Slat000951.1
Basic Information
- Gene Symbol
- F54F2.9
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000073.1:5465217-5466932[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-08 6.4e-05 23.2 0.0 4 38 305 342 302 343 0.88 2 2 7.4e-09 9e-06 25.9 0.3 3 43 396 441 394 443 0.81
Sequence Information
- Coding Sequence
- ATGCACTCCAGGACTTTAGCCTCTACGGTGGGCTGCCTGCTACTGTTGCTGTGCAGCCCAGCTTTCGCTTGGCACTCCGAAGATCTGGAGATTTTCGATGTAGTCGAAGAGGTTAACAAAAGTTTTTACGAATTCATGGGCATACAACAAAATGCCAcgaataatgaaataaaacgtGCCTTCCGCACTCTATCCATCGTTCTGCATCCAGACAAGAATTCAGCCGAAGATGCCAATATACAATTCCGTAATTTGGTTTCCATTTACGAGATCCTCAAAGATCCCTCTAAACGTGAAAAATACGATAAAGTCTTGCGCGACGGCCTGCCCAACTGGAAGTCAGCTCTCTATTATTATCGTCGTATGCGTAAGATTGGACTCTATGAGGGTGCCTTCATTCTGTTCCTCATTATCACGGTGGGTCAATATCTCTTCGCCTGGGCCGCCTACCTCGAGAAAAAATACACTGCCGAACAGGTCTTTGGCACCAAGCTGAAGAAATtgcagaagaaaaacaaaaacattgataTGGACGTGATACTTAGTGAAATACCCATGCCTTCCTTGCTCAACACTCTGCCCATCCAAATTCCATTGGCCATTTGGCACTTGCCACAGACCATTAAGAACGGCTTCAACAAGGCCAATGAACTCAAGGAACTGGCCTTGGAGAAGCGCCGACAaGAACTTGAGGCCGCACGACGCCAAGAGGAACTGGAACGTGAGGCCGAAGAACAGGCACGTCTGCGTAAAGAGCATAAAGAGAATGTACGTAAGCGAAAGCAAAACTCCAAGGCACCCGAAAAGACAGAAGAGGAACTACGTGGCTATTCACAAATTCAAGCACGAGAGCTAACCGAAGAAGATGCAGTGCGTCCGGCCACCCAAAAGAGCACCGTCAGCGGTGGCTTCTGGACCGATGAGGATCTCACTGAATTAATACGCCTTGTGAAAAAATATCCCGGCGGCTCAGGCAGTCGCTGGAGTACCATAGCCGAGTCTATGAATCGCACCGTGCAAGAAGTCACCTTCATGGCagccaaaatgaaagagaacgGCTATCGCATACCCGGCCAAACTGACAGCGTGGCCGAGCAGATAGTCCAGACCTCGCAAGATGCCGTGCGCAAGGAGAAGGTCAAAAAGAATGTGGGCCAAGAGAAGAGCATGCTCATACCCGAGACCAATTGGACCCAGGAGCAGCAGCGTGCCTTGGAGGCGGCCATTGTCAAGTATCGCAAAACAGCCGGCGGAGATCGCTGGCAAAAAATAGCCAACAGTGTGCCCGAAAAGACCAAAGAGGAGTGCCTGGTGCGCTACAAATATCTCTGCGAATTGGTCAAATCCCAAAAGAAGGCCGAAGAGGAGGAAGCTGAGGGCGTAGAAAACTTGACCTCCAAACAGCCCGAGGCTGAGCCTGAGCCAGATCCCGAACCGGAGGCAGAGTCGCCTGAAATAGCTGAGACTCCGGTAGAGACTGAAATAGATCCTCCGGTCtcgaaaaaattaagcaaacgcGAGAAGCGTCGACGTAAAAAGAATCTATCCAGTAGCGATGAAGATTCCGACGATGCATATCAATATGAAATCAGTTAG
- Protein Sequence
- MHSRTLASTVGCLLLLLCSPAFAWHSEDLEIFDVVEEVNKSFYEFMGIQQNATNNEIKRAFRTLSIVLHPDKNSAEDANIQFRNLVSIYEILKDPSKREKYDKVLRDGLPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDVILSEIPMPSLLNTLPIQIPLAIWHLPQTIKNGFNKANELKELALEKRRQELEAARRQEELEREAEEQARLRKEHKENVRKRKQNSKAPEKTEEELRGYSQIQARELTEEDAVRPATQKSTVSGGFWTDEDLTELIRLVKKYPGGSGSRWSTIAESMNRTVQEVTFMAAKMKENGYRIPGQTDSVAEQIVQTSQDAVRKEKVKKNVGQEKSMLIPETNWTQEQQRALEAAIVKYRKTAGGDRWQKIANSVPEKTKEECLVRYKYLCELVKSQKKAEEEEAEGVENLTSKQPEAEPEPDPEPEAESPEIAETPVETEIDPPVSKKLSKREKRRRKKNLSSSDEDSDDAYQYEIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00616831;
- 90% Identity
- -
- 80% Identity
- -