Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_037075145.1
Location
JBAMCM010000100.1:11140499-11153815[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-09 2.6e-06 27.6 0.1 2 45 1818 1861 1817 1862 0.94

Sequence Information

Coding Sequence
ATGGCTGCCATAAATACGGTACCAAAGAGCATACATCTGCCTTTGTCAAGTCTGAGTACGCCGCGCGTGTTGATGTGCAGTGCCTCTGTGGGAACTGAAGGATCTGTGACACTCCAACTGAGAGATGCTAATGTTCTGGAAGCAATCAACAcaagcagtagcagcagcatcagcagcagcagccacagcagtaccagcagcagcaacaacagttcACCAACGGGGATAACAAACACATCGACAGGAGCAACAAACTTAAATAGTACAATCATACCAACAGCCAACACAGCCAGTCAGACAAATGGCGTCACAGCAATCGCGACGTTGTCAGAGGCAACGTCGACGTCAGCATTAGAAAATGCTTTGACCATTGGCTATCCGGATCCGGATATGTTGGCAGATGTCTTAGGCACAATACAGACAGCCTCTCTTAAGAACAATCAcgcaaacagcagcagcaataactTAGTAGTCGCCGCAGTAGCAACTTCAAGCAATACTACCAAcgtagcaacagcaacaacaacaacaacagcagcagcagcaacttcaACGACTGGCCATCACCATCttcatcagcatcagcatcatcatctaAGTAGTCCTAATAAAATAACCATAACACGACGCAATACAAACGCGAATCAGGCCAACCATAAAATAACCGTACAAACAGTGTCCACCTCCACAAATACCAgtggcaatagcaacaacagcgGCCAAAGTGGTAACGGCACAGGCAGTGGGAAAACCAATACCAGCTATATCAAGAACTGTCTTAtacgcagcagcagctgcagcaacaCGGCCACCAATGTCACGACTCTGGCCCAGATTATGAGCAatagcagcaccagcagcgcAGCCAGTTTACTCaatcaacacaacaacaacagcaattgtagcaacagcagcaatttcAGTAACGCCTCATCCGTTGGCAGCAGCATTAGTGTTAGCAGTGGCAGTAGCAACAATAGCAACGACAGCACCAGCAACCACAGTTTGAATTTTAAGAGCAACGGTAAAAATGTTCCTGGCCTAACCAACACTaacagcaacggcagcaacgccagcagcagcagcaacgtcAGCAACACCACATCAGCAGCCACAAATACCACAACATCAAGCATCGTTGCACCAAAGAAGAGCCGCCCCAAATTATCCTCTCCAACGCGACACGGACCGCAACAGTGTCAGATTTGtagtaaaatttttggaaatgccTCAGCGCTGGCCAAGCACAAACTGACGCACAGCGACGAACGGAAATACATTTGCGCGCTCTGCTCAAAGGCATTCAAGCGGCAAGATCACTTAAACGGACACATGATGACACATCGGAATAAAAAGCCTTACGAATGTAAGGCGGAGGGCTGTGGCAAATCGTACTGCGATGCCCGCTCCCTGCGACGCCATACTGAGAATCACCATGGAGGCGTGGTCACGCCCACAAATCAGTCACTCTCACCCACAGCCGCCCCGAGTGGCGGAGGCAGTAGCAGtagcaatagcagcagcagcagcagtgtgGCCACCAGCACGCTGAGCTTGTCGCCGGCCACGGCCAGCGGGGATGCTAGCTCGCCAGATGGCGCCACCTGTATACGTACCTATATATCCACAGGGGGGTCTGTGGTGGACGCAGCCACGGGCATTGCCCTGTCCGAGGAGCAAATTAAAGCCATGAATTTACCCATCAAGACGGGCGTGACCCTGCTCTCGCCCACCACATCGACCTCTTCCAATGCCTCCTCCACGACTTCTTCGTCAAGTGGTGGTGGGAGTGGAGGCTCTCTGGTGACCAGCTCACCCACCATAACACTCAGCGATGGAGCCACCCTAGAGGGTGAGGGCCTGACTCGAGAGCAGCTCGACTTGATCAGCAAGATCATGCAGCAAACCAAGCAGACCAGTGCCCAGGTGACCGTCTCATCGCCTACCAGTGTCAATTCCTACAAAATCAATACAGAGACGGCACCGACCCAAGCACGTCCACGCACCTGGAACATGCAGTTGCTCAACAGCTCACAGAATGTGACTGTGACCGTGGAAGATAGTACCACCGATTTGGTAGTAGCGCCCTCATCGACCTCCCCGCAGGAAGTCAAGGAGGATGAACTCAGCCCACAGCTAGTGGCTGCCATTAATCCTCACTTGCTCAACATTGTCAAGATCGAGAAACCCGTAGAGTGTAATCTCTGTCACCGTAAGTTCAAAAATATACCAGCCCTGAATGGGCATATGCGTCTGCATGGCGGCTACTTTAAGAAGGATCCCGAGACAAAGCGTAATGAGAAAAAGGATCCCAGTGGACCGCCCCTACAGACAGCCAGCATTGGCGTGCGTGCTTTGATTGAGGAGAAGATCATAAGCAAACGCAAAGATATAACAAAGGGTGCCTTCGTAGTTCCTGCACCACCTGGTAGCGTAGCCAGCAATACCACCACCATCCGTCGATCGATTAGCGATCTGGAGAATTTTCTCAACCCCAAGTCCCAAGCCAATAGTTGTAGCAATAGCAGCATAACTCAGACAATGTCCAGTGGCACCACCACGACAGTTCTGCCGGCTGCCACCACAATTAAGAGTAGCAATGGTCTGAGCATCCAGCAGATTGGTCTGCCTCAAAGCATTGAGATCTTCAGTAGCGGCCAAAAGCAGCAGAAGACCTTGAGTTTGGGTAGTGGTGCCAATACCATAACTATAACCACCAACAATGTACCCACCACGGCCACCATGGGCTCGTTGGCAGCTCTGGCCAGCGGTGGAGGCCAAAAGATACACAATGCCACCGATCCGAAGGATTCCACCCTCATCGAACTACTGAAGCGTGGCACACGGATTGCTGTCACCGCCAAGAAGACACAGTCTCAAGGCCAGATCCAAGCCCAGAGCCATACCCAAACCAGTACAAATTTACTGATGAGCAGCAGCACCGGCATCCAAAGCAGTGGCGAAGTGGCCACCATTACCACCACTCAAACTGGTCGCCAGATTATAACCAACAACAATCGCACAGTCATCATACCCTCCGACGTCCAGGTAGTCTCCACCAAAAGTAAATTGAGCAGTCTGAGCAACCTGACCACCAGCACGGCCAGCACCAACACAAGCATCACGCGATCCTCCACACCGGCCAGCATTTCCCTGCCGGATGGCACACCCCTATCCCTGACCATTGCACCCAGCAGTGAAAgcaatggcagtggcggtggagACGTTTACACCGTTACCTATACCAGTGACACTGCTGACTTCTTCGACGACGCTGAGGTGTACAATGTATCCGATACGGAAATGTTGTTGCAAACTGTGGACACCATGGAGCTGCTCAACGACGAAGACGTCGAAAATATTAAGACCGAACATTCCGACGAGTTTGCCCTGGTCACAGCCGGTGAGCCCGGCAATGGCGGCCAGACGCATCTTGTCAAGCTCGAACCCGAGTCCAATTGCAGGCAGATTATTAATAGCAATGTGAATACCgtcaccaacaccaccaccaccgcacTGCCCACTTTCCAGCAATTCCATTCCAAAGAGATCATCATGCAGAACAGTTCCCAGATACAGGCCATTGCCAATATGCGTACCAGCACACTCACCTTGCCCGCCGATCTGAAACAACAGTTGGGCGTGCTGGCCTCGCCGCTCCACTCACCGTTGGCCTACCCCACGCCACCTTCCAGCCATGAGAATGTGGCGCAGTCGTCGCCCTTCATTGAGGATGCCGCTGCCCAGTTTGTGGACAGCAGCCACACATTTTTTGGCGACAAAACGGACTTCTCTCATGTCTATTTCAAGACGGACGACTCTGGCCAGCAGGAGCTCAGTGACAACGAGAAGATTCTCAAGCTGAAGAGCGTCTTGGAGGAGAGCGCCTTTGATGCCTCCATCAAAGTGGAAGATCTCTTGAACAGCACAGAAGACGATGCCGAGTGTGATTTGCGGGAGTTTGCCGAAACGAATCTCTCCTTCCTCGATGAGGATCAAGAGTTTCTCAATGACTCCCGCAATGCCACTTCACCCCTCTCCGAGTCCTTCTTCACCAGTGGCATAGGCTCTGCCGAGGAGGTAAAACAAGTCCTGCGCGAGGTCCTACCCGATGAAAATATGCAGCTGACCACTGAGCAACAGGGTGAGAATATAATTGATCTCTACTATTTGCCTGGCCTGGGCCTGCAATCCCAAATGATGCCCAACTCGGAGGACCCACTCCTCTCGTCTTCACCACGTGAGTTCGGTCAGCAGAGACAAGTGCAGCTGCAAAACCAGGCTCAGGTCGAGACAGTCGATCCCAATCAAATGCAGGTGCCGCAGCTCTACCAGCAACAGCTGCTGCCACAGCAGCAACTCACCAcggaacaacagcaacagccccTGACTCAACAACAGCAGACAGACTTCATCTTACCCATGGTCAGTGGTGGCACGGTCACTGGGAATACCCTGTCATATGGCAATGTGCAAGCCCTCGCCCCAGTACAAAACCAGACGCAGTTTTTGGATGCCagtcagcagcaacaacagcagcagcaaccacagGCAATGGGGCTGCAGCCAATGAACAATCTGCTTCAACCTTTGCTCTATAGTGGCACAGTGGACAATAATAATGTGATCACCCTGGGCTCCGAGCATAAAGAGGTCCAGATGATTACCGATAACAACCTTGGATTGCTGGCCACTGATTGCAGCAACAATGTcaataatcaaaatgcactggAGAGCAGTTTGTTTttcaactgcaacaacaacaataatggcAAGCCCCTGTTGACCACAATGCCCATGATGGCTGCCCAGGTACAAGCTCAGTCACAGACTCCCACATCCAGTAGTATACCGAATCACATGGGCATAACCAACCTGCAGCCTCTTTCGAATCAAACGAATTCCATACTCAAGCGTAGGCTGCGTCCGAATGGTTCGCAGGATACCCAAAACTTCTCCAAATTCCAAACACTCTCACCACATCGCTCTAAGCTGCGCAAGCCATCGCGTACTCACTACACACCGGCACCCATTCTGAATCCGGATCGCAAGGGGACGGGTCTCTATTGCAATGTGAGGAAACAGCTCAACCAAGGCTTGTTCGATGTGTTCGACGACGACTTCGGGGATCCGGTGTGTCTGGTGGACTTCTGCGATGAGTCGAAGGTAAACTTGGGCTCGGCCTACCAGGCCCAGATACCAGCCCTCAAGCCAATAGAAAATCCAGTCGAAGTGGTAGATGCGGAAGACATAGGTGATCAGTTGATGTGGGATCCAAGTGTGCAGCTGGACGAGAAGATACTCATGCGCTACATAGATCTCAGCAAGTCGTCAGCCGTGCCACTGGGTAGCCACTCCGAGGAGGTGGCCTTGCAGACACTGCTGCAGGCTCAGGGTAACTCGGCGGCAGCTGTGCTCACACTCCTGCAGACACAATCGGGGGCCTTCCAAATGAAATGGAGTGCTCATGAATTGGAATTATTCCTACGCGGTCTGGAGAAGAACGGCAAGGATTTTGCCAAAATTTCCAAGGAGCTTACCACCAAGAGTGCTGGAGACTGCGTACAGATGTATTATTTCTGGAAGAAACTCTGTGTGGATTATAAAGTTTCGCATTTGAAAATGGAGCCAGTCACGCCAACGACTCCAGTGGTGGAGCAGAAACCCTATGTCTGCGAAATTCCCGATTGTTCAGCGAGCTTCAGTTCGAAAGCGGCGCTGCACGGCCACGTACGCATACACGCTTATGGTAGAaataccagcaacaacaacaacaacaacaatcagcatgccacaacaaataattccaattccaCCAATACCaccaacaactgcaacaatacttccaatgccaacaacaacagcagcagctacgCATGTGCACCCTTGGGCAGTAACGgccatggcaatggcaacggcaaccTGAATTCATTAGCGGCACaccaaaacagcaacaataatagcaacaatagcaacaattcCAATGGGGTCAATAGTTTGGCCGCCAccacctcctcctcttcctccACCGCAATGGCTAACAATCAAACCAAAGAAACGAACAATCCGACTACGAATTCAACCAATGCCAAGGAAGGTGAATTCCCCTGCAAGGTGTGCGGCAAAGTTTTCAATAAGGTGAAGAGTCGCAGTGCTCATATGAAAACGCATCGCGTCCAAGAACCCGAACAATCTGCCAATCGCAAACAACAGGATCATCACCAGCAATCGACAGCCCAGTCATCCCTCGTAGCTTCGGCGACGGCCTAG
Protein Sequence
MAAINTVPKSIHLPLSSLSTPRVLMCSASVGTEGSVTLQLRDANVLEAINTSSSSSISSSSHSSTSSSNNSSPTGITNTSTGATNLNSTIIPTANTASQTNGVTAIATLSEATSTSALENALTIGYPDPDMLADVLGTIQTASLKNNHANSSSNNLVVAAVATSSNTTNVATATTTTTAAAATSTTGHHHLHQHQHHHLSSPNKITITRRNTNANQANHKITVQTVSTSTNTSGNSNNSGQSGNGTGSGKTNTSYIKNCLIRSSSCSNTATNVTTLAQIMSNSSTSSAASLLNQHNNNSNCSNSSNFSNASSVGSSISVSSGSSNNSNDSTSNHSLNFKSNGKNVPGLTNTNSNGSNASSSSNVSNTTSAATNTTTSSIVAPKKSRPKLSSPTRHGPQQCQICSKIFGNASALAKHKLTHSDERKYICALCSKAFKRQDHLNGHMMTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHGGVVTPTNQSLSPTAAPSGGGSSSSNSSSSSSVATSTLSLSPATASGDASSPDGATCIRTYISTGGSVVDAATGIALSEEQIKAMNLPIKTGVTLLSPTTSTSSNASSTTSSSSGGGSGGSLVTSSPTITLSDGATLEGEGLTREQLDLISKIMQQTKQTSAQVTVSSPTSVNSYKINTETAPTQARPRTWNMQLLNSSQNVTVTVEDSTTDLVVAPSSTSPQEVKEDELSPQLVAAINPHLLNIVKIEKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDPETKRNEKKDPSGPPLQTASIGVRALIEEKIISKRKDITKGAFVVPAPPGSVASNTTTIRRSISDLENFLNPKSQANSCSNSSITQTMSSGTTTTVLPAATTIKSSNGLSIQQIGLPQSIEIFSSGQKQQKTLSLGSGANTITITTNNVPTTATMGSLAALASGGGQKIHNATDPKDSTLIELLKRGTRIAVTAKKTQSQGQIQAQSHTQTSTNLLMSSSTGIQSSGEVATITTTQTGRQIITNNNRTVIIPSDVQVVSTKSKLSSLSNLTTSTASTNTSITRSSTPASISLPDGTPLSLTIAPSSESNGSGGGDVYTVTYTSDTADFFDDAEVYNVSDTEMLLQTVDTMELLNDEDVENIKTEHSDEFALVTAGEPGNGGQTHLVKLEPESNCRQIINSNVNTVTNTTTTALPTFQQFHSKEIIMQNSSQIQAIANMRTSTLTLPADLKQQLGVLASPLHSPLAYPTPPSSHENVAQSSPFIEDAAAQFVDSSHTFFGDKTDFSHVYFKTDDSGQQELSDNEKILKLKSVLEESAFDASIKVEDLLNSTEDDAECDLREFAETNLSFLDEDQEFLNDSRNATSPLSESFFTSGIGSAEEVKQVLREVLPDENMQLTTEQQGENIIDLYYLPGLGLQSQMMPNSEDPLLSSSPREFGQQRQVQLQNQAQVETVDPNQMQVPQLYQQQLLPQQQLTTEQQQQPLTQQQQTDFILPMVSGGTVTGNTLSYGNVQALAPVQNQTQFLDASQQQQQQQQPQAMGLQPMNNLLQPLLYSGTVDNNNVITLGSEHKEVQMITDNNLGLLATDCSNNVNNQNALESSLFFNCNNNNNGKPLLTTMPMMAAQVQAQSQTPTSSSIPNHMGITNLQPLSNQTNSILKRRLRPNGSQDTQNFSKFQTLSPHRSKLRKPSRTHYTPAPILNPDRKGTGLYCNVRKQLNQGLFDVFDDDFGDPVCLVDFCDESKVNLGSAYQAQIPALKPIENPVEVVDAEDIGDQLMWDPSVQLDEKILMRYIDLSKSSAVPLGSHSEEVALQTLLQAQGNSAAAVLTLLQTQSGAFQMKWSAHELELFLRGLEKNGKDFAKISKELTTKSAGDCVQMYYFWKKLCVDYKVSHLKMEPVTPTTPVVEQKPYVCEIPDCSASFSSKAALHGHVRIHAYGRNTSNNNNNNNQHATTNNSNSTNTTNNCNNTSNANNNSSSYACAPLGSNGHGNGNGNLNSLAAHQNSNNNSNNSNNSNGVNSLAATTSSSSSTAMANNQTKETNNPTTNSTNAKEGEFPCKVCGKVFNKVKSRSAHMKTHRVQEPEQSANRKQQDHHQQSTAQSSLVASATA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01319321;
90% Identity
iTF_01319321;
80% Identity
iTF_01319321;