Slat005247.1
Basic Information
- Gene Symbol
- rcor-1_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000123.1:2873621-2874949[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.2e-07 0.00088 19.5 0.2 4 45 174 215 172 216 0.96 2 2 2.7e-07 0.00033 20.9 0.0 4 46 342 384 340 384 0.92
Sequence Information
- Coding Sequence
- ATGAGTGGCAACGGGTCTGGAGAGCGTCCGCGATCTTTGCGCTTGAAGCAGTTGCAAAagcttcaacaacaacatcaaccaGCAGGATTGGTACCGAATTCCATGAGATATGGAAGTTATCGCTTCAAGCCAGATCCGACATTTTCATTGGATTTGGATGACGACGAGAAAGGAAAAGTGGTAGATCATTTGACTCCACCAAGACATCATGTTTTGCGTACTGGAACACGTGGGTATGTAGACAAAGTGGGCATTGGTCCGGATCATCAAGTCGATGTACCCGACTGGGTAGAGCCAACGGTAAAGGCGGCAGATTATCGCGAAGATAGCGAAGTGGAGACTTTAATTTGGTCTCCCAACAAAATCGTCAACGAAGAAGAATTACAAGAATATATGGGAGTGGCCACCAGGACCAACAACTTCAGTGTGGAACAGGCCATCACCATGTTACAGGCTCATAATTATGACTGTGGGACGGCTCTGAAACAAGTGGCTCGCTATACAAATACCCAGGCCTTGTGGTCTGCAAATGAGAAGCAGCGTTACGAGCTACTTTTGAACCGACACGGCACACGCTTCGACAAAATAAAGGAGGCAATGCCATGGAGATCCATCTCAGAATTGTTAGATTTTTTCTACTCTTGGGCACCGGCTCAAAATGAACTGAGCTACCCTCAGCAGGTTGTGACCTGGAGAGCCCTTAGGACTCCCAATTCTCAGAGCACGAACTCGGCTTTAGGCGTAGCACCCAGGATCAAAATTCCGGTCCTGCCATCTCCCCTGCTGCCCCAGATGGAGCAGTTGGCCCCAGAGCCACCCGTGAAAAACGAAGATTTGCTGGCCCTGGCTCAAGACAACACTAGCGGTTGGCAATGCACCGATTTCATAACTCAAGTTGGACTTTTACAGTCGAAGCTCCTCATGCAGCGTTCGGAGTTGAAAAACAAGGCAGATACTTGGCTAGACGACTGCGATGAATTGCGTCGGGCCCTGAAAACTGGCGGCTCTCGCAACTTCCGTGACTGGAGAATCTTGGAAAAGCAGCTGATGGTCTTGGCTTTGGATGAGCATggtcaaaattttgatttgatttcgcGCATTGTACGCAGCAAGACTGGGCCACAGGTCCGGAATTATTATATCAACAATCTGGCGGCATTTCAGCGACATGCTGAACGGGCAATGTCCCCCAAATCCGAGGAGGATCTAGTTATCGAGCCCTGCGAGATGATGGACGTCGATGCTGGTCTGGAGAAATTTGATGTGATTATGGATTGTGAGCCCACCCATGAGGCCGTCACTGATGACGACATCATCATGATcgaataa
- Protein Sequence
- MSGNGSGERPRSLRLKQLQKLQQQHQPAGLVPNSMRYGSYRFKPDPTFSLDLDDDEKGKVVDHLTPPRHHVLRTGTRGYVDKVGIGPDHQVDVPDWVEPTVKAADYREDSEVETLIWSPNKIVNEEELQEYMGVATRTNNFSVEQAITMLQAHNYDCGTALKQVARYTNTQALWSANEKQRYELLLNRHGTRFDKIKEAMPWRSISELLDFFYSWAPAQNELSYPQQVVTWRALRTPNSQSTNSALGVAPRIKIPVLPSPLLPQMEQLAPEPPVKNEDLLALAQDNTSGWQCTDFITQVGLLQSKLLMQRSELKNKADTWLDDCDELRRALKTGGSRNFRDWRILEKQLMVLALDEHGQNFDLISRIVRSKTGPQVRNYYINNLAAFQRHAERAMSPKSEEDLVIEPCEMMDVDAGLEKFDVIMDCEPTHEAVTDDDIIMIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -