Slat008592.1
Basic Information
- Gene Symbol
- CSRNP3_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000217.1:4343311-4346137[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0011 12 6.0 4.9 34 110 22 97 10 114 0.56 2 2 2.4e-94 2.5e-90 302.4 9.7 2 218 370 572 369 572 0.91
Sequence Information
- Coding Sequence
- ATGGAGAACATGTTTAgtccaatcaaaaaaatatttacttatataCAAAAGAATGCCAGCAGTGGGACAATGTTTGGCCATAGCATAGCGAACAATGTGGTGCAAACGATGCACaaggaggaggtggaggaggaCGTCCGAAATACATCAAGGAATGAGAACGAAGAGCAAACAGaacaatcacaaaaacaactgGAAACAGGAGAGGCCAGCGTGAGGCAGGAAAACAATCGAATTGCGGAGGATGTCGATGAGGcggaagaggaggaagaagtgGACTTTGAGGATGACATAGAAAAGCAGATAAAGCCATCAATAATTGATGCCACCAAGGTGAATGTGTGCgggagcaacaacaatacccAAGTGCTATCACCAAATCTCCAGCTGGATGATGAGCTGGCCGATTTTGCTCACGAACCGATCGAAATAAGCGTTCGGGTAGTGgacgaggaggaggaagatCTGGATGAGCAGTATCTGGAGCTGGAAAATTTCCCTAACAATGAGATCATAGTGCTCAATGATGCCGATCTCAATTCATCACTGGCCTCGGACAATGTTAGCGAGGATCCCCTGGCCATTGATGACTTTAAGATAAGAGATTCGGACAATGTCCTCGACTCGTCGTCGATGACGACCAATGAAGAGGCCGATACCAGTGCGGATCTGCATTGGCTCAAATTGGTCCCAGAAACGGAAGAGCCCACGCCCAGCGGCAGCAATTGCAATGACCAAGTGCGTCGTAGCCTACCTTTAAATGGGATGACGCCGCCCAAGCATCCAAAGACCAAAGAGGATGAGCTGCGCAGCGATGGTGGCTCCGACTCTGGACTGGGCAGCGAAACCTCCGCCTTGCAAATCACCCTCGGTGATGCCAGCCAACTGGCCACACCAAATgccacgcccacacacacacacaaaccccCGGATACCGGGTCAGAAAATGTGGATGGTAGAAAACCAGAAACAGTCTCCACCTCCACGCCAGCCCAGCCAGTTCAGCCAAAGATGCCTCTGCGTTCGAATCTCAAGCGCAGGCTTGAAGATTCCGTGGGCCTTGACCTGGGCCTGGTGGCCAGTGCTACTTCCACCCAACAGAAGCGAGCCAAGCGTTCCGTAAACTTTGAAAATGTCAAGGTCTACTATTTCCCCAGGCAGCAGGGCTTCAGCTGTGTACCCACAGCGGGTGGCTGCACCCTGGGCATGGGTGCCCGCCACATAGCCTTCAAGACGATGACTCTGGCCGAGCATGCGGCCGAACTGAGACGGGCACATCGTAATCAAAATCAGGATATACAGCCTCGGGGTTCCTCTAGCGATGATACCGAGGAGTCTGAGGAGGATTATCTCAGCGAGGGCAGCGGCTCCGATGGCGATGGTGATTCCAATGGCTTCCTCCAGCCGGTGGTGCCCAAGCAGCGCCGGGCTCTGCTCAAGGCAGCCGGTGTACGCAAGATCGATGCCAGCGAGAAAATCGACTGCCGGAATATACGCAACTCGCGGGAAGTCTGCGGCTGTTCTTGCCGAGAATTTTGCGATCCGGAGACCTGTGCCTGTAGCCAGGCCGGCATCAAATGCCAAGTGGATCGGGCCATGTTCCCCTGCGGCTGCACTCGAGAAGCCTGCGGCAATACTGTCGGCCGCGTGGAATTCAATCCCACCCGTGTGCGTACCCATTACATACACACGGTGATGCGTCTGGATCTGGAGCAGCGTCAGGGTCAAAATCCCAGCAGCTTGAATTATGGCGGCCCTGCCGTCTCCACCGCTGTGCCCTCGGTCTCCCACTGCTATTTCATGCCCACGCAATCCAACTACAGCTCCGGCTATGCCTCGCCAGCCTACACGCCCGACAGCAGTGTCAACTACTACCAGTCCCAGCAGCCTGCTTCCACCACCCAGACGGACTCCACCCAACAGCCACAGCCGGCGGGCTATCAGGATCTGCAGGCCACCCACTACACACCGCTGGACAGCCTGGACACGAGTCTGTTTACCAGTGGTAGCAATGCCACGCCCTCTTATGGAGAACTGGCCTACCACAGTCTCAGCTATAGCAGTGGCAATCAGATTTCGCCCTATTCGACCTATCATCAGCCACAGAGCAGTGGGGGTAATCCGGTTGGTTATAGTTCGTGTGCTGTGCCGTCGGTGCCGCCATTTGGGAATGCCACCACGACAGCATCCACCGGACAATATCATCAAGCGAATGTACTCGAAACCACCGCCTCATCCCTGACCTCGACCACAACGTTCCTGGCAACGGCGCCCACAGCGGCCACGGTCACTTGTGCCTTTAGCCAAAATCGCCCAACGGCTCCAGCTGATTTCATCAATCTAAACTCACCCATAGCCAGTTCCTCGCGTCTCTCCCAAATCAACGATCTGTTACAGCATAATCGAAATACCACGGCCGCCCTGGTGGCCGTATCCGAGTCACCAGGCTATCCACGCAATTCCACCAGCAGTACCACCGTCACCagctccagcaacaacaacaacaacaacactggcaCCACTTCGATAGACTCCATTGACACGCCACCCATTGAGGAGGGCTCCAGGCGTGGCAGTTGCCTAGATTTCGAAGAATTGCCCGTGGTGAATCCTACGCCCATTGTGGCTGTCCTACAGCCAGACCCGCCACCTCCACCGCCTAATACGAAATCGCTAAACACCTCCACCCTTTCCGCCCTGCAAATGTCGCCAGCAAATCCACAAGTCTCAGACACAAGCCAAATGGCCACAGCGACCACAACAGtctaa
- Protein Sequence
- MENMFSPIKKIFTYIQKNASSGTMFGHSIANNVVQTMHKEEVEEDVRNTSRNENEEQTEQSQKQLETGEASVRQENNRIAEDVDEAEEEEEVDFEDDIEKQIKPSIIDATKVNVCGSNNNTQVLSPNLQLDDELADFAHEPIEISVRVVDEEEEDLDEQYLELENFPNNEIIVLNDADLNSSLASDNVSEDPLAIDDFKIRDSDNVLDSSSMTTNEEADTSADLHWLKLVPETEEPTPSGSNCNDQVRRSLPLNGMTPPKHPKTKEDELRSDGGSDSGLGSETSALQITLGDASQLATPNATPTHTHKPPDTGSENVDGRKPETVSTSTPAQPVQPKMPLRSNLKRRLEDSVGLDLGLVASATSTQQKRAKRSVNFENVKVYYFPRQQGFSCVPTAGGCTLGMGARHIAFKTMTLAEHAAELRRAHRNQNQDIQPRGSSSDDTEESEEDYLSEGSGSDGDGDSNGFLQPVVPKQRRALLKAAGVRKIDASEKIDCRNIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQRQGQNPSSLNYGGPAVSTAVPSVSHCYFMPTQSNYSSGYASPAYTPDSSVNYYQSQQPASTTQTDSTQQPQPAGYQDLQATHYTPLDSLDTSLFTSGSNATPSYGELAYHSLSYSSGNQISPYSTYHQPQSSGGNPVGYSSCAVPSVPPFGNATTTASTGQYHQANVLETTASSLTSTTTFLATAPTAATVTCAFSQNRPTAPADFINLNSPIASSSRLSQINDLLQHNRNTTAALVAVSESPGYPRNSTSSTTVTSSSNNNNNNTGTTSIDSIDTPPIEEGSRRGSCLDFEELPVVNPTPIVAVLQPDPPPPPPNTKSLNTSTLSALQMSPANPQVSDTSQMATATTTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -