Basic Information

Insect: Scaeva pyrastri
Gene Symbol: ush
Assembly: GCA_905146935.1
Location: LR989928.1:67440752-67445365[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.015 1.9 9.9 0.0 1 20 297 316 297 318 0.90

2 9 0.00029 0.038 15.3 0.8 1 23 371 393 371 393 0.98

3 9 0.031 4 8.9 1.0 2 21 418 437 418 438 0.92

4 9 0.051 6.6 8.2 2.9 2 21 808 827 807 828 0.93

5 9 0.021 2.7 9.4 0.1 3 21 866 884 864 885 0.92

6 9 0.25 32 6.1 0.1 1 23 930 952 930 952 0.91

7 9 0.015 1.9 9.9 1.3 1 23 958 980 958 980 0.99

8 9 0.00042 0.054 14.8 0.8 1 23 1066 1089 1066 1089 0.96

9 9 0.32 42 5.7 0.8 2 20 1230 1248 1229 1250 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.015	1.9	9.9	0.0	1	20	297	316	297	318	0.90
2	9	0.00029	0.038	15.3	0.8	1	23	371	393	371	393	0.98
3	9	0.031	4	8.9	1.0	2	21	418	437	418	438	0.92
4	9	0.051	6.6	8.2	2.9	2	21	808	827	807	828	0.93
5	9	0.021	2.7	9.4	0.1	3	21	866	884	864	885	0.92
6	9	0.25	32	6.1	0.1	1	23	930	952	930	952	0.91
7	9	0.015	1.9	9.9	1.3	1	23	958	980	958	980	0.99
8	9	0.00042	0.054	14.8	0.8	1	23	1066	1089	1066	1089	0.96
9	9	0.32	42	5.7	0.8	2	20	1230	1248	1229	1250	0.92

Sequence Information

Coding Sequence: ATGTTCATTTATTGGACACAGCATAAAACTCTGTGTCCCAGGAATAAAAACGAATTGGAAATTCTCTTATTAAAATTATCATTTCTTGAAATCGGAAGATTATCAAATTCCTTGGAAGTCCACGTTCCAGAGAGGTATGTTGCAATCTGCGTTATAAAACCAGTGTCGTATTCCTCTCCGCAAGCATCACCATCATCGCCATCATCATCATCAGCACCGAAGAGTGTGCCTTCTTTGGTTGCTGTTGCTGGAACGGAACTTATCCCACCATCATCATGGTTTTTGTCATTTCGAATTCGAATCCACTATGAATACCATTCTTGTTTAATTGCCCAGAGTAGAATTTCCCAATTAAACTCACACGCTCTTTTTTGCATATTTTCAGAAACAAAAGATCTAAGCCCAAGCGATTTGAATGACCAAAGTGATCCGGTTGCTTCGGCTGACATTGATCAATCAGCTGAACCAATAACAGCAACAACAACAACAACAGAATCCCTAATGGAGGAAGAAAACTGTCCGGCTTCGGGTTCACCTAGAACTGGAACCCTTTCGCCGCCCTCCGAACCAGAAGTCGATGAACGAAATTCTCCTTCAGTTCAGTCTGATCTGCCATCGGAAGTGAATTCACCTTCAGAGCCAGACGACTCGTCATCAATAGTTCCTGCTGTCGCGGTAACTGCGATTCCTAAACTACGACTGAATGCACTACTAGCTTCTGATCCTGCTCTCAATCCAGATGCGAGAAATCTGAAGATACTTCATGAGGAATCAACAAAGAATCATCATCAGTTGGAGCAGGAAACACTGCCTGCACCTGTTGATCAGAAGCCTTCTGTTAAGAGCCAAATTCCAGCGGTTGTGGATAATTCACAGCGAGTGAAAGTTTTTATGTGTCTTCCCTGTGGAATTGGATTCTCGTCGAGATCGACTCTGGAAGCGCATCAAGCTTACTACTGTTCGCACAGAAAAGAAGCTGAAGAAGATACGACCGTTGGTGGTGGGGGTGGTGGAAGTGGTGCTGGCCTTGGAAATTCATCGTCGGGAGATAAGTCCACCATCACATCCAGCGGTGAGCCATCAGCGAAATCTATTAAGACTGGCAAGCAGTACGCTTGCACACAGTGCTCCTATAGTGCCGATAAGAAAGTCTCATTAAATCGTCACATGCGAATGCACCAAAGCTCTCCGGCGCCAAGTTCTAACGCCTCCAATGGTGGCGATGATAGTTCTAGTCAACAAGTCGATCGTTACTGCTCCGAATGTGATATTAGATTCTCGAATGTTAAAACGTATCGTGCCCATAAGCAACACTATTGTAGTTCCAGGCGAAATGATGGCCAAACAACTCCAAAACTAGCAGAACCAATTGTTAAAACTAGTGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCACAAATCCCATTCTCATAATTCCATATTATTTAATTCGAGCTGCCAGTATGATTCCAGGCCCATTAACTTCAGTCTCACCTGGAATTCCAAATCCTGAAAGCACATGTTTCTCACTCGAAAATGGATCTCTCAAACCAATGGCTACTGCCCTAAGTACTAGCAGCATTACAAATAACCAAATTCCACATGTGGATGCAACGCCACGAACACATCCTCCACCATTACCAAGTACTCCATCGATCCCAGACGCAAGTGCTGTACCTCCACTATTGACCGAAAAGAATACACGTGCATCATCTGCCAACAGTAGCAGTGATTCGGTAAAACAAATCAAGAAAGACGTGCCCATACGAGATTTTGCTCCTCTTGACCTGTCTCTGAGACGGTCTCCCATCCAAAGAGCCCATCGTGTTCGTTCGTCATCGAGTTTTATGGCACCAATTGACGATAGAATTGACATTGAAACCATGATGGAAGGCAAGGAGAATTTATCGATTGACAGTGGCAGTATAACGCCCGAACAAATAGTCTGCGCTCCCTCTCTACCCAATAGCCCTTCCATGAGTCCCTCGCCTAAGAGGCGAGCCCTCAGTCCCAGGAGTAGCAGTGCCGCTTCAATATCACCAGTTCCACCATCGGTGATGGATCATTTGCCCTTGAGATCAATGCTTTCCGCTGACATCGCCATGAAACTAACTGAATCCAATATAATTCCTCCACTAATTGCGAAACAGAACTTAGAACTCGCCTTTAAGCTGTCAACTGCTTCGGCTGCTGCAGCAGCTGCGGCATCAGCTTCAAGCAAACAAAACGACTCCCCCAAGGCATCAACGCTCTTAGGACACCCTGGAACTCCGATCAGTGTCGGAACAGCAACTGGTGGACAGCCACAGATTTTCGTTAAACAAGGTGTTTCCAAGTGCAAAGAGTGCAACATAGTTTTCTGCAAATACGAGAACTACTTGGCCCACAAGCAACATTACTGCTCGGCTAGGAACCAAGAAGACACCGAAAGCAAGACCAGTACTCCTCCATCGGGATCCAGTACTGGCGGAATAGATACTAATCCCATTGCATATCAGCAGCTGATTTGTGCGGCTTGTGGTATCAAATACACATCCATGGATAATTTGAGGGCCCATCAGAAATTCTATTGTCCCAAAGGCGGTGGTGACGCAGCATCTGCGCCCATCACCAAGGAAAAATGTTCCAAGTGCAAGGTTCTACACGAAATTGGACAGCCATGTCCACCAACAGCGGCTACAGCTCAGCCACAGTGTTCCTACAAATGTCCTGTGTGTGATGTTGTGAGTTTAACTGCCTCCGAAAGTCGCAAACATCTGGAAACCCATGGCAGTGTCAAGGCTTTTCGCTGTTCAATTTGTCGGTATAAGGGCAACACTTTACGTGGCATGAGAACCCATATTCGGATGCATTTCGACAAGAAAACGTCAGACTTTAACGAGGAGAATTACATGTCATGCATATTAGAGGATGATGGCTTAGAAATTCCTAGTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTCAACTGTGAAATGTGTAACTACTCATCTTCCTACAAAGGCAATGTGATGCGTCATATGAAACTGGTACACTCGCAGCCTGGTACTTCACCATCGATTTCTCCCGAAGTGGTCATCGAAGAAAATGAACCATCATCAGCAATTCAAACCCTCAACGGAGACAACAACGGCAGCAGCCTTCCTGGGGGTTTCACCATAAAGACAGAACCCTTAGAGCCTATCGTCGTAGCTTCTGCCATCAAGAACAATAACTCAAATTCCAATTCCATTGCAAATCATCACCCGCATGCTCTTCATCATTTAGAACCGCTGGCTCAGGTCAAATCAGAACCAATGGATACTGATATTGGGGTTATAAGATCTCTACACTCACCACTCTCAATTCCTCCACCGCCACTTCTAAATTCAACATCTCCACTATCGGCTGATGAAAATTCCCTTCTAAGAAACAGTTCGTCATCTGGACCCGGTGGAATGCCACTAAATCAAAAATATTGTCAAACATGCGATATAAGTTTTAATTATACGAAAACCTATTTGGCACATAAGCAATTTTATTGCAAGAATAAACCAAGAGCTGATACAGATAGTCCGAGTCCAGTGACGCCAGTGCAATCTCCAACTATGTTGACTAAGAATAAAGAGAATTTGGAAGCTGCGATGTTATAG
Protein Sequence: MFIYWTQHKTLCPRNKNELEILLLKLSFLEIGRLSNSLEVHVPERYVAICVIKPVSYSSPQASPSSPSSSSAPKSVPSLVAVAGTELIPPSSWFLSFRIRIHYEYHSCLIAQSRISQLNSHALFCIFSETKDLSPSDLNDQSDPVASADIDQSAEPITATTTTTESLMEEENCPASGSPRTGTLSPPSEPEVDERNSPSVQSDLPSEVNSPSEPDDSSSIVPAVAVTAIPKLRLNALLASDPALNPDARNLKILHEESTKNHHQLEQETLPAPVDQKPSVKSQIPAVVDNSQRVKVFMCLPCGIGFSSRSTLEAHQAYYCSHRKEAEEDTTVGGGGGGSGAGLGNSSSGDKSTITSSGEPSAKSIKTGKQYACTQCSYSADKKVSLNRHMRMHQSSPAPSSNASNGGDDSSSQQVDRYCSECDIRFSNVKTYRAHKQHYCSSRRNDGQTTPKLAEPIVKTSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTNPILIIPYYLIRAASMIPGPLTSVSPGIPNPESTCFSLENGSLKPMATALSTSSITNNQIPHVDATPRTHPPPLPSTPSIPDASAVPPLLTEKNTRASSANSSSDSVKQIKKDVPIRDFAPLDLSLRRSPIQRAHRVRSSSSFMAPIDDRIDIETMMEGKENLSIDSGSITPEQIVCAPSLPNSPSMSPSPKRRALSPRSSSAASISPVPPSVMDHLPLRSMLSADIAMKLTESNIIPPLIAKQNLELAFKLSTASAAAAAAASASSKQNDSPKASTLLGHPGTPISVGTATGGQPQIFVKQGVSKCKECNIVFCKYENYLAHKQHYCSARNQEDTESKTSTPPSGSSTGGIDTNPIAYQQLICAACGIKYTSMDNLRAHQKFYCPKGGGDAASAPITKEKCSKCKVLHEIGQPCPPTAATAQPQCSYKCPVCDVVSLTASESRKHLETHGSVKAFRCSICRYKGNTLRGMRTHIRMHFDKKTSDFNEENYMSCILEDDGLEIPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIFNCEMCNYSSSYKGNVMRHMKLVHSQPGTSPSISPEVVIEENEPSSAIQTLNGDNNGSSLPGGFTIKTEPLEPIVVASAIKNNNSNSNSIANHHPHALHHLEPLAQVKSEPMDTDIGVIRSLHSPLSIPPPPLLNSTSPLSADENSLLRNSSSSGPGGMPLNQKYCQTCDISFNYTKTYLAHKQFYCKNKPRADTDSPSPVTPVQSPTMLTKNKENLEAAML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -