Slat000732.1
Basic Information
- Gene Symbol
- hang_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000073.1:3188944-3207300[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.36 30 5.5 1.0 3 23 665 686 664 686 0.93 2 18 0.8 67 4.4 3.1 3 22 791 810 789 810 0.89 3 18 0.00062 0.052 14.2 3.3 1 23 898 921 898 921 0.91 4 18 0.17 14 6.5 0.1 2 21 933 952 932 953 0.94 5 18 0.00089 0.075 13.7 0.2 2 23 1079 1101 1078 1101 0.95 6 18 0.0026 0.22 12.2 0.2 1 23 1109 1132 1109 1132 0.96 7 18 2.1e-05 0.0017 18.9 0.1 2 23 1220 1241 1219 1241 0.97 8 18 0.00037 0.031 14.9 2.9 2 23 1329 1351 1328 1351 0.97 9 18 0.029 2.4 9.0 0.2 2 23 1360 1382 1359 1382 0.95 10 18 0.00056 0.047 14.4 0.2 1 23 1395 1418 1395 1418 0.97 11 18 0.00016 0.013 16.1 1.1 1 23 1476 1498 1476 1498 0.99 12 18 0.0025 0.21 12.3 0.9 1 23 1506 1529 1506 1529 0.96 13 18 1.1 96 4.0 0.2 2 19 1537 1554 1537 1555 0.92 14 18 0.00032 0.027 15.1 0.8 3 23 1639 1659 1638 1659 0.97 15 18 0.014 1.2 10.0 0.1 1 23 1694 1716 1694 1716 0.97 16 18 0.00076 0.064 13.9 0.6 2 23 1793 1815 1792 1815 0.93 17 18 1.5 1.3e+02 3.6 0.2 2 19 1835 1852 1834 1854 0.92 18 18 0.026 2.2 9.1 0.3 3 23 1870 1890 1870 1890 0.98
Sequence Information
- Coding Sequence
- ATGTGTGACGTTGCTGCctcgacagcagcagcagcagccacaacaacagcagcaaccacaGGAGGATGTGGCAGCACCACCACTACCAataccaccactaccaccaacATCACAACCTCAGCAATATCAACTGCAtcctcagcagcagcagtggcaacaacaataacagcagcaataacaacaacaaccacaagtGAGCAATTCTCAAAGCGACAAAATTGCTGTCGCCTCTGCATTGCCCCGGCCACCGAATGCATTTCGATCATCAATAGTTATGCGGCCGATAAGGAGCCCTTGTCCACCAAAATACTAAACTGCGTAAATATCAAGATCACACCACAGGATCGGCTCTCTTTGCATATTTGCCATGCTTGCATTAGTTATTTGAATTCTTGGCAGAGCTTTAAAAATCGCTGCCTCAGCTCACAGTCCAAACAACGCCATTGGTTGGATACGAATTCGAATAAATCGAAATTAcattatttcgatttgaataGTGCAGAAAATGGTGCAGCAAACGAGTCGTCAcaacaccaccagcagcagaagcaggaagaagaagaagctgctgcagcagcagcagcagcggcagcggcggagAAGGTGTCGGCCAACATTTTGGATGGGATCCCGTCGttgaaaaaacgaaaatcttTAACAGTTTATGTGAGtcccaaacaacaacaactactccaacaacaacaacaacagctatcAACAGCAGTAGccattcaacaacaacaacaacagcagcagcaggcggttcatcaacagcagcaacaacaacagcagcagcgaggATACACGGCGGTGGGTGTGTTGGCAgctcaacagcaacaacaacagcagcaacagcaacaacaacaaacactgcAGACTTTGTTGTTGCAGGTGCCCATGTTGGcggcaacggcagcaacagccaccacaacagcaacaacaacaacgatgaaTACCACAGGCACCACCAACACCCAGGGCAGTGGAAGTGCAATCAACTCGAGTATTACTGTGGCTCAGCCAcgcaaatataaatatcaacaacagcaacaacaacaaatacgcAGTGGcaagcatcatcatcatcaccatcatcatcaccagcaacagcaacagcagcagcactttcaacaacaacaacaacaacaacaacaacaacagctattAACACAGGTGAACAAAACTGTGAAGCCACGTGGACCGCGTCGTCCATGTCAGCCCAGGCAGCCAAAATTGCATCAGCCAGTACACCAGACGGTGACCCAGGCGCGTCCAGTTGCTGGAGCACATACGGGCAGATTAAAGGGCAAAATGGCCACTAGCTTTCTGCCACTGGAAATAGGACCAGCCGTAGGACCGGTGACAGCCGTCTTAACAGAAAGCCTTATGCCCATCTTGACAACCACCACAGCAGCCACCGCCATCACGGCAACAACCAccacagcaacagccacagcagTGGCCCCAACAACTTGCCCTATTAACAGCCTGACCATGTCGTTGCCTTTGTTGCCTATCGATTTTAGtcaacaacgccaacaacaaccgccaccaccaacaacaacaacaattcaattgccacaacaacaaagtctaCAGCCAACAATGTTGTCTGTTAGTGTGCCCAACACCACCGCCCTAGTCGATGTGATCAGCACTCccccaaacaacaacaccatcaccactactacaacaacaacaacagccaccaccaccactaccaccaccctGACACCACTTTTAATGCCGCCTCTGCCTGCCATACCCATTAAGGATGAGCCCATCGATACGGATGAGGATTATCAAATGAAATCCATAGATGAATCCGATGATATGGTCGATCCCACCATGTTCCTAGAGCGTTCCGAGCACGAAGGCGATGTGCCATTAAtgaCCTCCGATTTTGATTATACCGCCCAggcggcagctgctgctctGCCAGCTGCAGCTGTGGCCAATGTGGCCGCTGCCGGTGACTCCAAAGTGGCCTCCTGTCGCGCCTGTAGTCTACAATTTTCCACACGCGCCAATGCCCGTCGCCATGAGCGTAATCTGCATCCGAATCTCTTTCAGCTGTCCACAGATTCGCGCAACAATACACCGGTGACCATGCCCACAGTAGCCCTGGCTGCCGCTCTGGAAATTCAACGTGCCGCCAATGCAGCCACCGCCGAGGCTAGCCGTGCCGCTGCCAGCGGTAATATCTCCAATCAAAAATACCGCCAGGTGGTCATGAATGCCTTCATCAAATGCGAGGGTGGCGGCTATGACTATGACAATCCCGAGCAATATCAGCACTTGCTCACACCCGAGAAATTCGATTTCATACAACAGAATCAGGAGTTCCTCGAACAGTACCAGATCATGACCTGTCGTTGCTGTAATAAATTCTTTGATACCTACAAGAATTTCATGGCACACGTGAGAAAAAAGTATCCACAATTGCCGAGGAATTTCTGCTTCAACTGCCTCAAGATGAACGATTCGAAGGCTTTGTTCATTTCGCATCTAAAGAAGAGGAACTGTATCAATCTGTTCAAGGTCTTGACTGGCATACGGGCCAAGCAGCCGCATTTTATGCCCGGGGCCGAGGGTGTCGCCGTCGGTGTTAGCGGAAATTCTAGCTTCAGTGGTGCGGACAATTCCATTGGCGAGAAGCCGAGAGCCAAGGATCTGCTGGTCAATAAGCTGTACGAGTGCAAGCTATGCCCGAAGGGTTTCCGGACCAAGCATGAATTCCGCACCCATGTCTATGAGAAGCATGCTGATGTCCAGCGCAAGGATAACAATTCGGTGCAATGCAGCTTCTGTGGCCTCGACTTTGAGGATCCCGCTCTGAGGAGGCGGCACTACAACAATATGGATTGCATTGTGCAATTGCGTTGCATGACCTGCGATGTGAAGGTGGATACACATCAGCGTTTCCTCGATCATGTCTATCAGGATCATTTGGGTGGCATGAGCAGTGACAATGCCTCGACGGCGAGTGGTCTGGGCCGTAGCAATAGCATGGAACATTCCCCCGGCAAGCGTAGTCTATTCGGTGCGCTGGGCATTGGTGGGGCCACCACCTCCTCGAATGATGAGTCACGCAGCAGTAGTGCTGCTCCCTCAACTCTAATGACCTCGACACCGAAGCCAGGCAATGCTGCCAATTCTGGTGGCGGCAGTGGCGCTGGCAGCGGCGGTGGTTCCTCAGCTCCCAAGTCGCAATATTTTTCGCGCATGCCTCAGGTGTGCCCGATCTGTGGCCAGCAGTACAACAACTATAACAATGTGCTGCGGCATATGGAATCCAAGCATCCCAATAAGCTACCCGAGACCTATAAATGTGTACGCTGCGGCCTGGGCTATCCCAGGATATCGTATCTGCGCGAGCACATGATCAATATGCATGGCGTCGATAAGAATCGTCATTCTGGCGGATTCGAGTATATTGTCAATGCGGATGCTGTCAAATTGGCCGATGGCAGTACACCGAACGTCTATACGGGACGTTATGATTATGTCATGAAGGATCTGATGTCGATAACAAATGGTGGGACACTCGATTATGACGAGGAGGAGCCGGCTGGTGGTGTGGCCAAGAAGATGCGTCTGGATGAGAGCGGCTCGTCAGCGCCTACGGTGAATGTCAGCGTTGGTAATCAGCAAAAGGAGTGCCCCATCTGCAATGCCGTCTTCAGCAATAACATTGGACTCTCGAATCATATGCGCTCCCATTACACAGCCTCGAGCACCACAAATGCTGCCCTGGCTGCTGCCAATCGCATGACACCCAAGTCTCTGACCATCACAGCAGCGCCGGCTGTGAGCTCGTCCAATGCCGGGGGCAGTTCGTCCACAGCCACCTCATCCGGCGGAGGTAAAAGCAATTTGGCCAGCACAAGTCTACCACCGGCCATGCTGAATCAGACACCCCAGGAACAGGCCGTCTTTCGACGCAGCTTGGACCAGGCTGCCGATCGTCGTTTCCGTCGTATGCGCTGTCGCATCTGCCAGCGACGTTTCAGCTCAAAGAAATCCTATCGCTATCACATGCTCACCGACCATCAGGTCCAGAATGTCCAGTTCATTAAGTGCAAGCTGTGCAATGCCGAGTTCGCCTATGAGAAGGGCCTAAAAGTGCATCTGTTCAAGGTGCATGGCACTGTGATTAAGGACGAAATGATTATCAAGCAATTCGAGTGTGAAATCTGTTCGATTGTCTACAGTTCGGAAATGGAACTGCAGCAGCATAAGCGTTCCGTGCACAAGCTTAGCGAGGCTGAACTATTGGCTTCTTCCCAACAGCAGCATCAATTTTCGTCTGGCTCTTTGGATGATGACACTTTGATCAAGGGTGACGGTGATCTATCAACTCTTTCCACATCCGCGGCTGCTATGGGATCTGCCACCGCTGTGGCTGCTGTGCCACTGTATTGGTATCAATGCAAATATTGTCCCTCCAATttcaatacaaacaaaaagctgGCCATACACATCAATTCCCATGACGAGTTCGATTCAAATGATTATTCCTGCAAGGATTGCGGCAATGTCTACAGCGGACGCAAGAGCCTTTGGgtGCATCGCTATAAAAAGCATCCCCAAGTGCCGGATCCAGCCGAGTGCGTCTTATGCCGCAAGGTCTTCTTCGATCGCCAAATGCTGGACAATCATACACCGACTTGTAATCGCAAGCCGATCACTGCCACAGGAGCCCATCAACAGGATGGCGGTGCTGCCTCAAGCACAGCTGCCAGTGGCTTGGTCCCCAGTCGTGGCCTCTTCAAGCACAAGACCGGCGATGATGAAGACGATGAAGATGAAATGATGCTCATGGATGATGACAGCAATCTGGGCCCAaacacaaccaccaccactaccaccaccagcaaGGCAACCATGAAAATACGCATACCCGAGGTGGCTTGCACAATTTGCGGGGCACGCTTCACTGATCAGGAAATGTTCACCAAGCATTTCCAGAAGCACGAACAGGAACTCTATACAGACAATCCCCTGGCCGCCATGTTCGATGATGGACCAGCCGATCCCAGTCAATTCTTTGTCGAGCGTCAGAACGAGAATGGCGAGTACGCATGTGATTTGTGTGCCAAAACCTTCCCGCAGGTCTTGGCACTCAAGGTCCATCGCAAATGGCATTTCAGAGGTGATAGCAAGCAGAACCCCAACGAAGGAGAAGCGATGGCTTCggggaacaacaacaacaacaattcggTGAATTCCACTGCCATGCTACGGGAACTGCATGCCGTGGGCCTGATGCCcaatcaacagcagcaacagcagcagcaacacctacaacaacaacagcaacaacaacagagcagTGCGAGCCACAACAAATCACTGAAACGAAAACGTGAATTAAAATGTGAATACTGCGCCTCCACCttcatcagcaacaacaacttgcgTCGTCACATGTATGAACTGCATAAGCATGAAGTTAGCAATCTACCCGAACCGCCAGTCATTGAGGTTGATGAGTTCTTAAGCTGTCGTCGCTGTAATTTGAAATTCGAGACAAAGGAATCCTGGATAGAGCATAAGGTGGCCGATGCCAAAATCACTCGACCCTTCTGCCCGTTCCAATGGGGCTGTGATTTGTGTGGCGAGTATTTGTCGCGCAAAGAGAAGCTCATCAATCATGTCAACAATCATCTCAAGGAGGAAGTGATAGTGCCGGTGGCCAGCAAGCAAATTGTGGCTGGCAAGGTGGTCAATAAGACGATCGTCAATCGGAATGCAGCCACcgcaacgacgacgacggcggcgacaacaacaacaacaaccacagcggCAACAGCGTCGGGGGCCAAGCCAAAAACGCCGAGCGCCAAATTGTCCGCACAAAAGTTGTCTGGAGCCGCTGCAGTCTCATCAGCGGGACTGGGCGGCAGTGGTACAAGCTCCTCAGGAGGCTCTGCTGCGGCGGCGACGGCGGCTAAGCGTGTGAATGTGCCGGCGCCGGCTGTTTCGGCTGCTCCCACCGACGAGGATGACGATGAAGAAGACGATGATGAGGACGAGGAGAGCGAAGTAGAGgctgcagcagcggcggctgcTGCCAATACTGGTCATCGGGTTCAAATGATTGACGACGATGAGGATAGCTCGggtgatgacgacgacgaagaggaggaggacgaagatgacgacgatgatgatgaagaggaggaagacgatgacgacgatgatgatgacgaggatgatgatgacgatgatgatgatgaggaggaGGTGGTGGGTCAGGTGGATCAAAGCCAGCCAGAGAATCCACGTGTCCCACTCTTGCACATACGTAAGactaacaacaataacaataacaatagcagcaacaacaatatgcCTGTGGTGGCACCGGATAGCGACGACGATCTGGTGGAGCACATTGAAGACGAAGACGAGGAGGCCGAAGAGGACGAAGACGAAGGTGTCCAGGTGGCCGGCATTGAAGAAGACGATGATGAAGACGAggacgatgacgacgatgatgaagaagacgaagacgatgacgatgatgatgacgaggAGGATGAGGAAGAAGACGAAGCCGCCTCTTCCATGGCCTCCAAAAGGCAAATACCCAATCGTGTGACCTTCGATGGCATTGAATTTATCTGCTCAAAGCCGAAAGTGAATggaaagcagcagcagcagcagcagcaacagcagcagcagcggctcGAAGAAGATATGGAGGAGGATGAGGAGGTCGAAGGTCTGGATGAGGAGGAGCCCGAAGAGGAGGATGAGGATATGATTATCGAGGAGGTGGTCGACGATGATGACCATCATGTCATCGATGAGCAAGATTTAatggaggaagaagaagcacacaATTTGGTGGGTGATAATGTGATGGTGATTGAAGCCgaaaatgatgatgaagatgatggaGGAGATGGAGGAGGCGAAGGAGCTGTGGAAGTGGCAACAACAGCTGCCGCCAATTCAGCTCGGAAAAAGGCGAACATGAATAGTAGCTCAGCGCAATCGACAAAATCTTCAAcaacttcatcatcatcggcGGCTTCCTCTGAAAGtgaaacgacaacaacaacaaccactcagtcacagcagcaacaacaacaacaattacaggGAGTTGCTGCAGGCTCACATCAAAAGCCATTTATACAATGGACCGACAGCAGCGGGGGCCACAAGCAAAAGCACcaagaatacaacaacaacaacaacaaccgccaCAGCCGTGAAGACaacaacgatgacgacgacgacaacggcGATGGCGACGGCGAAGGCGACGACGAATCAGAAGAGTCTTCACCACACTCCCAGCGCCGCCAGCAAATCTCAAACTTTGAATag
- Protein Sequence
