Basic Information

Gene Symbol
NCOR1_1
Assembly
GCA_037075145.1
Location
JBAMCM010000428.1:6518-36142[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-07 0.00018 21.7 0.0 4 43 1067 1106 1065 1108 0.97

Sequence Information

Coding Sequence
ATGGAAGCAGCTATACGCTCCTCTTCAGTGCAGGTCGGTGCTCCGCCACCCACAAATAACGCCACAAACGGtggacagcagcaacaacaacaacagcaacaacaacaacaacagcagcagcagcaacatcagattcatcatcatcaacagcaacaacaattacagcaacaacaacaacagcaacgtgTTGGCAGCAatctgcaacaacaacaacaacacaacagtaacaacaacaacaacagcagcagcagcaacagcagcagcaacaacaacaacaacagcaacgcaGCGAACGCTAACGCTGCAACAGCGGCACATACTGTGGTGCATGATAATGGACCCACGTCGTCCCATCATCTacatcatcagcaacaacaacaacaacaacaacagcaacctcAACCAACAGCAAACACAACACAAACAGCTTctaatcaacaacaacaacaacaacaacagcagcagcagcagcaacaacaacaacaaaataaatcatctcagccaaaacaacagcaacaacaacaacaacaggctgCAAATATGTCAGCCTATCAACAGCGTTTACCCGGCGGTGCATCACCTTCACCAATTCATAGGGCTCTGGAGCCTCAATCCCAGCATTATATTAAGGGAATTGGACATTTACAATCGCATCACCCCCCTCCACCGCCCCCACCAACATcccagcatcagcagcagcagcaacaacaacaacagcagcagcagcaacaaatgcatcaccatcaccaccagcaacaacaacaacaacaacagcagcagcagcagcaacatcaacaacaacaacagcatcaggCTCAGGCCCAGGCTCAagctgccgctgctgcggctcagcagcatcagcaacatcagcagcagcaacaacaacaacaccagcagcagcagcaacagcaacagcaacaacagcagcagcagcaatcaaCGCGTTCCGCAGCTAGTCCACTGTCACCGCTGTTACGTGGCGGTGGACCCGGACCCGGTGGTGCCGCTGCTCCGGGAAATGCCTACACCAAATTTGTGGAAGTGCCGCACCGCTATATACAGCCTATGTACGGAATGGGACCGGTCGGTAGCTATCGTGAGAATTCCTTTGCCCGTATACCTCAAATGCCGCCAACCTCGGTACCGGATTACCAGAGAGGCGTCCGTGTGGCGACTGTCCAAGCGGGATCGGCTGGCGGTGGCTGTAAGACTGGGCCAACGCAACAGCAGGCCGGCTCGGCGGTTGTTCAAGTTGGCAGTTTGGCGCCACCAAATTCCAGTGCACCTGGTGGTGTCCTGGTCATGGAGTCCATGTCCCATTATCCCAGTCAAcaaccgccgccgccgccgccacccaCATCAGTCCAATCGGTcagtggcggtggcaatgTCACCACAAATTCTGTGGCAGctgcccagcaacaacaacaacagcagcagcaacagcaacaaaattctGGACCCTCATCAGGAGGATCGGGCACACCCACCAGTGTGGGCAGCGTGGCAAATGCCGGTGGCAGCAGCGGCATAATGGTCGGTGGGCAGCGTGTCTTGCTGCCCCCTCAGCGTCTTCAGTATACCGGCGAGTATATgcacatacaacaacaacaacaacaacaacagcaacaacaacagcagcgccAGCAACAAAACCCGCCAACGGAACCGCCAAGCGGTCAACCGTATAAGAAGCAACGCTTGAGCGAGGTCAATGCCAATATCAATTTGAATCATTTGctgcaccaacaacaacaacaacaacagcaacagcagcagcagcagcaacaacaacaaaggcaatcCTCACCAGCCAATGCTGCAGCCACTCCGATCCAAATGAATAGCAATCGTCAGGGCAATCATGATTTGTTACCACCACCGCTACCGCCACCACAGACAAGCACACAGCAGCAGTCGCCACTGCTGGGAGCACCGCTCATCCAACATgcgccgcagcagcagcagcaacagcaacaacaacaacagcagcagcagcagcagcagtccaATGCTATACTTCATGTAACCCTGCCTAtgccaccacaacaacaacaacaacagccgcaACAGTCCACATCGATAGCCACAGGAACACATACAACCATCTCAAGTCGTTCCAGTGGTTCGGGTATGTCCGGTGTGGTTGTCGGAGGAGCAGGAGGAGTAGAAGGCAGAGGTGGATCGTTAGGAGGTGGAGGTGCTAGCACAGTGGTTATGTCCTCAACTGGCAGTGGTACATAtaccacaaccacaaccaccagTACTTCCATCACCGAGGCCTACCATCCCCAGGTGGAGGCAATTTCACCAACACTGCCTAGTGAGAATGCCGAGGATCGTGTACGTACCACGACCAAAGAGGATTTACTTATGCAAATCCAAAAGGTGGACAACGAAATTAAATGCGCCGAAACGGCCATGGAAACGTTAAGGAAAAAAGAGGAATTCCTCATGCAAACGGCATCTGGTTTTAAAGTACAAAATTCTACGGCCATTTCATCAAATCAACAACCATCTGGTATCGGTAGCACCGATCCCGATATCCAGCCGACCACATCGGAAGCTAGCACCAAATTGGCCTGGAGCACAGAAACGCTGGCCCAGAAAATCTACGAGGCCAATCGTGCCACAGCATTCACCCAACATTCCAAACTGAAGGTGCTCGAGGCGCACGAACGTCCCTGGCTGCCGCTATACAATCAACCGATCGATGTGAACGGTATGCCCGATTTGATAAAGCGTCATCAGACCACCATCCGGGGACCTCTGCTCCAGCATATACGAAAGCTGAAGACCGAACGCTGGGAGCACAATCAGGGTTTGGTTGATAAGTATACCAAGGAGCAGGCCGATTGGCAGCGACGTTGCGAACGGGCCGAGGCGAGTGCCAAGCGAAAGGCGCGTGAGGCCAAGTCCCGGGAATTCTTTGAGAAGGTCTACACGGAGCTGCGCAAACAGCGCGAGGATAAGGAGCGCTTCAATCGTGTTGGTTCGCGCATCAAGTCCGAGGCTGATCTCGAGGAGATTATGGATGGGCTGCAGGAGCAGGATCTCGAGGATAAGAAGATGCGCTCGTATGCGGTGATACCTCCGCTCATGTACGATGCCCACCAGAGGCGTTGTGTCTATCACAACGAGAACGGCCGGATCGAGGATATGGCCGCCGTCCATCAGCAGCAAAAGGAGCTGAATCTGTGGACGGCTGGGGAGAAGGAAATCTTCAAAGAGAAATATCTGCAGCATCCCAAGAACTTTGGGGCCATAGCGGCCAGCCTGGATCGCAAGTCGCCCCAGGACTGTGTACGCTATTACTACCTCAGCAAAAAGACGGAGAACTATAAGCAATTGTTGCGCAAGTCGAGACAGAGAACGCGCAGCTCCCGCAATCCGGCCAGGGCCCAGGCCACCCAGCCGCAGTGCATTATTGATTCGCTGACAACGGGTGTGACGACGCGACTGCAGCgtgagcagcagcagaagtCCGGTGGACGCTCCTCGGCTGTGGGTGAGCGTGAGCGGGCCGAACGGGCGGCGGAGAAGGCGGCTGCCGATGCGGCCAAGGCAGCCGAGACGGCGGCCGACAAGGCGGCCAAGCTGATCGAAGTGGCCTGCGGTGGAAAGGCTAGTAAATCTTCGAACACGGCAACCTCGGCCTCGGAGAAGGCGGACAAGTCGGCGGCGGGGGTCGCGGATAAGACGGCCGATGCCAGTGGCAATAGTGAAGTCAGTCCGGCCAGTACGAGTACAGCTAATGCCATTGCCAATGCCGGCAGTAgtagtagcagcagcagctcgaCAGCCACCAGCAATACCACCAGCAAGTCCAAATCGAAGGCTGCGGAAACGGCCGAAGAGTTGGCCAAATCCACGGAAGATCCCGCAGTTAAGACTTCCCTGGCGGCGGCCAACTCAAAGGCAGAGGCAGCTGGCAAATCTGCGGAAACGTCAGCCACGCCTGCTGCGGAGGGACAAACGGAACAGaccagcaacaccagcagcaccaccagtaccaccagcaccaccaccaacacggccaccaacaacaagggCAAGGCCAAAATTAATGCAGCCGATAGTCAGCAAGgTAAATCTCTGGGCAGCTCAGCTGCTGGAGGGATTGGCAAGGCCCCTATTACTTTGCTCAAGTCATTGAATGGCTTTAAGCCAGGCTATCAGAATCTGGTGATGCCGAATGCCAAGCCGGGTCAGCCGGCTAATGcctcaaataataataataataacaacaacaacaacaacaataacaacagcatcaGTACGGAAGAGAATTCGGCCGGAGGTGCTGCTGGATCGATCAATTCGTTGAGCAAGACGCCAAGTGGGGTCACCTCAAATGCCTTTGCCGTGCCGCCGGCCTCGACCTCCGCCTCGACGATATCCTCGACAAATaccagcagcagtggcagtagTTCCGGTGTGGTCACCACCCTGACAACGGCCACCACGGCTGGCAATTACCTGGGACAGAAACTGAAGGCTGCCCAAGTGGAGAATATGGGAGCTGGCAACGATCTGCATTCGGATGCTAGtgatcCCAAAAAGAAACGTTTCGATTTGGATGGTGGCACTAATTCCGCCGCCAACAGTAATGCGAGCAACTCGACTGCAGCCACAAATGCCAGCAATGCCGGttcaacaaataacaacaacaacaataataataatactaacaacaataacaataacaatgccaacaacaacagcagcagcaataataAAGGCAGCAATGCCAAGGATTCAAATATGCTGGGCATGCCGAAGCCAggattgcttttgttgccCTGCGGCGTTACATCGGCACCGGCCACGGCCACCACGGCAGCGGTGTCCTTGGTTCTGGCCACGGCCAACACGCAGGCCTCAACTATCACAGATGCTAGTGGTAATTTACTGACCACTTCGGAAATCATCAATCTGGATGGCAAAGTCAAGGGAACGAAGGGCTTGGAGGGCTTAGTTGGATTGATGAGCTCGAAGAAATTGATGGAATTGAAGATATGGAAGGTATTGCGGGGATTCAAGAGCTTGAAGATCTCGGCTGGATTAGGGAGCTTGAAGAGCTCGATGCGACTGGAGGGTTATCCCATGTGA
Protein Sequence
MEAAIRSSSVQVGAPPPTNNATNGGQQQQQQQQQQQQQQQQQHQIHHHQQQQQLQQQQQQQRVGSNLQQQQQHNSNNNNNSSSSNSSSNNNNNSNAANANAATAAHTVVHDNGPTSSHHLHHQQQQQQQQQQPQPTANTTQTASNQQQQQQQQQQQQQQQQQNKSSQPKQQQQQQQQAANMSAYQQRLPGGASPSPIHRALEPQSQHYIKGIGHLQSHHPPPPPPPTSQHQQQQQQQQQQQQQQMHHHHHQQQQQQQQQQQQQHQQQQQHQAQAQAQAAAAAAQQHQQHQQQQQQQHQQQQQQQQQQQQQQQSTRSAASPLSPLLRGGGPGPGGAAAPGNAYTKFVEVPHRYIQPMYGMGPVGSYRENSFARIPQMPPTSVPDYQRGVRVATVQAGSAGGGCKTGPTQQQAGSAVVQVGSLAPPNSSAPGGVLVMESMSHYPSQQPPPPPPPTSVQSVSGGGNVTTNSVAAAQQQQQQQQQQQQNSGPSSGGSGTPTSVGSVANAGGSSGIMVGGQRVLLPPQRLQYTGEYMHIQQQQQQQQQQQQQRQQQNPPTEPPSGQPYKKQRLSEVNANINLNHLLHQQQQQQQQQQQQQQQQQRQSSPANAAATPIQMNSNRQGNHDLLPPPLPPPQTSTQQQSPLLGAPLIQHAPQQQQQQQQQQQQQQQQQSNAILHVTLPMPPQQQQQQPQQSTSIATGTHTTISSRSSGSGMSGVVVGGAGGVEGRGGSLGGGGASTVVMSSTGSGTYTTTTTTSTSITEAYHPQVEAISPTLPSENAEDRVRTTTKEDLLMQIQKVDNEIKCAETAMETLRKKEEFLMQTASGFKVQNSTAISSNQQPSGIGSTDPDIQPTTSEASTKLAWSTETLAQKIYEANRATAFTQHSKLKVLEAHERPWLPLYNQPIDVNGMPDLIKRHQTTIRGPLLQHIRKLKTERWEHNQGLVDKYTKEQADWQRRCERAEASAKRKAREAKSREFFEKVYTELRKQREDKERFNRVGSRIKSEADLEEIMDGLQEQDLEDKKMRSYAVIPPLMYDAHQRRCVYHNENGRIEDMAAVHQQQKELNLWTAGEKEIFKEKYLQHPKNFGAIAASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPARAQATQPQCIIDSLTTGVTTRLQREQQQKSGGRSSAVGERERAERAAEKAAADAAKAAETAADKAAKLIEVACGGKASKSSNTATSASEKADKSAAGVADKTADASGNSEVSPASTSTANAIANAGSSSSSSSSTATSNTTSKSKSKAAETAEELAKSTEDPAVKTSLAAANSKAEAAGKSAETSATPAAEGQTEQTSNTSSTTSTTSTTTNTATNNKGKAKINAADSQQGKSLGSSAAGGIGKAPITLLKSLNGFKPGYQNLVMPNAKPGQPANASNNNNNNNNNNNNNNSISTEENSAGGAAGSINSLSKTPSGVTSNAFAVPPASTSASTISSTNTSSSGSSSGVVTTLTTATTAGNYLGQKLKAAQVENMGAGNDLHSDASDPKKKRFDLDGGTNSAANSNASNSTAATNASNAGSTNNNNNNNNNTNNNNNNNANNNSSSNNKGSNAKDSNMLGMPKPGLLLLPCGVTSAPATATTAAVSLVLATANTQASTITDASGNLLTTSEIINLDGKVKGTKGLEGLVGLMSSKKLMELKIWKVLRGFKSLKISAGLGSLKSSMRLEGYPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-