAATAACTCCAACGATTTGACCATAGGCACAGAATTTCTGGTTATGCCTGATGGTTCGCTCCAACAAATGGACACGAGTGGATTTCTTATTGAGTACATCAACGAGACCGGAGAAGaagtacaaaaacaaatctcagATATTGATGTTGTATCGAAGGAACCAGCAGAAGCAGCTAATGAAATTGCTACACCCATGGATGTTGACATGTCATCCGATCTTATTATAGAAGAAGTAATGTCTCCAATAAAAGCCAAGCCTAGTCGTTCACCCCTGAAGTACAAGTGCCGATTGTGTCCGAAATCGTTTGCAACAGAAGCACGTCTCAAATCCCATCAACTAACACACAGCAATCTTCCCAAGTTCTACTGTGAACAGTGTGCCTTTTATACACTCCGTGTACCCGATCTCATACAGCACTACAAGGTGGAGCACAAGCTTACCCCATTGGATAGGAAAAGATCATTGTTACCGTTAGCCCAAAACAAACTCTTTTCCTGTGATATGTGCTTGTACGAGACACGCAGCGTTGGACAGCTGCGAAGTCACTACAAATTAAAGCATTTTATACAACCGACTGAAATTCAGTTGCGGCCAAGTTGGTGCGACGATAAAGACGAACAAGCAAGCACTTCTAGTAATTGTCAGTTGAGAACCACAATACAGACACAACCTTCTGATTTTCCATTGGGCATCACTTatcCACGCAATATTGTAAAGGACATAAAACAAGAAGAGCAACCATTACCAGTCCAGATggggcccaacgaaaccattACAACAAATGAATTGCATGCGGAAGCAACTTCCAGCATGTCGGATTGCACTCAAGAGTCTCAACAAGCAGCCGGTAAGAATGCTGCAAATAATTCAGTAATTGGCGATATGCAACAGTTTATTGAGCATACCGATGTTGCGGAAATATGCACCATACCCGCTCACTTGATGCCCGTGCCGGACGGTGACGATATCGTCATCGACAACAATAATATTAGTTTGGAGTTCGATGCCGATCTCTTTGAGGACTTTGACGAAGAGGATGAGGAAGACGATGGGGAGGGTCCTGTAGGCGCAGAGGGCTTGGCCGATAGACAAAATGACGATGAAAACGACAATAATGACGCTGCAATCGACCAAAACATTGTGCTCACCAGTGATGAAGAAGATGTTGACGACTTTGATGACGAGCAATCCAAGCATCTTCAGAAGCCATACTGTGTACACTGCAACAAGAAATTCACCAGCCAATACGTGTTTGAGAATCACATGTTCCTACACCGAGGTCTGGCACCATATCGCTGTGAGCTCTgtacaaatatatacaatcTGAAACGGGCTCTCGTACGTCACTATAAGGCTGTTCACAAACGTATGCCCACGCGGGATATGGTCCAAGCCAAGGGCGACAAAGCTGATATCTATCGCACTAATATTGAAAAGATTACCATTGATTCTGGCAAGCCTCCTGTCTTAATGTGTGCCAAATGCCCCTTTGAAAATGAGCAAGAGACGGAGATGTATAAGCACTTGAGTGCTCATCATGGCATTAATGAGGTCTTCAATGACGATGCAACTCGTCCTGCAGCCGATGCCTTTATTATACGCAAACTTCCGTTTGAGTGCCCTCGATGCATACGATCGTTTGCAGCGAAAAATTCCTTGACAAGACATTTGCAACGCAGTCATTTGGTGGACACAATAATTGAGGTTCCAGCAGTCAACAGTCAGCTCAACAGTTCAATCACCAGCTCAGCTAGTACGAAAACCACAagcacaccaacaacaacactttcATCAGATTCGGCGCTTCTGATGGATGTGAATGCTGCTTTGTCGGCGAACAGCGCAGACAATCCCAAAATGTTAGAAATGGCGGTGGATCCGGTGCTGGAACAAACGTCCAAATTTTTAATCGTTAAAGAAGAGGCCGATAGTCTATCTGAAACGGTCAGTCAGTCCACATCGACAGCACCAGCATCAACTACTACTAAATTGTTTCCCACACCAACTGAAACCTTTGAATTTGACTATGATATTGTGAGCAGCACTGCTTCGACCTCTTCCACCGACGCAGATGTCATTACCGCTTCCACAGTTCTTTCCACCGAAGATAAATTGTTAGTAAATACCATGGCTGATTTGCCTCCTATTTGCTTACCTCGAACTCCCATTTATATATGCATAAAATGCAATCACACTTTTGACGACCTTACCAAACTAAACGAGCACAAAGCAGAAGCGCACCAAAATACTGGCAGCTCTGATCGCagtaattttgaattcaagTGCGCTATTTGTAGCTGCTCATATCGCACACGAACTCTTCTCAATCATCATTTGCGGCGTCATATTAATCGGAGATATCAGTGCGAGCTTTGTCCCAAGACATTTGTGCAGCGCACAGAACTGGACATACACCTGAATACTCATACTAACGAAGTGTCCTACAAGTGTGAACTTGACAATtgcaaaaaagtatttaactATAAGCATCACCTCAAACGTCATCAGGACTCAGCTCATCTGAAGACGAAGTATCCCTGCACCTGGCCAGACTGTGGAAAACAGTTGGGTTCCAGTTCTCACTTGAAGATTCACTTGAATTGCCACGCTCGAACTAATCCGTACAAATGCCCAAAGTGCCCAAAAACATATACTCGACGCAAGGTTTTACAACAACATGCGCTACGCGACCATGAAATAGAAATGACCGAAGATGATTTATGCACGGTTTACAAGACAAACGCAGGTCATGCTAGTCCTGCCGACTTAACAGTTTTAACAGCCAGTGGGGAGTTTGTGCGTCGTTCAGTTGTTGAGACGCCCTCTGAGTTGGACGTGGccgttgtaaatattttgaattag
Protein Sequence: MPNRAMKIEEPVDFKLACRCCLKSDVEFFKLDSYTVARNIENYDINDGGTTDRISLLRCLLFCIRTENMPELPQYICVACSKSLQITYHFLQNAMRAHEILCHKLCPEKVKTQRNAQINGQYRLHQSEPKRTELLNNAKVERTPQDKSQKNERHKCKVCGEVIFDRAELKQHIFMHMNELGYVCRLCSFPTLQKCDIIKHYRTKHGLTQREAEDQLKRGNDNSIATSTNNTTGTTSSTNLTKTSEPVVKVCTLEDMELLIPTVLRPEDYEQPKIEVGTDEMQDNEDQSNQYTELKGNVIDTVDFQEISDYNINNSNDLTIGTEFLVMPDGSLQQMDTSGFLIEYINETGEEVQKQISDIDVVSKEPAEAANEIATPMDVDMSSDLIIEEVMSPIKAKPSRSPLKYKCRLCPKSFATEARLKSHQLTHSNLPKFYCEQCAFYTLRVPDLIQHYKVEHKLTPLDRKRSLLPLAQNKLFSCDMCLYETRSVGQLRSHYKLKHFIQPTEIQLRPSWCDDKDEQASTSSNCQLRTTIQTQPSDFPLGITYPRNIVKDIKQEEQPLPVQMGPNETITTNELHAEATSSMSDCTQESQQAAGKNAANNSVIGDMQQFIEHTDVAEICTIPAHLMPVPDGDDIVIDNNNISLEFDADLFEDFDEEDEEDDGEGPVGAEGLADRQNDDENDNNDAAIDQNIVLTSDEEDVDDFDDEQSKHLQKPYCVHCNKKFTSQYVFENHMFLHRGLAPYRCELCTNIYNLKRALVRHYKAVHKRMPTRDMVQAKGDKADIYRTNIEKITIDSGKPPVLMCAKCPFENEQETEMYKHLSAHHGINEVFNDDATRPAADAFIIRKLPFECPRCIRSFAAKNSLTRHLQRSHLVDTIIEVPAVNSQLNSSITSSASTKTTSTPTTTLSSDSALLMDVNAALSANSADNPKMLEMAVDPVLEQTSKFLIVKEEADSLSETVSQSTSTAPASTTTKLFPTPTETFEFDYDIVSSTASTSSTDADVITASTVLSTEDKLLVNTMADLPPICLPRTPIYICIKCNHTFDDLTKLNEHKAEAHQNTGSSDRSNFEFKCAICSCSYRTRTLLNHHLRRHINRRYQCELCPKTFVQRTELDIHLNTHTNEVSYKCELDNCKKVFNYKHHLKRHQDSAHLKTKYPCTWPDCGKQLGSSSHLKIHLNCHARTNPYKCPKCPKTYTRRKVLQQHALRDHEIEMTEDDLCTVYKTNAGHASPADLTVLTASGEFVRRSVVETPSELDVAVVNILN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -