Slat015614.2
Basic Information
- Gene Symbol
- kn
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000533.1:1984483-1986479[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-119 1.1e-115 387.3 0.0 205 384 1 209 1 212 0.99 2 2 2.3e-07 0.00094 17.8 15.3 421 520 213 312 208 328 0.65
Sequence Information
- Coding Sequence
- ATGCGCCGATTTCAGGTGGTCATTTCCACCCAAGTGGCCGTCGACGGACCTTTGCTAGCCATTTCGGATAACATGTTTGTGCACAACAATTCGAAGCATGGACGCCGCGCTAAACGCTTGGACACCACGGAAGGTACAGGCACTAACTCCCTGTCCTTATCCGGTCACCCCCTTGCGCCCGACAGTACCTATGATGGACTCTATCCACCGTTACCGGTGGCCACTCCCTGCATCAAGGCTATATCACCTAGCGAAGGCTGGACCACAGGCGGGGCCACAGTAATTATTGTAGGTGACAACTTCTTCGACGGACTCCAGGTAGTTTTCGGCACAATGCTGGTCTGGAGTGAGTTGATCACATCACATGCAATCCGCGTGCAAACACCACCACGCCACATACCCGGCGTGGTCGAGGTCACGCTATCCTACAAAAGTAAACAGTTCTGCAAAGGATCCCCCGGGCgctttgtttatgtttCAGCCCTCAATGAGCCTACAATCGACTATGGTTTCCAGCGGCTTCAGAAACTGATTCCCAGGCACCCCGGCGATCCAGAGAAACTGCAAAAGGAAATTATCTTAAAACGGGCAGCCGATCTGGTGGAAGCACTCTACTCCATGCCCAGCAGATCGCCCGGTGGGTCCACAGGCTTCAATTCCTATGCCGGTCAACTGGCGGTGAGTGTCCAAGACGGCTCTGGTCAGTGGGCAGAAGACGATTATCAACGGGCACAATCAAGCAGTGTTAGTCCGCGTGGTGGATACTGCAGTAGCGCCTCCACACCGCACAGCTCGGGCGGCTCATATGGGCCCACGGCGGCTACtgcggcagtggcagccacTGCCAACGGCTATGCACCCACAGCCAACATGGGCACACTGTCCTCTTCACCGAGCAGTGTCTTTAACTCCACATCAATGTCCGTATCTTCAACGTGGCATCAGGCACTGGTTCAACACCACCATGCGACGGCAGTCCATCCCCACCATTACCCGCATCCTCACCAGCCCTGGCACAATCCGGCCGGCTCAGCAGCCACGGCAGCAGCCGTTTGA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGTNSLSLSGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTGFNSYAGQLAVSVQDGSGQWAEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGPTAATAAVAATANGYAPTANMGTLSSSPSSVFNSTSMSVSSTWHQALVQHHHATAVHPHHYPHPHQPWHNPAGSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00615327;
- 90% Identity
- iTF_00510322;
- 80% Identity
- -