Basic Information

Insect: Scaeva pyrastri
Gene Symbol: L
Assembly: GCA_905146935.1
Location: LR989927.1:23838951-23854313[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 4.5e-06 0.00059 21.0 1.7 1 23 69 91 69 91 0.98

2 16 0.38 49 5.5 5.8 1 23 97 119 97 119 0.98

3 16 2e-07 2.5e-05 25.3 3.1 1 23 125 147 125 147 0.99

4 16 9.1e-06 0.0012 20.0 0.3 1 23 153 175 153 175 0.98

5 16 7.4 9.6e+02 1.4 0.2 3 23 239 261 237 261 0.81

6 16 0.0031 0.4 12.1 0.4 2 23 282 304 281 304 0.97

7 16 0.043 5.6 8.4 1.3 1 23 385 407 385 407 0.97

8 16 0.00034 0.044 15.1 1.1 2 23 415 436 414 436 0.95

9 16 0.00028 0.036 15.3 0.9 1 23 444 469 444 469 0.89

10 16 0.0012 0.15 13.4 2.9 1 23 561 583 561 584 0.96

11 16 0.00086 0.11 13.8 4.6 2 23 772 794 771 794 0.96

12 16 0.099 13 7.3 0.1 1 23 800 822 800 822 0.92

13 16 3.1 4e+02 2.6 0.3 2 23 830 851 830 851 0.92

14 16 5.7 7.4e+02 1.8 0.3 2 23 941 962 941 962 0.92

15 16 0.0072 0.93 10.9 0.0 1 23 972 994 972 994 0.96

16 16 1.9 2.4e+02 3.3 1.3 1 23 1001 1023 1001 1023 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	4.5e-06	0.00059	21.0	1.7	1	23	69	91	69	91	0.98
2	16	0.38	49	5.5	5.8	1	23	97	119	97	119	0.98
3	16	2e-07	2.5e-05	25.3	3.1	1	23	125	147	125	147	0.99
4	16	9.1e-06	0.0012	20.0	0.3	1	23	153	175	153	175	0.98
5	16	7.4	9.6e+02	1.4	0.2	3	23	239	261	237	261	0.81
6	16	0.0031	0.4	12.1	0.4	2	23	282	304	281	304	0.97
7	16	0.043	5.6	8.4	1.3	1	23	385	407	385	407	0.97
8	16	0.00034	0.044	15.1	1.1	2	23	415	436	414	436	0.95
9	16	0.00028	0.036	15.3	0.9	1	23	444	469	444	469	0.89
10	16	0.0012	0.15	13.4	2.9	1	23	561	583	561	584	0.96
11	16	0.00086	0.11	13.8	4.6	2	23	772	794	771	794	0.96
12	16	0.099	13	7.3	0.1	1	23	800	822	800	822	0.92
13	16	3.1	4e+02	2.6	0.3	2	23	830	851	830	851	0.92
14	16	5.7	7.4e+02	1.8	0.3	2	23	941	962	941	962	0.92
15	16	0.0072	0.93	10.9	0.0	1	23	972	994	972	994	0.96
16	16	1.9	2.4e+02	3.3	1.3	1	23	1001	1023	1001	1023	0.92

Sequence Information

Coding Sequence: ATGATGGCATTAAAAATGCTCTATCGCGGCCCAAGTTCGAGATTGGAAAATTTAATTGAAAAAATACAAGCTACCAAAGATGGCAATCCAGATCTGTACTCGACACACACCTCGTCCAGCTACTCGCCCTCCATGGATTCGGCAAAGTTGTTGGATAAGTTGACAAGTGATGGCATTAAGAGCGCGACCGACCGCGATGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCGCGCCTTGGGTATCTCAAGAAGCATGAACAGAGTCATGCCGAGCACCTACCATTCAAATGCGACTACTGTGCGAGACTTTTCAAACACAAACGGTCCCGTGACCGACACACCAAGTTACATACTGGCGATAGGCGATACAGGTGTCCACATTGCGAGGCGGCATTTTCAAGGAGTGATCATTTGAAGATCCACATGAAAACCCACGACAACCAGAAGCCATTCCAATGCACCATCTGCAATCGAGGCTACAACACAGCTGCGGCCCTAACATCGCACATGCAAAATCACAAGAAGCAGGCCGCAATTCTGGCGGCCGGCGGCAATCCGGCTGCCCTTAACTACAGTCCTCGATCGACTGGTTCCGGTTCGAGTAATGGCAGTTTGCAGAAACGTCGCTACACATCGATTGCCAATACGAAGAGTCCAAGCCCAAGTTCGCTGGAGTATGCCAAGCGGATGCGGAGCTCTTATGTCTCGTGCATGTACTGCACCAAGTCCGACTTTGCATCAATGGAACAGCTGAGCAGTCACATTCAAGCAATGCACGAGAAGGAGGCTCTGGCCAATCAATCTGCCGCAACTGCTGCGGCAAGTGGCTTTCAGATGTCCTGCGAGTACTGCACCATGAAGTTTCCCAGTGTTCCGGCAATGTTCCAGCACATGCGGACGACACACATTGACCGGCTGTCGAGCCCGAGCAGCTATTTCGAGCATTTCAATCGGTTAGCAGCGACTGGAACTTTCAGCCCTCGTCTGGCGACGCCAAAGTCCAGCGAGACTAAGATCAAAGTTGAAGAGCCAAGTCCCAAGGGCGAGGAGAAAACCGATGACGAACCAACCGATTTGAGTCAAAACAGGCGATCTGTTCAGACACCGTCGCAAGAATCGGTCGAAGCCAACGATCGGCCAGGGGTGTTCTTCTGCAATCAGTGCAGCGATGGTTTCCCCGATTTCGACAGCTTCCGCAATCATCTTAAGTCGCACATTGTGCAAGGACTCAGTTTGGTGTGTCACCATTGTGGCCAAACTCTGCGCGATCAACCAGAGTACGAGAGGCACATTGTTTCGCATTTTCTCATCACTTGCTCGGAATATGCCTGCACCGAGAAGAACTGCAGCAAGACTTTCTCCAAGCCGGACGAGTTGCAGAAGCACCTCTTCGACAACCACATTCAGACGTTGTTCAAGTGTCTGCTGTGTTCGGACCTTTTCGAAACTAAGGTAGCGGTACAAGTACACTTCGCATGCATTCACTCGCCCGAGAAGAAGATTTTCCGCTGCTCAGCCTGCATGGACACCTTCCATGGCGAACAAGAGTTCCATATTCATGTGAAAACCCGACACCAGACGATAGTCGGATCACCGATCCAATGCATGTTCTGCCGAGCTGTCTGCTCCACCGAGCTCGAAATGCATTTCCATCTAGCTGCCCATGCCCGTCAGTTCCGTTGTCCATCGTGTCCAGAGACTTTCCATGTCGAGTTCCTTCTTGATCGACACATGCAAACTCATCACCATGGACAGAAAGAAGTCGAGTCCACACCTCCTCCGCAGCCAGTCAATCCATCACCAGTGAACTCGATCAATCCACTCTACATGAGTGCTCTCTTCAACAAGCCTCCTCCTTCGAACCAAAATAATAACAACAGCATCCTGGACTACAACGCTTTTGCCATGGGCAAGAACCTCTTCGGCAACGCCTCTGGGAACAAGTTCTACAATCCTCTGCAGGTCGACACGGGTTCAGCCATGAAGCACCCGTCACTTGTGTATGCTAGCTTGAACCAACGCTACTTTGACACTAACCGAACCATTCTCGAGATGTACAACCAACATCAGCAGGACAAACTAGCAGCCGGACCCGTGGCCAGTATGTTCACCAGTCCCAGCAACAATAACAACAACCATCGCAACGCACCAAAACTCCCACAAGAGTCCAACAAGCCGTCAGATCGAGCTATTGCCGCCGGAGGTGGGTTCAGCTGCGGCATGTGTGAACGCAACGATTTCCGCACCGAAGCCGAAATCCACTCACATCGCAAGATCGTACATAATCTCAAGACCGGAGTAAGTCTCCGCTGCGCTTATTGCAGTGGAAACTTCAAGTCACGCAGTGAGCTCGAACACCACATGAAAACTTGCCACAACTCAACCGGCAAGCACAAGTGTTTGATCTGCGATGAGATCTTCCCATCGCCCGCAATACTCGCCGAGCACAAGTTGCAACATTCCAAAGTCGGGCAGTCGGGAAAGTGTTCCCACTGCGCCAAGGCCCTGCCCGATGTCATGGCTTTCAAGGGCCACCTCCTGGACCACAACACCGAGGGACAGATGCCAGTGCAATGCATCTGCTGCCGCCAAACTCTTCATTCTGATTTTGAGATCGGTCTGCACGCCAAATTCCACACTAAGTCATCGTCTGTTGCGGAGAGTGTCTGTGCCCTGTGCTTGGAAACGATTCCCAACACCGTCGACGCCAAGGTCTGCGACAAGTGCTGTCGCAAGCATAACCTCAATAACAAGTACTCCAACCAGCGCAGCAACTTCGACACCAACTCAGGACAATCAAGCTACGTGGAGAATCGCTGCAATCTCTGCAACGTCATCATGCCGCACGCACAGAAACTCCAAGAGCACTTGGTGGAGCACACATTCGCCGGCTGTGAGGACAGAGGCTTCTCGTGCTACATATGCTCGGCCGTCTTCACAGCTCCAGCTGGCCTGCTCACCCACATGACCGAGCACGGAGCCAATTCACGCCCCTACGACTGCAATCTCTGCACTGACAAATTCTATTTCCGCGCCGAACTCGATCACCATTTGGTCGATCACGAAACCCGCGATCGATCAAAGACCTCCCATTCCCATGGCAGAGATGCTAGTCCCGTGATCGATGAAAACAAATCATCATTTCCCGGCGAACTGCTGACTCCTGCTGCAGAGCCAGAATCCAAGAAGCTCGAGCTCAAAAACGAAACCCTCGATGAGAAGCCAATGGAAGAGGACGACGACGAATACATCGAAGTTGAGAAAGTTCCCGAGACTCTCACATCGCAGGAGAAATCATCCCGCTCTTCGCACGACAAGGACAATTAG
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKDGNPDLYSTHTSSSYSPSMDSAKLLDKLTSDGIKSATDRDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCDYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTICNRGYNTAAALTSHMQNHKKQAAILAAGGNPAALNYSPRSTGSGSSNGSLQKRRYTSIANTKSPSPSSLEYAKRMRSSYVSCMYCTKSDFASMEQLSSHIQAMHEKEALANQSAATAAASGFQMSCEYCTMKFPSVPAMFQHMRTTHIDRLSSPSSYFEHFNRLAATGTFSPRLATPKSSETKIKVEEPSPKGEEKTDDEPTDLSQNRRSVQTPSQESVEANDRPGVFFCNQCSDGFPDFDSFRNHLKSHIVQGLSLVCHHCGQTLRDQPEYERHIVSHFLITCSEYACTEKNCSKTFSKPDELQKHLFDNHIQTLFKCLLCSDLFETKVAVQVHFACIHSPEKKIFRCSACMDTFHGEQEFHIHVKTRHQTIVGSPIQCMFCRAVCSTELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHHGQKEVESTPPPQPVNPSPVNSINPLYMSALFNKPPPSNQNNNNSILDYNAFAMGKNLFGNASGNKFYNPLQVDTGSAMKHPSLVYASLNQRYFDTNRTILEMYNQHQQDKLAAGPVASMFTSPSNNNNNHRNAPKLPQESNKPSDRAIAAGGGFSCGMCERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCAKALPDVMAFKGHLLDHNTEGQMPVQCICCRQTLHSDFEIGLHAKFHTKSSSVAESVCALCLETIPNTVDAKVCDKCCRKHNLNNKYSNQRSNFDTNSGQSSYVENRCNLCNVIMPHAQKLQEHLVEHTFAGCEDRGFSCYICSAVFTAPAGLLTHMTEHGANSRPYDCNLCTDKFYFRAELDHHLVDHETRDRSKTSHSHGRDASPVIDENKSSFPGELLTPAAEPESKKLELKNETLDEKPMEEDDDEYIEVEKVPETLTSQEKSSRSSHDKDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01542500;
90% Identity: iTF_00427670;
80% Identity: -