Slat007517.1
Basic Information
- Gene Symbol
- ttk_2
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000158.1:670150-672359[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-10 6.5e-07 29.2 0.0 1 44 400 443 400 444 0.91 2 2 2.8 5.7e+03 -2.7 0.9 4 20 551 566 551 566 0.86
Sequence Information
- Coding Sequence
- ATGGGTGGTCCCTCTACGCCGGCGGCGGGAGGAGCTGGTGTGCCCAATATAGAGGGTCAGACCTATTGTCTGCGCTGGAATAATCATCAGACGAATCTGGTGCAGATCCTGCATGCCCTGCACGAGGTGGGCAGCTATGTCGACTGTACCATTGTGGTGGACGATGAGCATTTCAAGGCTCATCGTGTGGTCTTGGCAGCCAATTCGCCTTATTTTCAGACCATCCTGCAGGATGTGCCCCAGGATCATTGCAGCATCATTTTGCCGGGAGTGAAGGCCTTCGAGATTGCAGCCCTGCTGCAGTACATGTACACGGGTGAGACCACAGTGACCAAGAGCCAGGAGCCGGAAATATTACGGACAGCCAAGGAGCTGCAGGTGAAGGGTCTCTACGACAACCTGATGAAGTACAATGACAAGGCGGCCTTGGCTCCGGCTGATGAGCCAGCAGCACATCACCAGTTCCccggcagtggcagtgcccAGGTGGCCACGTCCAGCTCCGCTGGCAAGCCCACTGCCGGACATTTGAATGGCAGCGAAGAGCGGTACAGTCAGCACCACTCGTCCTCAGTGATCTCAACCTCGACTCACATCTCACCCAGTGCGGCCATTTCCAGTAGCTCCTCACCACCGCCACCCTTTGGCTATCAGCCGCCATATACCAATCTCTATCGCAAGTCACCGGGTCCCCTGAATACCCATGCTCATGGTCATGCCCCGGCCGGTGAGGCACCTtacacacccacccacacgGCCCCCCATGTGGCTGCCGGCGATGCTGGTCAGTGGCCCTTGTCGCCCTCGGCTGCTGCCGCGGCCATGTTGAACTCGGTCTATGAATCGGCAGCTGATATGAATCCTCTAAAGCGCAAGAAACTCTCGGCCATTTCCAGCATGTTCATGAATCGCGACACTCCCATTCTGCGCAATGTCTTGGCACAGGCCAATCCGGCCGACTCCTCCCAGCCCAATCCCTTGCTATTGCCTGGCGTCTTCAAGGGTGAGAAATCCTCAGCCGAAAAGACACCCACCCACCAGCACAGCTCcagtggcagcggcaacaATCACAGTTTCAATGGCTCCGACTATGGCGGAGACAAGGAACCTTTGTCTCCACACACAGACCGCTCCTTCGACGACGATAATGGAGCCCAGACTGGCAAGAAGCCGGAGTGGAAACGCTATAAACAGTATACCCGAGCCGATATGATGTGTGCCATCCAGTGTGTGCGCGAGGGCATGAGCGCCCTCCAGGCTAGCCGCAAATTCGGCCTGCCCTCCCGCACCCTCTACGACAAGGTGCGTAAACTGAACATTACCACAGGTCGGGGCACCCACCGGGCCCCCAAGCGTAGTCCGCCCAGTGTGGAGTCCTCGCCCGCCTTTCCCTATGCGgctgcggcagcagctgcccaCAACTACGGCCAGACTGAGCAGCTCCTCTCGGCCATGCAGGAGGAAAGAGAACAGAAGGAGCACTCCAGTGGCCATGGACACCGCAGCGAAGGCAGCTCTAGTCATGGCCATCACAACATGCCGCCCACCATTCCCCATTCGGCGGCCGCCCTGCTCGATCATGCCTTTCTGCAGCAGGCCCTAGAGAATCGTGGTGGCGACATGGCTGGCCGTGAAGCCCTGCATGCCATGGCCCTGGCCGCCGCTGCCCATGCGGCAGCCAATCGCATGTCCACCAGCCCCGGCTCCAATGGCCATGCAGCCCGTTCGCCCAGTCCCGACATGGCTCGTCACTATGCCGAGCCAGAGCTGGAGGGCCGAGAGCAGGAACGCGAGCGCCAGCCGGAAATGGACAAGCATGCTCAGCGCCTTATCAAGCGGGAGGCCATTGACCAGGATGAGCGCGATGCCGACGATGAAGACGATCAGGTGGAGGACTTGTCTCTGGCTCGCAAGCAGCGTGCCACCACGCCACACTCCCATCAGCATCACAAGCGTCCGCGCACGCCATATTCGCCACCCCCACGGGCGGCCTCACCCCTGGAGAGCACCTCCGTCATCCGGCACTCGACCAATGGCAAAGAGATCTCCGAAGACTATGACGAACTGCCGCCAGCCCCGGAGGCAGTGCCTCCGGCTGCCCTCAAGCATGAGCTTCTCGGCGAAGATGCCCGGGCCGACTGA
- Protein Sequence
- MGGPSTPAAGGAGVPNIEGQTYCLRWNNHQTNLVQILHALHEVGSYVDCTIVVDDEHFKAHRVVLAANSPYFQTILQDVPQDHCSIILPGVKAFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKYNDKAALAPADEPAAHHQFPGSGSAQVATSSSAGKPTAGHLNGSEERYSQHHSSSVISTSTHISPSAAISSSSSPPPPFGYQPPYTNLYRKSPGPLNTHAHGHAPAGEAPYTPTHTAPHVAAGDAGQWPLSPSAAAAAMLNSVYESAADMNPLKRKKLSAISSMFMNRDTPILRNVLAQANPADSSQPNPLLLPGVFKGEKSSAEKTPTHQHSSSGSGNNHSFNGSDYGGDKEPLSPHTDRSFDDDNGAQTGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRAPKRSPPSVESSPAFPYAAAAAAAHNYGQTEQLLSAMQEEREQKEHSSGHGHRSEGSSSHGHHNMPPTIPHSAAALLDHAFLQQALENRGGDMAGREALHAMALAAAAHAAANRMSTSPGSNGHAARSPSPDMARHYAEPELEGREQERERQPEMDKHAQRLIKREAIDQDERDADDEDDQVEDLSLARKQRATTPHSHQHHKRPRTPYSPPPRAASPLESTSVIRHSTNGKEISEDYDELPPAPEAVPPAALKHELLGEDARAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01319125;
- 90% Identity
- iTF_01319125;
- 80% Identity
- iTF_01319125;