- MCDVAASTAAAAATTTAATTGGCGSTTTTNTTTTTNITTSAISTASSAAAVATTITAAITTTTTSEQFSKRQNCCRLCIAPATECISIINSYAADKEPLSTKILNCVNIKITPQDRLSLHICHACISYLNSWQSFKNRCLSSQSKQRHWLDTNSNKSKLHYFDLNSAENGAANESSQHHQQQKQEEEEAAAAAAAAAAAEKVSANILDGIPSLKKRKSLTVYVSPKQQQLLQQQQQQLSTAVAIQQQQQQQQQAVHQQQQQQQQQRGYTAVGVLAAQQQQQQQQQQQQQTLQTLLLQVPMLAATAATATTTATTTTMNTTGTTNTQGSGSAINSSITVAQPRKYKYQQQQQQQIRSGKHHHHHHHHHQQQQQQQHFQQQQQQQQQQQLLTQVNKTVKPRGPRRPCQPRQPKLHQPVHQTVTQARPVAGAHTGRLKGKMATSFLPLEIGPAVGPVTAVLTESLMPILTTTTAATAITATTTTATATAVAPTTCPINSLTMSLPLLPIDFSQQRQQQPPPPTTTTIQLPQQQSLQPTMLSVSVPNTTALVDVISTPPNNNTITTTTTTTTATTTTTTTLTPLLMPPLPAIPIKDEPIDTDEDYQMKSIDESDDMVDPTMFLERSEHEGDVPLMTSDFDYTAQAAAAALPAAAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSRNNTPVTMPTVALAAALEIQRAANAATAEASRAAASGNISNQKYRQVVMNAFIKCEGGGYDYDNPEQYQHLLTPEKFDFIQQNQEFLEQYQIMTCRCCNKFFDTYKNFMAHVRKKYPQLPRNFCFNCLKMNDSKALFISHLKKRNCINLFKVLTGIRAKQPHFMPGAEGVAVGVSGNSSFSGADNSIGEKPRAKDLLVNKLYECKLCPKGFRTKHEFRTHVYEKHADVQRKDNNSVQCSFCGLDFEDPALRRRHYNNMDCIVQLRCMTCDVKVDTHQRFLDHVYQDHLGGMSSDNASTASGLGRSNSMEHSPGKRSLFGALGIGGATTSSNDESRSSSAAPSTLMTSTPKPGNAANSGGGSGAGSGGGSSAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINMHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDYDEEEPAGGVAKKMRLDESGSSAPTVNVSVGNQQKECPICNAVFSNNIGLSNHMRSHYTASSTTNAALAAANRMTPKSLTITAAPAVSSSNAGGSSSTATSSGGGKSNLASTSLPPAMLNQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGTVIKDEMIIKQFECEICSIVYSSEMELQQHKRSVHKLSEAELLASSQQQHQFSSGSLDDDTLIKGDGDLSTLSTSAAAMGSATAVAAVPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECVLCRKVFFDRQMLDNHTPTCNRKPITATGAHQQDGGAASSTAASGLVPSRGLFKHKTGDDEDDEDEMMLMDDDSNLGPNTTTTTTTTSKATMKIRIPEVACTICGARFTDQEMFTKHFQKHEQELYTDNPLAAMFDDGPADPSQFFVERQNENGEYACDLCAKTFPQVLALKVHRKWHFRGDSKQNPNEGEAMASGNNNNNNSVNSTAMLRELHAVGLMPNQQQQQQQQHLQQQQQQQQSSASHNKSLKRKRELKCEYCASTFISNNNLRRHMYELHKHEVSNLPEPPVIEVDEFLSCRRCNLKFETKESWIEHKVADAKITRPFCPFQWGCDLCGEYLSRKEKLINHVNNHLKEEVIVPVASKQIVAGKVVNKTIVNRNAATATTTTAATTTTTTTAATASGAKPKTPSAKLSAQKLSGAAAVSSAGLGGSGTSSSGGSAAAATAAKRVNVPAPAVSAAPTDEDDDEEDDDEDEESEVEAAAAAAAANTGHRVQMIDDDEDSSGDDDDEEEEDEDDDDDDEEEEDDDDDDDDEDDDDDDDDEEEVVGQVDQSQPENPRVPLLHIRKTNNNNNNNSSNNNMPVVAPDSDDDLVEHIEDEDEEAEEDEDEGVQVAGIEEDDDEDEDDDDDDEEDEDDDDDDDEEDEEEDEAASSMASKRQIPNRVTFDGIEFICSKPKVNGKQQQQQQQQQQQRLEEDMEEDEEVEGLDEEEPEEEDEDMIIEEVVDDDDHHVIDEQDLMEEEEAHNLVGDNVMVIEAENDDEDDGGDGGGEGAVEVATTAAANSARKKANMNSSSAQSTKSSTTSSSSAASSESETTTTTTTQSQQQQQQQLQGVAAGSHQKPFIQWTDSSGGHKQKHQEYNNNNNNRHSREDNNDDDDDNGDGDGEGDDESEESSPHSQRRQQISNFE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -