Slat012000.1
Basic Information
- Gene Symbol
- grh_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000388.1:3618375-3660521[-]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.017 1.7e+02 1.5 2.2 74 116 613 654 580 683 0.62 2 2 3.4e-63 3.5e-59 200.0 0.5 24 221 1092 1284 1078 1286 0.94
Sequence Information
- Coding Sequence
- ATGTCCACATCAACCGCCACAACGAGCGTCATAACGTCCAACGAACTCTCGCTGTCTGCCCACGCCCACAACCACGCCCTCCACGTACATCCCCGAGTGGGTCAACTGAACGACGCCTCACTGTCGCCCATCCAGCAAGGCGGTGCCAATATAGTGACCACCAGCAACACATCTCCCCTGGCAGCCAACGGGGTGCCGCTGCTCACAATGCATCGCTCACCAGACAGTCCACAGCCCGAGCTGGCCACCATGACCAATGTAAATGTCCTGGACTTGCACACAGACTCCTCCAAGCTATACGACAAGGAGGCCGTCTTCATCTACGAGACACCCAAGGTTGTGATGTCCACCGTCGATGGAGGCGGCGGTGGTCCCAACGGACCGGACGACCACGTCATAGACGCCCGGATCGCAGCCCAGCTGAGCACACAACATCCCGGCCTGGCGCCGCCACCTCCACCGCCCGAAAACCAGCCACTGGCCAAGATCGAATTCGACGAGAATCAAATCATACGAGTGGTGGGTCCCAACGGGGAGCAGCAGCAGATCATCTCGCGCGACATCATCAATGGAGAGCAGCACATACTCTCCCGCAACGAGGCTGGCGAACACATACTCACACGCATTGTCAGCGATCCCTCCAAGCTGATGCCCAACGACAATGCCGTGGCCACCGCCATGTACAATCAAGCCCAGAAGCTGAACAATGATCACCAGGCGGTGTATCAGACCTCCCCGCTGGATGCTTCCGTCCTGCACTATAGCACCGACAATGTGATCAAGACTGAGGCGGATATCTACGAGGACCACAAGAAGCATGCCGCTGGTTCGATCATCTACACCACCTCAGATCCGAATGGCGTGGATGTCAAACAGCTACCCCATTTGGCAGTGCCACAGAAGCTCGATCCAGACCTCTACCAGCAGGACAAGCACATTGATTTGATCTATAATGACGGCAGCAAAACTGTAATATACTCGACAACCGACCAAAAGGGTCTTGAGATCTATTCGGGCAGTGATATTGGCAGCTTGGTGTCGGATGGCCAGGTGGTGGTCCAGGCAGGCCTTCCCTATGCCACGGGCACAAGTGGCGCAGGTCAGCCTGTCTATATTGTGTCCGATGCCCTGCCCACAGATGTAGAGGAACACCTACAAGgACGTGGCGCCAATGCTTATGCCACAGAGGCCGACTCACCGCCGGCTCAGCATTTGCCACacccaccgccgccaccacaaCCAGCACAACCGTCGTCATTGCCACCGCCGCCCACTCATCATTATGCCAGGCAATCGCCACCGCATTACTATGAGCCACACAAGGATgagcaacaccaacaccaacagctGGAGCCCCTGACTGCCGCAGGTCTGATGCAGGCCGTGGCCGATGAGATACATTTGAGCGAACAGCAGCCAACGCCACCGCATAACCATGACTTGCACCAACACCATCAgccacaccaccaccaccaacaccaccaccagccaCACGAGCATCAGCATCATCTCAGTCAGATGATAGAGCAGCCTCTGGGCATGCCGGGCGAGAGTGTGGCGGCCGGCTCATATGCCGTTTACAGCTACTACAAAGACACCGATGTGGCCGACTTGGAGGCCGAGAaggagaacaacaacaacagcaccagcagGAGTCGCGGCGATGGCGGTGGCGGTATCGGTGGCCAGGATGATGCCGATCTGGTCTGGAGcACCGCCATCAGCGCCAGCAAGCTGAATGGCCAGACCACACCTATCGATGTCTCTGGCCTAtcgcaaaatgaaattcaaggCTTTCTACTTGGTTCACACCCATCATCatcggcggcagcagcggccacAACGCAAGTTGTCTCCACGACAACAATTtcgcatcagcagcagcagcaacaacaacaacaacaacagcagcagcagcaacaccagcagcagcaacaacaacagcaacatgcCACAGCCATTGTGACGGGGAGTGTGGGCACAATTGTGACGACAGcaacgcagcagcagcaacaacaacaacaactaattaGCATCAAACGAGAGCCCGAAGACTTGCGCAAGGATCCGAAAAATGGCAATATCGGAGCGGCCAACGGTTCGGTCATAACGCAAAAGATTTTGACTGTGAATGCAGCAGAGCCACCAGcacaaccacaaccaccaccaccaccatcatcattgtcattgtcatcaTCGTTACCATATAGGACTGGAGTGGACCGAGTAGCTTTAGAATTTTGTTCCgataaccacaacaacaacaacagcagcaacaacgagAAAAGTCACACTGAAAGCCCCGAAAGAGAATTAGCGATGTATGCGACCACCGGCGGCACACAGATCTATCTACAGGTGAGTGAGTCTGCTAGACTGGAGatcgagcaacaacaactccaacaacaacaacaacagcaacaattgcaactacaacaacaacaaacaccaCCACCCTCCAACCAGCAGAGCTCACATTCCATACCGACGAGCAGTGCCACTGGCGGCGGAGGAGGAAGCGGAGGTGGCGGTGGACCCCAACAGACACTCCAACAGGCACAGAGTCCCAGCCCGGGTCCATATATCACACCGGATAGCTATGGCATGTACACAACCAGTCGCCTGCCGCCGGGTCCCCCGCCTACGACCACCTTCATAACCGAACCCTATTACCGGGAATACTTTGCTTCCGATGGTCAGGGTGGCTATGTGCCCACCACACGCAGCCTCTACGGCGACGATGTGGGCACAGGCCAGGCCGGCGGTGGCGGAGGTGGTATCACATATGAGGCACGCTTCACTAGTGCGGCACCCACAGTCTTGACCAGCAGCGGCCTCTCCCAGACCAGTCATCAGTCCGCCCTTTCAGGACCGCCtccaaaccaacaacaacaacagcagcaacagcaacaacacacgAATGGCAAAAACGGTGGCACTCCGCTGTATACGAAGGCCATAACGGCAGCCGGTCTCACAGTGGACCTGCCCAGTCCGGACTCGGGCATTGGCACAGACGCCATCACACCGCGGGATCAGACCAACATTCAACAGTCCTTCGACTATACGGAACTCTGTCAGCCGGGCACTCTGATCGATGCCAATGGCACCATACCCGTCTCGGTCAATAATATCCAACGCACTGTGGTTCACGGTAGTCAGAATAGTCCCACCACCTCACTGGTGGACACCAGCACAAATGGCTCCACACGATCGAGGCCCTGGCATGACTTTGGTCGACAAAACGATGCcgacaaaatacaaataccaaaaaccttcacAAATGTGGGCTTCCGCTACCATTTGGAGAGCCCCATCAGCTCATCGCAACGGCGCGAAGACGATCGCATCACCTACATCAACAAAGGGCAGTTCTATGGCATAACGCTGGAGTATGTGCATGATGCGGataagccaattaaaaatacaacagTTAAGagtGTGATTATGTTAATGTTTCGTGAGGAAAAGAGTCCCGAAGATGAGATAAAGGCCTGGCAATTCTGGCACAGTCGTCAGCATTCCGTAAAGCAAAGAATCTTGGATGCAGatacaaAGAACTCGGTTGGCCTTGTTGGCTGCATTGAGGAAGTCTCACATAATGCCATTGCCGTTTATTGGAATCCATTGGAGAGCTCGGCCAAGATCAACATTGCCGTACAGTGTCTCAGCACGGATTTCAGCAGTCAAAAAGGTGTTAAGGGTCTGCCGCTGCATGTACAAATTGATACATTCGAGGATCCCAGAGATGCCACAGTTTTTCATCGTGGCTATTGTCAGATAAAAGTTTTCTGCGATAAGGGCGCCGAGCGCAAGACCCGCGATGAGGAGAGACGCGCGGCCAAACGAAAGATGACTGCCACAGGACGGAAGAAATTGGATGAGCTTTATCATCCTGTAACAGATCGTTCCGAGTTCTATGGCATGCAGGATCTTGCCAAGCCACCGGTGCTCTTTTCACCCGCCGAAGATATGGAAAAGAGCTTCTATGGCCATGAGACTGACTCGCCCGATTTGAAGGGAGCTTCGCCGTTTCTGCTACATGGCCAGAAGGTGGCCACACCAACGCTCAAATTCCATAATCATTTTCCGCCCGACATGCAGACTGATAAAAAAGATCACATGTTGGATTCCACAATGCTGGCCTCTGCCCCGATGACCGACTTTGGTCCGCCCATGAAGCGGGGACGCATGACCCCGCCCACCACGGAGAGGGTGATGCTCTATGTGAGGCAAGAGAATGAGGAGGTCTACACCCCGCTGCATGTGGTGCCGCCCACCACAATTGGATTGCTGAATGCGattgaaaacaaatacaaaatctcAACAACGAGCATAAATAACATTTATCGCACAAATAAGAAAGGgaTTACGGCGAAAATTGATGATGATATGATTTCATATTATTGCAATGaagatattttcttattgGAAGTGCAACAGATCGAGGACGATCTGTATGATGTCACGCTTACGGAGCTGCCcaatcaataa
- Protein Sequence
- MSTSTATTSVITSNELSLSAHAHNHALHVHPRVGQLNDASLSPIQQGGANIVTTSNTSPLAANGVPLLTMHRSPDSPQPELATMTNVNVLDLHTDSSKLYDKEAVFIYETPKVVMSTVDGGGGGPNGPDDHVIDARIAAQLSTQHPGLAPPPPPPENQPLAKIEFDENQIIRVVGPNGEQQQIISRDIINGEQHILSRNEAGEHILTRIVSDPSKLMPNDNAVATAMYNQAQKLNNDHQAVYQTSPLDASVLHYSTDNVIKTEADIYEDHKKHAAGSIIYTTSDPNGVDVKQLPHLAVPQKLDPDLYQQDKHIDLIYNDGSKTVIYSTTDQKGLEIYSGSDIGSLVSDGQVVVQAGLPYATGTSGAGQPVYIVSDALPTDVEEHLQGRGANAYATEADSPPAQHLPHPPPPPQPAQPSSLPPPPTHHYARQSPPHYYEPHKDEQHQHQQLEPLTAAGLMQAVADEIHLSEQQPTPPHNHDLHQHHQPHHHHQHHHQPHEHQHHLSQMIEQPLGMPGESVAAGSYAVYSYYKDTDVADLEAEKENNNNSTSRSRGDGGGGIGGQDDADLVWSTAISASKLNGQTTPIDVSGLSQNEIQGFLLGSHPSSSAAAAATTQVVSTTTISHQQQQQQQQQQQQQQQHQQQQQQQQHATAIVTGSVGTIVTTATQQQQQQQQLISIKREPEDLRKDPKNGNIGAANGSVITQKILTVNAAEPPAQPQPPPPPSSLSLSSSLPYRTGVDRVALEFCSDNHNNNNSSNNEKSHTESPERELAMYATTGGTQIYLQVSESARLEIEQQQLQQQQQQQQLQLQQQQTPPPSNQQSSHSIPTSSATGGGGGSGGGGGPQQTLQQAQSPSPGPYITPDSYGMYTTSRLPPGPPPTTTFITEPYYREYFASDGQGGYVPTTRSLYGDDVGTGQAGGGGGGITYEARFTSAAPTVLTSSGLSQTSHQSALSGPPPNQQQQQQQQQQHTNGKNGGTPLYTKAITAAGLTVDLPSPDSGIGTDAITPRDQTNIQQSFDYTELCQPGTLIDANGTIPVSVNNIQRTVVHGSQNSPTTSLVDTSTNGSTRSRPWHDFGRQNDADKIQIPKTFTNVGFRYHLESPISSSQRREDDRITYINKGQFYGITLEYVHDADKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDATVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYGMQDLAKPPVLFSPAEDMEKSFYGHETDSPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHMLDSTMLASAPMTDFGPPMKRGRMTPPTTERVMLYVRQENEEVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQIEDDLYDVTLTELPNQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -