Slat014281.1
Basic Information
- Gene Symbol
- Camta1_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000443.1:1289456-1313297[+]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-49 1.2e-44 151.0 2.2 2 116 252 364 251 364 0.98 2 2 0.85 1.8e+04 -4.4 0.6 67 89 589 611 568 619 0.50
Sequence Information
- Coding Sequence
- ATGGCCGGCTATCGTGCGCTCCCGCTGGCTCCAGTTACGGCTAGCAGCATGACAGCCACGGTGGCTGCTCCCCCGCCACCCAGTGGACATGTGCCCACTATGTCCTATGCTCATCATCAGTCAATGACGGCCATGTCAAATAACGGTATTATCTATCAATCGGCGGTACACGCCTCCATTCACAGCCTAAACACAGTACAAAGCCAACATCGTTCATCAACCACGCATCATCACATTCTAGCAACAGCCACGGCTGCTacagtggcagcaacatcGGCTGCCCTTCCGCCGACGGCAGCAACACTTGCTGCTGCAGCCACGAatcttcaacaacaacaacaagtgccCCAGCACCGGGATATGTCTGGCTATGGcaaccaacagcaacaccatatgcagcagcagcaacaacaacagcagcagcagcagcagcaatcgtTGCAGGCCtcacagcagcaacaccagcagtcccagcagcaacaattaaTGCTGcaccagcaacaccagcagtTGCTGCCACATCCCCAACACCTGGTgcaccaccatcatcaccaccatcaccagcaGTTGTCACTGCATCAGAACCACTTGTATTTCAGTGGCACAAGTCTTGGTGGACCcaatcaccaccaccatcatcggCAGATCTTCAGTCATTTGCAGAGCGCTCTGATGCCTCTCAGTGTCAatgGCGAACCTATCAAACTACCCGACAATTTGGAGAGCTTGCCAAGAGCGGACAGTTTTCCATCACAGCGTCATCGCTGGAATACAAATGAGgaAATCGCAGCAATCCTTATCAGCTTTGACAAACACAGCGAATGGCAATCAAAAGAAGTCAAAACAAGACCAAAAAGTGGTTCCCTGCTGTTGTACTCACGCAAAAAGGTACGATACCGACGCGATGGGTACTGCTGGAAGAAGCGCAAAGACGGCAAGACAACTCGAGAGGATCACATGAAACTGAAAGTACAAGGCACTGAGTGCATCTATGGTTGTTATGTACATTCGGCCATATTGCCCACGTTTCATCGCAGATGTTATTGGCTTTTGCAGaATCCTGATATTGTTTTGGTACACTATCTGAATGTGCCATATCCGGATGATAATAAAATGGCCGTAATTGCACCGAGCATCACACTCTGGGGTGATAAAAAGGAGTGGACCAAAGAGGAGCTGGTCAGTCAGTTGAAACCGATGTTATCCACAGTAAATTCAGATGATGACTCCGATTCGGGCAATGATATTGAAATATCTACGGCTGAAACAGTTGAGTCAATTGTGTGCCAACTTATGGAGAAGCAGCGATTGTCACGTCAAGCAGCTCTAGTCAAGCAATTGGACTGTGGATGCGGAGATGCCAGCTGTGCCGATGGCAAAAGTTGCTCTCATCCAGTTATGAGACGTACTGGAATTGTCAAATCAGTCTCTGAAAAACGAATCACTATGAACGAAGGCTACAATCATAATGGGGCCAGTGGAACGCCGAATGTTGTGGTGGCCACTAAGCTTTATTCACGTTGGTCTGAACGTCATAGACAGCGGGAGGCAATGCATTTGGATAATCCACACAGCCAATATCACACTGCTACACAGCAATTGCCGCAAGAGTCGGCCATTAAGTTTCAGATCATTCCaccccagcagcagcaacaacaacagcagcagcaacacctaCAACAATCAAGTCATGGCGAAGGGAATTATCAGCAGCAATACCGTGGTAATCAAATGTTGGCCACAAGAAACAATTTGATgttgcaacagcagcagcaccaccaccaacagttgcagcaacagcagcaacatcacaCAAATTatcaccagcaacagcaacagctcaGCTTGCAGCGTTTCGTGGCCAGTCACAATCAAGCCAGTGGCAATAATAATAGCAGTAGCAATCCAGGACACTTAAATCATCGCCTTCAAATTGCCAATACAAcaattacagcaacaacaagagaagcggccgctgcagcagcagcaacaacaacgacatcAGCTTCAAATGTCATGGAAACAGAACTAATTGAAAATCAGAGCCACATAACCACAAATgcaaattccaataaaatcaaCCACAACACAAATAACTgtaacaacaatagcaacaacaacagtatcAGTAATGTCGGCAAGCAATTAGTATCAGCAACAGGAGGAGGAAGCGAAGAAGGAGCAGTGCAAACAACTCAAACAAACAACGAATTAAATGCCGTAAATAATAATGGAAATGGCAGCAGTTCCAATGCAAACTCCAATACCAACAATAACTTCCTATAcagtcagcaacaacaacaactaaatgCTTCCAATACCAGCACTCAACAGCATTATTACAAATTGCAACAGGCAGTGTTAGTTGGCTCGCATTCTGCTCTCACACCTGCCAGCCACAGTAGCCCTGCAGTCGAGGCTATGTGTATGTCCCCAGAACACCATAGCAcacgcagcaacaacaacaacacaaccaacagcaataaaaataccaccAGCAATAACAATCAACCCTTGCTCACAGCCACGTCTTCCACTAGCAATAGCACACCCCTTACATCATCATCGGTCACTTCATCCACCTCAAGTTCCTTACAGTCGATAATTGATGgcaatcaacagcaacaaatcgCAACGACagcaagagcagcagcagcagcaacagagGCAACGAATTCAACGGCAGCGACAGCAACGGTAACTTGTGATAATTTAATGAGCGCCAATGCTCTCACTGAGTTGACAGAGGCGAATGGAAATAAtagcagcaatagcaacaccaacggcaacaacaacaatcagtcCATAGATGGTCATAAAAACCACAATGGTTGTGCAAACTTCAGTGCTTCCAGTGATAACAGTAGCCAAATTAGCGGCAGTGATGAAAGCAGCTTTGGTGCCATGGAGCTTAATGTAAACGCCAACAATCAGAATAGTAATAGCAATGATGATGATCTGGAGGCAACCCAGGCAGTCCATAACAACGAGACGCTGGGTTTCTTTAACGAGACTTTAGATTTATCACACGAGGACATACAACGCACACTTATTGCTAATATGCCtttcaacaataacaacagcaatcaCAGCAACAATACCAATAGCAACGCTAACaatacaacaatttcaacCTCAGAAACCAGTAGCAAAGCAGACGAACAAAGGCATGGAAATGTCGTTGAATTGGGAAGAGTATCGGTTCGAACTAACGAAGACAACGAAGGCAATGATGAGGACACCGATGATGTCTTTGCCAATTTGGACGCTTTTGATATGCTGGTAGAATTTCCAGAATTGGATTTGGATGATAAACAAGCGCTGACCAATACAGCCATTGAGCAGGGCCAGGGCTTGCAGACAGGAGTCTCATATCTAAGTGAATCGTCTGCAACAACTTTGGTGCCTGCTACTCAATGTGATCGTAAATTGCTCAACATCTGCGACTTTAGTCCGGAGTGGTCATATATTGAGGGAGGTGTGAAAGTTCTTGTGGCCGGACCATGGACCAGCAACTCTACATATACGGTCCTATTTGATTCTCAGCCTGTGCCAACAGTCCTCGTTCAGGAGGGTGTACTTCGTTGTTATTGCCCAGCCCATGAAGTTGGGTTTGTTACTCTCCAAGTAACTTGTGACGGCTTCCTAGTCTCCAACTCCGTCATGTTTGAATACAAGATGTCATTGCTGGCCGATGCACCTTTTGATGCCAGCAGCTCCAACGATTGCCTTTATAAGTTTACCCTACTCAATCGCTTGTCTACCATAGACGACAAATTGCAGGTTAAATCCGAAAACGAATTGACATCGGATCATACGGAACTTTATCTGGAACCCAACTTTGAGGAGAAATTGGTTGCTTACTGTCACAAGCTGACAAAGAACTCGTGGGGTACCACAACCAATGCCACGTGGAGTGTCGGTTTGCGTGGAATGACACTGCTCCACTTGGCAGCTGCCATGGGCTATTCAAAGTTAGTATGCGCCATGTTAAATTGGCGCGCTGAGAATCCACATATCATACTGGAAACTGAATTGGATGCACTTAGTCGAGATGTTCACGGCTACACACCTCTGGCCTGGGCTTGTGTCCGAGGTCACTTGGAGTGCGCTCTAATACTTTACAAATGGAACCACAATGCTCTGAAGATCAAAACACAAGCTCAGCAGACGCCTCTCGACTTGGCCAATCTGAAGGGTCATAGACTAATTCTGGGACAAATTTATCGTCTCGAAAAAGAGCGCTGTCGAAAGAATCAAACACGAGGTCCCTTCGCCAGCCTCTCTATGAATATGGGACGAAATATCCATGGCACAGACACAGACGCGGAGGAGCACGGTTACAGCGCATATGAATTAGAACTGCAACGCAAACATGATGGTGTATTTTTGAGGCCTGTGGCACTACAAAGCAATCAAAGTCCTCCCAACAATAGTCGCTACTCGAAACGATCTTCCATAGATAGTGGCATTAACATGGATATACGGACCAAATCGGGCAAATCTCTAAGCAGATTACATGGcaACTTCGAAAGTCACGACAGCTTTTCTCTGGGTGTTGAATCACCCTTGGATACCTTATCAGCCACGAATTCTCTGCTCTCACCTTTGCGTAAAATGGATTTCGCTTTGTGCGAAGTATCCACGGGCGAATCCAGTCCCTTACACGAAAAAGATATCGATTGCGATGACAATTCTACGAGCGTTACCGATGTAACCATTAATAATCTGAACGATCTGAACGATGCGGTTGTAGGGGATTCAGATGCCAAAGTATTGACACTGGCTGAGCATATAATAGCTGCTATGCCGGAACGCATAAAGAATGAAGCCGATGAAATGATGGTTTTGGGCAGTCCATTGACAGAGCCGCTCACATCAGAGTCTTCCGCTTTGACCGATAGTTTCATGGATCCCCTTCTGGATTCCCTGCCGAACACGCATTTCGATAGCGATTTCAGTTTCGACTTCCCTGATCACAGTTATCGCTACCACGATGTTAGTACTCCCTGCTCGAGTCTTAGTCCCGCCAGCTCGGGCCCTCTACAATCTCCCGCTAGTTATTCCATTTTGGGCACTGATCCATCAGTTAGTTCACCAAGTCCACCACCGTCAACCAAGCAGCTGACCGAATTCTTGCATGCCTCCAGCATTACTCAGTATCCGTTCGAAGCAGATTTTTCAAAGCTAACGCTGACCGACACTGAACAACGTGAGCTTTACGAGGCTGCCAAGTGCATCCAAAAAGCCTATCGCTCATACAAGGGCCGTCAGAAACTGGaggaacaaaacaaagaacGAACTGCGGCCATCGTTATACAGAATTATTATAGACGTTATAAGCAGTATGCATATTACCGGCAGATGACCAATGCAGCCTTGGTTATTCAACACGGTTATCGTTCGTATCGAAGAAATAAACGATTTAAGAAATCCCAAAATACCCCGAACAGCTTGAGTTCGTTGGGAGGTGGTAGTGAGCATGGCAGTGTTAGCAGTAATTCACAATGTCTCTCCAGTTTCTATGATCACTATAAACAggatcagcagcaacaacacgaGATGAATTCCCAGCCGAGCACACCCAAAGAAACTAGTCCATCGGGTCCCTTAAAACGTACTTACTCACAATCAACGCAAAATCAAGCTGCCAGAAAAATTCAACAGTTTATGAGACAATCACGCATCAaACTTCAGAGAGAACGAGCCGAAAAAGAGAAGCTGGTGCACCAACGCAGGGCGGAATACCTTCAAAACTTGCAGTATCAAGGGCAGCAGTTGGAAATGTCAGTGTGTCACAGCGAAAATGAGTAA
- Protein Sequence
- MAGYRALPLAPVTASSMTATVAAPPPPSGHVPTMSYAHHQSMTAMSNNGIIYQSAVHASIHSLNTVQSQHRSSTTHHHILATATAATVAATSAALPPTAATLAAAATNLQQQQQVPQHRDMSGYGNQQQHHMQQQQQQQQQQQQQSLQASQQQHQQSQQQQLMLHQQHQQLLPHPQHLVHHHHHHHHQQLSLHQNHLYFSGTSLGGPNHHHHHRQIFSHLQSALMPLSVNGEPIKLPDNLESLPRADSFPSQRHRWNTNEEIAAILISFDKHSEWQSKEVKTRPKSGSLLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTECIYGCYVHSAILPTFHRRCYWLLQNPDIVLVHYLNVPYPDDNKMAVIAPSITLWGDKKEWTKEELVSQLKPMLSTVNSDDDSDSGNDIEISTAETVESIVCQLMEKQRLSRQAALVKQLDCGCGDASCADGKSCSHPVMRRTGIVKSVSEKRITMNEGYNHNGASGTPNVVVATKLYSRWSERHRQREAMHLDNPHSQYHTATQQLPQESAIKFQIIPPQQQQQQQQQQHLQQSSHGEGNYQQQYRGNQMLATRNNLMLQQQQHHHQQLQQQQQHHTNYHQQQQQLSLQRFVASHNQASGNNNSSSNPGHLNHRLQIANTTITATTREAAAAAAATTTTSASNVMETELIENQSHITTNANSNKINHNTNNCNNNSNNNSISNVGKQLVSATGGGSEEGAVQTTQTNNELNAVNNNGNGSSSNANSNTNNNFLYSQQQQQLNASNTSTQQHYYKLQQAVLVGSHSALTPASHSSPAVEAMCMSPEHHSTRSNNNNTTNSNKNTTSNNNQPLLTATSSTSNSTPLTSSSVTSSTSSSLQSIIDGNQQQQIATTARAAAAATEATNSTAATATVTCDNLMSANALTELTEANGNNSSNSNTNGNNNNQSIDGHKNHNGCANFSASSDNSSQISGSDESSFGAMELNVNANNQNSNSNDDDLEATQAVHNNETLGFFNETLDLSHEDIQRTLIANMPFNNNNSNHSNNTNSNANNTTISTSETSSKADEQRHGNVVELGRVSVRTNEDNEGNDEDTDDVFANLDAFDMLVEFPELDLDDKQALTNTAIEQGQGLQTGVSYLSESSATTLVPATQCDRKLLNICDFSPEWSYIEGGVKVLVAGPWTSNSTYTVLFDSQPVPTVLVQEGVLRCYCPAHEVGFVTLQVTCDGFLVSNSVMFEYKMSLLADAPFDASSSNDCLYKFTLLNRLSTIDDKLQVKSENELTSDHTELYLEPNFEEKLVAYCHKLTKNSWGTTTNATWSVGLRGMTLLHLAAAMGYSKLVCAMLNWRAENPHIILETELDALSRDVHGYTPLAWACVRGHLECALILYKWNHNALKIKTQAQQTPLDLANLKGHRLILGQIYRLEKERCRKNQTRGPFASLSMNMGRNIHGTDTDAEEHGYSAYELELQRKHDGVFLRPVALQSNQSPPNNSRYSKRSSIDSGINMDIRTKSGKSLSRLHGNFESHDSFSLGVESPLDTLSATNSLLSPLRKMDFALCEVSTGESSPLHEKDIDCDDNSTSVTDVTINNLNDLNDAVVGDSDAKVLTLAEHIIAAMPERIKNEADEMMVLGSPLTEPLTSESSALTDSFMDPLLDSLPNTHFDSDFSFDFPDHSYRYHDVSTPCSSLSPASSGPLQSPASYSILGTDPSVSSPSPPPSTKQLTEFLHASSITQYPFEADFSKLTLTDTEQRELYEAAKCIQKAYRSYKGRQKLEEQNKERTAAIVIQNYYRRYKQYAYYRQMTNAALVIQHGYRSYRRNKRFKKSQNTPNSLSSLGGGSEHGSVSSNSQCLSSFYDHYKQDQQQQHEMNSQPSTPKETSPSGPLKRTYSQSTQNQAARKIQQFMRQSRIKLQRERAEKEKLVHQRRAEYLQNLQYQGQQLEMSVCHSENE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -