Slat002859.1
Basic Information
- Gene Symbol
- CEF1_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000100.1:14330980-14333282[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.5 7.9e+03 -2.7 0.2 23 45 191 215 190 216 0.66 2 5 1.1e-09 1.4e-06 28.5 0.1 1 44 222 266 222 268 0.93 3 5 0.0002 0.25 11.7 0.0 3 44 279 324 278 326 0.90 4 5 9.2e-07 0.0011 19.2 0.0 2 46 333 378 332 378 0.92 5 5 2.7e-11 3.3e-08 33.7 0.1 3 43 386 427 384 430 0.95
Sequence Information
- Coding Sequence
- ATGGATGATGTGGAGAAAATTCTGGCTGGGCTGACAGAGCTTTTGTCCACCATTGGTAATGAATCCCAGGCCAGTACATCAAATGCATTGAGGGCAAACCAAGAGCTACAAAATCATCTAGAACAGATACGCGCGCAAATATTGAGCCTTCTGAAGAAGATAAGGACACGATATAAACGAAATGAAGAAATCCTCAGTAAACGTCTATCGTTCCGCAACAAAAAAACCGGAGATGGAGGTAATAGCGAAACTGGTGCTATTCTACGCGGTGGCAGTTTCTTATTCAAGGGCAATCTCTATTTCCGGGATGTACACGGACGCAGTTGTCCCAATAATCAGGACTATGAACGTCGCTCTGCCAGTGAAATATTTCCCACCGATTTCGATATGCGCTCCAAACATGTCTGGACCATTCTGGACAAAAAGAATCTTATGACGGGTATCAAGAAACAGATCTTGGATCATATAGCTTTTGataaaaaaccgaaaaagcaaaagcaatcCATTATTTTGCATGAAACGTCCCTGGCCAGTCTGCTCTCGATGGTGGATAGCAGTTTCGTAATCGATTGGCATCAAATCAGCAATTTGGACATACAGTGTAGGCACTCTTCTACCAGCTGTAGAGCCATGTGGGAGGTATATCTGTATCCTCCGCTGAGACGGGATGACTGGGACCAGGAAGAGGATGAGCGTTTGCTGATTCAGGCTAAGCAGAACAACTTACAGGATTGGGCCACAATTGCCGCCAAAGTTGGCCAACGCTCGGATTACCAATGTTTTGTACGATTTCATACGAGTCTGCGCTATTGCATGGATCCTACAGCCATACAGAAATGGGGACCCAAAGATGATGGTCGCCTGAAGACTATCGTggccaagcacacacacaatggtGTGATCAATTGGGCTAATGTGATAGAGCATTTTCCAGACAGACCAAAGTCGTCATTAATCGGTCGCTATGTTTACGTACTTCATCCCAGGATAAGCCATGAGCCGTTCACTGAAAAGGAAGATATCGTTTTATTTTCGGCATATCAGGAATACAACGGCAAGTTCAGTTTGTTTCCACGGGATCTCTTCCCCAATCGTTCGCTAAGCCAGCTGAGAACTCGTTACAATAATGTCCTGGCTCAGCGCACCAAAACCGATTCATGGTCTCAACAGGATGATACTAATCTGATGGAGTTTGTCAGGGAGCATGGTACATCGCAGTGGGTAAAATGTGCAGAATTTCTGGGTAATCACACCCGCACCAGTTGCCGTACTCGGTTTCTGGTCATCAAGCGTTTCCTTGAACAAAATCCCGAGGCAACCGTAGAGGAATTTCCTCGTCGCCGTTCCAACAAAGTCGCTTGTGTCACCCAAGATAATTGGGAGCAACGCTTGGAGGAGCTGAAAAGGAATCCCGAATCGATAAATCTCTCCCCTGTCaagtcgaaaaaaagaaaacgattAACCTCTGAGACAGACAAGCCCTCCTCATATGGCCAAACTCTCCGTGGAATGGACTATCAACtgtatgaatttttcaaatacgCTTACAATCTAAGATTGCGCCAGGAAGTGAATACGTCAACCCCAGCTATCAATCTACCCCGGAATCACGTGAATCTCAGAAGTGTCTTCTCGGCCTTGGCCTTTGAGCCGGCTAAGTATAGAAGCAATCTAATCATTAATTCCCTGGGCCTATCAGGCCTGCTCAATAATTACTACAGTCGAATGCTGGAGAATTGGCCAGCAGCAAGGCCAGACAGCTCTCAAGACCCTCAGCTGCTTCCACCCAACTACTCCACCATAATGGGCTTTCGGGCCATTTGCATACTCTGTGCCCATTGTCACAAATTGGGCTTGCCAAGCGAGGACCGCCTGCCATATGAGGAGTCCCATGAGGCTGTCCAATTATTTAGGCACCGCTTACGAGCTCTCTTCTTCCGCACAGCCCTGCTGAGTCGCCTGGAGCCCCACATCTTCAAGGATCTGCCCAGGTTATTGCGAATGATTGAGCCGCCATCCATGGAACCTAGTTCCCCAGCTATGGACAATATGCCAAAGGAACAAGCCGAAGGCCTGATAAGCCAACAGGACGAAgtccaaaatattaaaatggaatTTGATAGCCTGGAACAGGCCAGAACTGAGACTGTGGTGAAAAACGAAAGGGAATAA
- Protein Sequence
- MDDVEKILAGLTELLSTIGNESQASTSNALRANQELQNHLEQIRAQILSLLKKIRTRYKRNEEILSKRLSFRNKKTGDGGNSETGAILRGGSFLFKGNLYFRDVHGRSCPNNQDYERRSASEIFPTDFDMRSKHVWTILDKKNLMTGIKKQILDHIAFDKKPKKQKQSIILHETSLASLLSMVDSSFVIDWHQISNLDIQCRHSSTSCRAMWEVYLYPPLRRDDWDQEEDERLLIQAKQNNLQDWATIAAKVGQRSDYQCFVRFHTSLRYCMDPTAIQKWGPKDDGRLKTIVAKHTHNGVINWANVIEHFPDRPKSSLIGRYVYVLHPRISHEPFTEKEDIVLFSAYQEYNGKFSLFPRDLFPNRSLSQLRTRYNNVLAQRTKTDSWSQQDDTNLMEFVREHGTSQWVKCAEFLGNHTRTSCRTRFLVIKRFLEQNPEATVEEFPRRRSNKVACVTQDNWEQRLEELKRNPESINLSPVKSKKRKRLTSETDKPSSYGQTLRGMDYQLYEFFKYAYNLRLRQEVNTSTPAINLPRNHVNLRSVFSALAFEPAKYRSNLIINSLGLSGLLNNYYSRMLENWPAARPDSSQDPQLLPPNYSTIMGFRAICILCAHCHKLGLPSEDRLPYEESHEAVQLFRHRLRALFFRTALLSRLEPHIFKDLPRLLRMIEPPSMEPSSPAMDNMPKEQAEGLISQQDEVQNIKMEFDSLEQARTETVVKNERE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -