Basic Information

Insect: Scaptodrosophila latifasciaeformis
Gene Symbol: zfh1_4
Assembly: GCA_037075145.1
Location: JBAMCM010000217.1:14976079-14977862[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 4.7e-06 0.0004 20.9 3.2 1 23 275 298 275 298 0.97

2 10 0.0071 0.6 10.9 0.4 1 23 305 328 305 328 0.96

3 10 0.0064 0.54 11.0 4.8 1 23 340 363 340 363 0.94

4 10 0.00043 0.036 14.7 4.5 1 23 368 391 368 391 0.96

5 10 0.0014 0.12 13.1 0.7 1 23 397 419 397 419 0.96

6 10 1.7e-07 1.5e-05 25.4 1.2 1 23 425 448 425 448 0.97

7 10 2.6 2.2e+02 2.8 3.2 1 23 453 475 453 475 0.97

8 10 0.014 1.2 10.0 9.2 1 19 481 499 481 499 0.99

9 10 0.0013 0.11 13.2 2.0 1 23 510 532 510 532 0.99

10 10 3.1e-08 2.6e-06 27.8 0.9 2 23 539 560 538 560 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	4.7e-06	0.0004	20.9	3.2	1	23	275	298	275	298	0.97
2	10	0.0071	0.6	10.9	0.4	1	23	305	328	305	328	0.96
3	10	0.0064	0.54	11.0	4.8	1	23	340	363	340	363	0.94
4	10	0.00043	0.036	14.7	4.5	1	23	368	391	368	391	0.96
5	10	0.0014	0.12	13.1	0.7	1	23	397	419	397	419	0.96
6	10	1.7e-07	1.5e-05	25.4	1.2	1	23	425	448	425	448	0.97
7	10	2.6	2.2e+02	2.8	3.2	1	23	453	475	453	475	0.97
8	10	0.014	1.2	10.0	9.2	1	19	481	499	481	499	0.99
9	10	0.0013	0.11	13.2	2.0	1	23	510	532	510	532	0.99
10	10	3.1e-08	2.6e-06	27.8	0.9	2	23	539	560	538	560	0.97

Sequence Information

Coding Sequence: ATGCTGCCCATAACGAAAGCCacagtaaacaatttttgccacTCATGTTTACAGCTTTTGCCTGACGATGATATTTCACGGACCAAAGCAGAAACGCGACATGATTTACGAGATGACAGTCATCTCCTTCAATTTCTCTGTGGCTTAACAGGAGGGACAGATTTGGGACCAGTTCGGTTTCTGTGTCACTACTGCTATTCGAAAGTCAATATGTTCTATAAATTTGGAGAAACTGCAGCCTGCACGTTCATAGCCTTAAGGGAGTTGCTCCAAGAAAGCGAAGCAAGGCTAAAGGAAATCGGTggattggaaaaatataaaagaatctGTTTCACCTGCTTTCGTAATATGCCCAATCTTAGCTCCAGTCAGGGGGTagttgattttcaaaattctagcGAAGATATGAAGCAATTGCTGCAAGATATAACCGGCTTTAACTTTGAAGAAAGCTTATCCTTGCCAACGcatatttgcaaattgtgctttaaaaaattgaatatttttgtaatatttcgTCGAATGAGTTCAGAAAGTCGTAACTACATTCAGTCAATTTCTTGTGATTCCACAGTATGTAAGACAGAACAAAATTCCGAAGACATATTAATCTCCACCATGGGTATTAAGATTGAAAATGTAGAGacTCTCTGCGAAGAAGCAAATTTAGTTCAGGGAGCAGAAGCCGAATTTGACCAAACAAGTGAAACTGAAATCGATTATGGAACTCAAAGCTTAAGTGGCAAAAGTGAAGATCCCTTCGAAAGTGACGAAGACGAAAAATTGCAGATCAATGAAAAATACCATATCAGTCCAAACATTTACATATGTGAGAAATGTAATCGAAAATTCCGCAAACGGTCTACCTATGAAAAGCACATCCGCAAAGTGCATGAAAATTTGGCAAAATCATATCCTTGTGAGAAATGTCCAATAGAGTTGGGTTCCAAAAGGCAGCTGACTCAACATTTTAATAGGAATCATTTACCTGCAGTAATCTCCTTAGAAGATGGAATGTTTCATTGCTCCATTTGCCAAAAAGCTTGTGCAACGCAATCTCGTCTTCGAGTTCATGAAAATCATGTCCATGGAGAGGCAAAATACGAGTGTGTGTACTGTCAAAAGAAGTTCAAGATCAAACACCATCTGACCGATCACGTCAAATTAGTCCATCAACAGCTCCGTCCATTCCAGTGTAAATTCTGTGAGCGCTCATTTGGAGCTTCAAAGACTCTGAGAGTGCACGAAATGGGTCACACAGGAGAGCGCCCCTTTCAATGtgatatttgccaaaaaaggTTTCGACAGAAAGCCGATTTAACCAAACATATAGAATCTACACACTTAGACTTTGCCTTTCGTTGCCGTATTTGTTCCTGCTGCAAGGCTAGCCAAGAAGCACTGGACGAGCACCTTTTACGTCACAACAACACAGAGGGATACCAGTGCACTAAATGTGGCCGCAAGTTCACAAAGTATTGTCATCTGAAGCATCATGATGATGCAGTTCATCTGAAATTGAGGCCATACAAATGCAGCTTCTGTGAGAAGACATTTGCAGCAAGAAAAACACAGCAAATTCATGAAAGAACACATACGGGAGAGCGTCCCCTAAACTGTTCCATTTGTGATAAGAGTTTTCGTAGTCGGGCCAATCTTGTTAGACACCTTCGTACGCATACGGGGTCAACAACCGTAAGCAAGGCAACTAAAGCCTCAAcgtaa
Protein Sequence: MLPITKATVNNFCHSCLQLLPDDDISRTKAETRHDLRDDSHLLQFLCGLTGGTDLGPVRFLCHYCYSKVNMFYKFGETAACTFIALRELLQESEARLKEIGGLEKYKRICFTCFRNMPNLSSSQGVVDFQNSSEDMKQLLQDITGFNFEESLSLPTHICKLCFKKLNIFVIFRRMSSESRNYIQSISCDSTVCKTEQNSEDILISTMGIKIENVETLCEEANLVQGAEAEFDQTSETEIDYGTQSLSGKSEDPFESDEDEKLQINEKYHISPNIYICEKCNRKFRKRSTYEKHIRKVHENLAKSYPCEKCPIELGSKRQLTQHFNRNHLPAVISLEDGMFHCSICQKACATQSRLRVHENHVHGEAKYECVYCQKKFKIKHHLTDHVKLVHQQLRPFQCKFCERSFGASKTLRVHEMGHTGERPFQCDICQKRFRQKADLTKHIESTHLDFAFRCRICSCCKASQEALDEHLLRHNNTEGYQCTKCGRKFTKYCHLKHHDDAVHLKLRPYKCSFCEKTFAARKTQQIHERTHTGERPLNCSICDKSFRSRANLVRHLRTHTGSTTVSKATKAST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -