Slat003866.1
Basic Information
- Gene Symbol
- cnc_1
- Assembly
- GCA_037075145.1
- Location
- JBAMCM010000100.1:23215334-23227954[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9 1.1e+04 -3.3 0.1 29 45 20 39 19 56 0.76 2 2 3e-18 3.2e-15 56.1 4.3 3 63 706 766 704 768 0.95
Sequence Information
- Coding Sequence
- atgaaaattaatttcggtCGTGTAACCAATCGTGAATATATCCGTCTACCTTTGGATGAGTTGCTCAACGACGTCTTGCAACTAACCTCGGAATTCCCTTTGGACGAAGAATTGCATAACGATTCGGGTGCGTCGACTTCTCAGGCAGCTGCCGCTTTGAAGAACAAGAATAACGAACAAAATACTTCAAACACTTTTGTCTCGGAAACCGGTGAAGATATACTCCTCAACGAAGTGATCAATTCCACCAGCAACGCGGATACGAAAAGCGAGACCAACTCGAGCGACGGCAAAAAGGATAACGATAGCTTCTCCGTGTCGGATTTCGACGAGCTGCAATTTGATTTAGATGACGACGCCAAAAAGGAATTAGACGAAATGTTGCAATCAACGGCTCCACCCTATCACCATGCCCACCATccccaccatcatcatcatcatgccCATCATGCGgcagccgctgccgccgcccatcatcatcaccagcgAGCCGTGCAGGCAGCCGGAGCACCCAACTATGCCAGCGTGGGCAGTGGACCCAATAGCGCCTTCCATCGCCAGTCGGCCACCAGTGGCTTCCACCATGGACACCATCAgAGTCGTATGCCTCCATTGAATCGTGGTGTTTCCATGGATATAGCCTCGTTCTTTTCACCGATTCCGGATATGGCATATCCGCATTATCCCAGCTATTCGTATCAGGGCCCCGGAGCTGGCATGCCACCCAGCCAGCAATATGGACATGCTGCGgctccaccaccaccgccgccaccacatCATGGCCATCATGCGGCGGCCATGTTGCATGCCAATTCGGCCCTGGGCGATATCTGTTCGGCCGCTGGCGGTCAACCACATTATGGCCACAATCTCGGCTCGGCCGTCTCCTCCAGCATGCATTTGACCAACTCCAGCCACGACTCCGATGGAGCCGCCTCGGCCAATGCCACCAATCACTATAAAATGGAACAGGACCTTATGTACTATAATaatgCCCCTTCGGATATGAATCATAATTCGGATGGttttatcaattcaattttgaacgATGAAGATATGCAGTTAATGGAAATGAATGagaGTTTCTGTCGCATGGTGGacaacagcaccagcaacaactCATCACTACTCGGGCTGCCCAGCAGCGGACATGCTAGCAATTCTGGCAGCACAGTTGGTGGTGCCATTCTCCCAGGCGGCAGCATTGGACATGCCACAGTCGGCTCTGGTGTGGGCGTAGGTCTCTCAATGAGTGGAGCAACAGGTGGCTCTGCGGCGGGCATGACTGCCGATCTATTGGCCAGTGGTGGCGGTGCTCAGACAGGTGCCGATCGACTGGACGCTTCCAGTGACAGTGCCGTCAGCTCAATGGGCTCCGAACGTGTTCCCTCCCTATCGGACGGCGAGTGGGGTGAGGGCAGTGACTCCGCCCAGGACTATCATCGCAGCAAATATGTGGGTCCCTTTGACTACAGCTACAACAATACCACACGCATCAGTGCGGCCACTCGTCAGCCCCCAGTGGCCCAGAAGAAACATCAATTGTATGGCAAGCGGGATCCCCACAAGCAGACGCCCAGTGCCCTGCCGCCCACAGGGCCGGCTCCTGGGGTCACAGCTCCGCTCTCGGCCAATGTGCCCAGCGCTGTGCAATGCCAGGCGGTACAGCCCCAGTCTATCAAATATGAGTATGATGCCGGCTATGGTGGCATGAATGGGGCTGCGGCTCTCCAGCATAATGGCAACGAGGCTGGAGCTATGGCACCGGCTCTGTCCAAGGATTACCAGGCCGAGCCTTTCGGTATGGGCGGGGCCAGCAGTCCCTATTCCGTGCGTCCCCCACGTCCGCCACGCACTGCTCTGGAGATTGCCCAGCACAATCACACTTACTCCCAGCCCCAGGGAACTGGTTCGCTACCCAGACCCCAGGCTCGCGACAAGAAGCATAGCAGCAGCTCGGCCAGTCTGTCCGAGGAAGAGCATTTGTCGCGTGACGAGAAGCGGGCACGTAGCCTGAATATACCGATTCCAGTGAACGACATCATCAACTTGCCCATGGATGAGTTCAACGAGCGCCTCTCCAAATACGATTTGAGCGAGAATCAATTGTCTCTGATTCGGGACATACGTCGCCGTGGCAAGAACAAGGTGGCCGCACAGAATTGTCGCAAACGCAAACTGGATCAGATACTCACGCTGGAGGATGAGGTGAATGCTGTGGTCAAACGCAAGGCCCAGCTCAATCAAGAGCATGACAATCTGACTGCCGAAGTCAAGCGTATTTCCAACAAATTCTCCATGCTGCATCGTCATGTTTTCTCGTATCTGCGTGATCCCGAGGGTAATCCTTGCTCGCCAACCGACTACAGCTTGCAGCAGGCAGCCGATGGTTCTGTATTTCTCTTGCCGCGCGACAAACCCGACAACAATACGGGATCCTCGGCCAATGTGGGTCTGAATGGTCTGGGCCACAATGGAGTCGTGCACAGCCACCTGGCTGCAAATCCACATCATGTGTCCGGTCtgtcacagcagcagcaacagcagcagcagacacGTCTGCCAACCCATCATGCTCAACTCCAGCAAAACCATCtccatcatcagcagcagtcgcagcagcaacaacaacaacagtcgcagcaacaacaacaacaacagtcacaCTCTCATCATGGCACGCAGCACAAGGAATGA
- Protein Sequence
- MKINFGRVTNREYIRLPLDELLNDVLQLTSEFPLDEELHNDSGASTSQAAAALKNKNNEQNTSNTFVSETGEDILLNEVINSTSNADTKSETNSSDGKKDNDSFSVSDFDELQFDLDDDAKKELDEMLQSTAPPYHHAHHPHHHHHHAHHAAAAAAAHHHHQRAVQAAGAPNYASVGSGPNSAFHRQSATSGFHHGHHQSRMPPLNRGVSMDIASFFSPIPDMAYPHYPSYSYQGPGAGMPPSQQYGHAAAPPPPPPPHHGHHAAAMLHANSALGDICSAAGGQPHYGHNLGSAVSSSMHLTNSSHDSDGAASANATNHYKMEQDLMYYNNAPSDMNHNSDGFINSILNDEDMQLMEMNESFCRMVDNSTSNNSSLLGLPSSGHASNSGSTVGGAILPGGSIGHATVGSGVGVGLSMSGATGGSAAGMTADLLASGGGAQTGADRLDASSDSAVSSMGSERVPSLSDGEWGEGSDSAQDYHRSKYVGPFDYSYNNTTRISAATRQPPVAQKKHQLYGKRDPHKQTPSALPPTGPAPGVTAPLSANVPSAVQCQAVQPQSIKYEYDAGYGGMNGAAALQHNGNEAGAMAPALSKDYQAEPFGMGGASSPYSVRPPRPPRTALEIAQHNHTYSQPQGTGSLPRPQARDKKHSSSSASLSEEEHLSRDEKRARSLNIPIPVNDIINLPMDEFNERLSKYDLSENQLSLIRDIRRRGKNKVAAQNCRKRKLDQILTLEDEVNAVVKRKAQLNQEHDNLTAEVKRISNKFSMLHRHVFSYLRDPEGNPCSPTDYSLQQAADGSVFLLPRDKPDNNTGSSANVGLNGLGHNGVVHSHLAANPHHVSGLSQQQQQQQQTRLPTHHAQLQQNHLHHQQQSQQQQQQQSQQQQQQQSHSHHGTQHKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -