Slat001795.1
Basic Information
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000100.1:4253653-4273204[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.1e-13 8.4e-10 38.4 0.0 1 44 397 441 397 442 0.92 2 3 2 4.1e+03 -2.2 0.9 5 14 727 736 726 738 0.88 3 3 1e-18 2.2e-15 56.3 0.0 1 43 883 926 883 928 0.95
Sequence Information
- Coding Sequence
- ATGCAGGCTGGCGGAGACATCACGGCAGATAAAAGAGATGCTGGCCAGGCAGCCACTTCGAGTGCTGGCACAACTGTTGAGTGCCAAGCTGGCCCACTAACGACGATTTCTTGCCTGACATTGGACTCCTCTGGATGTGATGGCCTAGAACGCGTCGCTGAAGAATTCATGGGTCGCAGGAAATGGAAACATTATCAGGACCAATTAACGCGCACCCAACTGAATATCGCAGAGCAACAGCCCGTAGCAACAGTCATAGAAGACGAAGACAAGCCACAAAAAGAACCAGAGACACAAATCGAAGAGAATAATCTGAGAAATAATAAGCCAGAAACAGAGAACCACCGTCTAGAAAATAAACAGCCCAAAGATAACGGTCAACCCTTAAACGGCTCATTGAAActtgatttcaaatttgACTCAAAGCATACATCACAAGAAGTAGCAACTGAGAGTGCATCACGTACACCATCACCACCGCCTGAACCCAACGATTGGACACCGCCTGACAAGTGCAATTTCTGTGTTAACGGTCGTTTGCTAACGGTGAACGCCAAAGGTGAATTGGTGGCCGAAACTGTGCCGCCCACCTTGACAACCACCACAGTTACCACCACCgcgagcaacaacaatagcttGAGctatagcaaaaacaacaactacagcttTGGAACTGGAGAAGCCGTGCTTCAACTCGATAGTGACAGCAACTCAAGCGCATCGGTAcacagcaccagcaacaacaataacaagcccAAGCAACGATCACTTGGCAAGGGCAGCATTGCtgcaccacaaccaccaccaccaccaacaacaacaacaacaccaacagcaacagctccTATAGAACTTTTTAAGCTGCTAACAATGACATCCATGGATTCAATGGCCGTACAATTGGCTGCCATAAAGTCCATATCGGATTTACAAACAAatttcaatttgattagcACCCTGGCCAAccatcagcaacaacagcataCTAATTCGGTAACACCAACTACCTCAGAAGTATCTGCCGCCGCAATAAGTCCACAACTCAAAGACACACCCAGTCCCAGTGCAGATGCACCTTTAGATCTTAGCTCGAAACCATCACCAAACTCATCGATTAGCGGTGATCTAAAATCTGTAAGGACAATATCAGAATGTGCCACGCCCATACCATCAGCCAGACGCAGCTACAGCGAAGACGATCTGAACAGTGCACTACAGGATGTCCTAGCCAACAAGCTAGGCACCCGGAAGGCGGCCAGCCAATACAATGTGCCGCGCTCCACACTGCGCAACAAGCTGTACAAACTTACGCTGGAGTCCAAGCCACACGATGGCCCGACACCACTAGAGTTGGCTGATATATTAGAGCGTGACCAAGACGATTCTGGTGACGAGTGCGGCGATGGTGATGACAGTAATGCCTCTACGCCAGTGCCGGCTATCCAGGAGCTTGCCCAGCGCATAGCCGCCACAGCTCAGCTGCGCAAGATGAGCGGCATGTCGGAGAACAATGGCAGCGATGATCTGGGCGAAGATTCAGAGCAACCAGTCTCACCCAAATTGTCGACAGTCCTAAGAGCCCAAAGCACCACCCCCACAGGCAATGTCGCAGCCGTAGGCAGCGGTGGCATGCCCATCGATGGAAACGTGCTACTCCACACCTTAATGCTAGCAGCCGGCATAGGTGTGATGCCCAAGCTGGACGAGACCCAGACACTGGGCGATCTGGTCAAGTCACTGCTGATAGTCAACAGTGGCGGCATCATGAGCGAGGCCATTGCCGCTGCGACCCTCAATGCCAATGCGGCCGCAGCCGCCGACAACACTGTGGCCAATGCCCTACAGAATGGCAATCCCGGATTGCTGGACCAGCATCTGCTGCTGCAACAgttgcaacagcaacaccatcatcatcagcagcaacagttgAATGCAGCCTTTCGACAACGTCTACCAAAGTCTGACACACCGGAGACAACCTCGTCGCTGGACACGAACGAGGCCTGTGATGATCCTATACTGAAGATTCCGTCCTTTAAGGTGAGTGGGGCCAGCAGCAGCTCGCCCTCGTTGCACGGCGGCGGCGGAGGAAGTGGTAGTGTTCACAACAACACCCCCAACTGTACCTCAAATCGCAATGGAGCTGGTGACCAGAGTCCGCACTCGGCCTCACCCATGCTAGCTGCCGCAGTGGCTGCCgtggccaacaacaactaccgTTCGAATAGGAACCTCCTCTCGCCCTCGCCCACCTCCATACAGAAGATGATGGCCAACACCATCCAGCGCAAGATAAACGAGCAGACTAGCCAGGAGGCCTCGGTAGCGGCCGCAGCAGCCAGCATGCTCGGCCTAGCCATGGACCCCAAGCGCAATAATAACGGCAACACCAGTGGCAGCGagtgcagcagcagcggcggagGCCTCGGCAGCGGAGGCAGTAGTTACAAGAAGCCTAGCATCTCGGTGGCCAAAATCATAGGAGGCACAGACACCACCCGCTTCGGGGCCTCACCCAATCTCCTATCTCAGCCGCATCATGCTCACCTGCCCCCACATCACGGCCACCAGCTAAGTGCCGCCGAGGCCGCAGCCCTGGCCGCCGGCAAGGGTACCCGCCCCAAGCGTGGCAAGTACCGGAACTACGATCGCGACAGCCTGGTCGAGGCTGTCAAAGCGGTGCAGCGTGGTGAAATGTCCGTCCACAGGGCGGGCAGCTACTACGGAGTTCCCCACTCAACGCTCGAGTACAAGGTTAAGGAACGGCATCTGATGAGACCCCGCAAACGTGAGCCAAAGCCCCAACCGGATCTAGTGGGCCTCACCGGAGCTGCCAACAAACTGAATCCCAACATTCCAGGGCTCAACCACCTCGATAAGCTGAAGGCTAGCAATAGCTCCAACAGCTCCAAGCTCAGCAATGCCCTCAAAAACAATAACCAGGCctcggcagcagctgccgcgGCGGCTGCCAATGCTCCCAACGGCATGAAGCTGCCTATGTTCGATACAACTGGTCAGTTGCACTACCAGACGAACATGTTCTGGCCGACTCCGGGCCAGCCCAACTATGGTCTGGAATTCAATCGTAGTCCCGAATTTCTCAAGTCCCAGCTGGCCCGTCTAAACGTAGGCGCCGGCAGTACCGGAGGCAGCAGTCAACTGGGCGCCTCGCCAAACCATCACGGAGTGCCACAGATGAAGAATGCCCTCGAGTTTGCTGAGAATATGTATGACGGTATCATTCGGAAGACCCTCAAGAGCAGTGATGCCATCTCGGGAGCTGGCAGTGGGAgtggtggcaatggcaatgcccTTCTGGACCAGCTGCTGGTGAAGAAGACACCCTTCACCAATAATTGCACCAATGAATATGCAGCCTCTTGCTCCACAGCGGATTTGAtggctggcagtggcagtgtcaGTGGTCTCAGTGGAGTCAAGCGTACGGGTAGTCCACTCTCCGCCTATGCAGACATCAAACGCGAGCGCTTCAGTCCTGGGCGGAGTGGTGACAGTGCCAGCAGCGATGAGGAACACCAGCATGTCagcaggaacaacaacaacaacaatagcgaGATGGcgcacaacaaaaataaaagcaatagcaacaaatgcaacaacaacggcagcagcaacaacaacaacaacggccgCAGTCGCATGACATCAAGGGATTCGGAAACGGATGCCAGCAGTCTGAAGAGCGAGCACTCGCTCAGTAACCCAGCTCACCTgcttgccaacaacaataaactaaACGATCTCAATGGCAGCCTCAAACTGGAGGCACATGATCAGCCGCCCCACGAATCCGACACGCAGCCCACCTCCTCAATACTGCACGAAAAGCTGGCCCAAATCAAGGCCGAGCAGGTCGATTGCACCCCAGCCGAGCAATTATAG
- Protein Sequence
- MQAGGDITADKRDAGQAATSSAGTTVECQAGPLTTISCLTLDSSGCDGLERVAEEFMGRRKWKHYQDQLTRTQLNIAEQQPVATVIEDEDKPQKEPETQIEENNLRNNKPETENHRLENKQPKDNGQPLNGSLKLDFKFDSKHTSQEVATESASRTPSPPPEPNDWTPPDKCNFCVNGRLLTVNAKGELVAETVPPTLTTTTVTTTASNNNSLSYSKNNNYSFGTGEAVLQLDSDSNSSASVHSTSNNNNKPKQRSLGKGSIAAPQPPPPPTTTTTPTATAPIELFKLLTMTSMDSMAVQLAAIKSISDLQTNFNLISTLANHQQQQHTNSVTPTTSEVSAAAISPQLKDTPSPSADAPLDLSSKPSPNSSISGDLKSVRTISECATPIPSARRSYSEDDLNSALQDVLANKLGTRKAASQYNVPRSTLRNKLYKLTLESKPHDGPTPLELADILERDQDDSGDECGDGDDSNASTPVPAIQELAQRIAATAQLRKMSGMSENNGSDDLGEDSEQPVSPKLSTVLRAQSTTPTGNVAAVGSGGMPIDGNVLLHTLMLAAGIGVMPKLDETQTLGDLVKSLLIVNSGGIMSEAIAAATLNANAAAAADNTVANALQNGNPGLLDQHLLLQQLQQQHHHHQQQQLNAAFRQRLPKSDTPETTSSLDTNEACDDPILKIPSFKVSGASSSSPSLHGGGGGSGSVHNNTPNCTSNRNGAGDQSPHSASPMLAAAVAAVANNNYRSNRNLLSPSPTSIQKMMANTIQRKINEQTSQEASVAAAAASMLGLAMDPKRNNNGNTSGSECSSSGGGLGSGGSSYKKPSISVAKIIGGTDTTRFGASPNLLSQPHHAHLPPHHGHQLSAAEAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKLNPNIPGLNHLDKLKASNSSNSSKLSNALKNNNQASAAAAAAAANAPNGMKLPMFDTTGQLHYQTNMFWPTPGQPNYGLEFNRSPEFLKSQLARLNVGAGSTGGSSQLGASPNHHGVPQMKNALEFAENMYDGIIRKTLKSSDAISGAGSGSGGNGNALLDQLLVKKTPFTNNCTNEYAASCSTADLMAGSGSVSGLSGVKRTGSPLSAYADIKRERFSPGRSGDSASSDEEHQHVSRNNNNNNSEMAHNKNKSNSNKCNNNGSSNNNNNGRSRMTSRDSETDASSLKSEHSLSNPAHLLANNNKLNDLNGSLKLEAHDQPPHESDTQPTSSILHEKLAQIKAEQVDCTPAEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -