Basic Information

Insect: Scaeva pyrastri
Gene Symbol: Rreb1
Assembly: GCA_905146935.1
Location: LR989929.1:29922024-29928111[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.033 4.3 8.8 0.8 1 21 236 256 236 258 0.93

2 14 0.00031 0.041 15.2 0.2 1 23 268 290 268 290 0.98

3 14 9e-06 0.0012 20.0 5.2 1 23 296 318 296 318 0.98

4 14 0.46 60 5.2 6.2 2 19 523 540 523 546 0.95

5 14 4.3 5.6e+02 2.2 0.6 1 19 586 604 586 606 0.78

6 14 0.0083 1.1 10.7 0.1 1 23 756 778 756 778 0.97

7 14 0.00017 0.022 16.0 1.7 1 23 787 809 787 809 0.99

8 14 0.00043 0.056 14.7 2.0 1 23 815 838 815 838 0.97

9 14 0.00089 0.12 13.8 2.1 1 23 1184 1207 1184 1207 0.95

10 14 8.1e-05 0.01 17.0 0.3 2 23 1515 1536 1514 1536 0.97

11 14 0.14 18 6.9 6.3 1 23 1542 1565 1542 1565 0.97

12 14 2.8 3.7e+02 2.7 6.3 1 23 1667 1689 1667 1690 0.95

13 14 0.079 10 7.6 1.1 3 23 1739 1759 1738 1759 0.91

14 14 0.0013 0.17 13.2 4.8 1 23 1765 1787 1765 1787 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.033	4.3	8.8	0.8	1	21	236	256	236	258	0.93
2	14	0.00031	0.041	15.2	0.2	1	23	268	290	268	290	0.98
3	14	9e-06	0.0012	20.0	5.2	1	23	296	318	296	318	0.98
4	14	0.46	60	5.2	6.2	2	19	523	540	523	546	0.95
5	14	4.3	5.6e+02	2.2	0.6	1	19	586	604	586	606	0.78
6	14	0.0083	1.1	10.7	0.1	1	23	756	778	756	778	0.97
7	14	0.00017	0.022	16.0	1.7	1	23	787	809	787	809	0.99
8	14	0.00043	0.056	14.7	2.0	1	23	815	838	815	838	0.97
9	14	0.00089	0.12	13.8	2.1	1	23	1184	1207	1184	1207	0.95
10	14	8.1e-05	0.01	17.0	0.3	2	23	1515	1536	1514	1536	0.97
11	14	0.14	18	6.9	6.3	1	23	1542	1565	1542	1565	0.97
12	14	2.8	3.7e+02	2.7	6.3	1	23	1667	1689	1667	1690	0.95
13	14	0.079	10	7.6	1.1	3	23	1739	1759	1738	1759	0.91
14	14	0.0013	0.17	13.2	4.8	1	23	1765	1787	1765	1787	0.99

Sequence Information

Coding Sequence: ATGTTGAAAACAACGATAAAGAAAGAAATAACTGATATTTCGTTGCGGAAAATGGATCGACGCCAATCAACAACATCAGACTCGTCTGTTGAACCCATGGACTTGGGTCGATTAAATTCGAAAATATCCACAGATATGACCGATCATAGCAGCATAACATTGCCAACAATAGCAACACAAAATAAAGATGCCATTTTATCAGATGCCAATACTAAGTATCGCTACGAATCCGATGCTGATGAATCAGCCGATGATAGAGATAGAGATCAACAAAGAAGGTCACACAGTCAACATCACTACCATCATCGTCGGCGTGGCAATACGAGTCGCGAAAAACGCACTGTGCTCATGGAATGCACCGATAGTCCACATTCCTTGCGAAAGAAATTTCGATTCAGCAGTAATAATCAAAATAATGCGCCTATGCCTGATGCTGTGATCAATTTAAAAACAAAAACATCGAATAATGATACTTCAGCAAAATCAACAACAGCTTCAACCAATTTAACAGCAACAAACAACGAATCGGGATTTGTGGATGCTAGCATAAGTCAAGTTTTAAACACATCAGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAGTAATGTTGCCTCGGCCATATCGAGTCCAGAGTCGGGTATGGGTGAACGTGATGATATGAAGTACCTTTGCCCAATTTGTGAAGTTGTTTCGGCGACACCGCATGAATTCACCAATCACATTCGATGTCATAATTATTCATCTGGGGACACCGAAAATTTCACTTGCCGCATATGCTCCAAGGTTTTATCATCTGCCTCTTCTTTGGATCGGCACGTTTTGGTGCACACTGGAGAGCGGCCCTTTAACTGCAAATATTGCCAATTGACATTCACTACAAATGGTAATATGCACCGTCACATGCGAACCCACAAACAACACCAGCAGCATTATCATCGCAATTCAAATGGTACAAAAGGTGCAAATGGTAGCAGCTCAAACCTTTTACCAGTTCTACCACTTACTGAGCCATCGCCAGCAACTCAAACATCAACTATTGCGAGTGCTTTGCCTCCGAAAACTACAACAACCAACACTGGCAACAATGGTGCTGTCTGTAACACCAATGGTGACACAAGTGCGGGTGCAGGAGATGGTTGTGGTGGCGAAAGCTATGACAGTGATGGTGGTTGCTCAACAGATTCATCGAGTGGCATCAGCCAAAGTTCCAATAACAACAATAATAGCAATACAAACAACAAAAATATAAGCAATTTTAAACGCAAGAGCACCGACAGCTTGGATGACTTGGCCATTATGAAACGACGCGTGAAGACCACGATTAACAACAACAATATTATCGATAACATTCACGCCATCCCCGAGCAAAGTGGAATCGAATTACAAGGCATCAACGATGTTAAGCAACAGCAACATTCAGAGTCGCAGCAAAAGCTCTTTTGCCCGGTTTGTAATAGTGATGATTTCGGAGGGATGCTTGCATTGGGAGATCACATGGACAGCGATCATTCGGACATTCCGGCTAAGTGTCGTCACTGTGATGTAGTTTTTAAAACCCACAAGCAGCTAAATCTGCATCCATGCACGAGTAAACATAAAATTACACAAGGTTTTAAGGACCTAACGTTTGTGGACTTCTCTAGCGAAAAATTCCCGCTAATTGCAAAATCTTTGTGCGAGCAGAGTATTCGGGCACCGGTTGGAGCTCAAAAATTTGAATGTTCGAAATGTTACCGAGCATTTCCATGCGCGAGTGCAGTTGAAATTCACGAGAAAGACTGTTCGACATCAGGTTTGAATTTATTCGTAGAAAGTCTACCCCAGCGAAAGCAAAGAGCTTACAGTGAAAGCTCCGCAAACGCTGACGATGATGATAATAGGCGTGAGGAGTTTTTCAATCGTCTCTACTTGACAAACAAATCCACAGCACAAAGTATGACAAGTTTATCTGTATCTTCACCATCCCTGTCGGATGTTAAGTCCTCAGAGCTTGACAAGACACCTGTGAAAAACTCCCAACTGGAACATTTCCAAGACACCAAAGAACTTGCTGACATACAATCGATCCTCAATATAACTTCGTCATCCTCGACAAGCAATTTTCTTCGTAATTTTGAAAATTCTGTTAACGCGCCAATAAGTAATTATGGCGCTGAAAATGGCGAAGAAGAGGCTCAAGATGCTTTCACTTCAGAGTTTCGAAAAATGAAACTGCGAGGGGAATTCCCTTGCAAGCTCTGTACAGCTGTGTTTCCTAATCTGAGAGCACTCAAAGGCCATAACAGAATACATCTAAGTGCCGCTGGTCCAGGTCCTTACCGTTGTAATATGTGCACATATTCCATACATGACAAAGCAGCTCTCGTCCGACACATGCGCACCCACAACGGTGACCGGCCTTACGAGTGTGCCATTTGTAATTATGCATTCACAACAAAGGCCAATTGTGAAAGGCATTTACGAAACCGTCACGCAAAGACCACACGTGACGAGGTTAAGCGTGCCATTATTTACCATCCGTCAGAAGACTCAAACTGTGACGATGCCATGAAGAAGTTGCACATGTTTTCTTCACCTGAATTCGATCAAGACGATATGGAGCAACATCATCCACCTAAAGATCGATCAACTCCGGTTTCTCATTTGAAAGAAATGCTGCAAGCGGAATCCAAGCCAATGAAGATCCAAGTTAAGAGTCTTGAAAAATTGATCGATAAACCATCTTTTAATCAACCTGATGAACTAACAAAAGATCATGAGCCAATAATTCGCGAACAAGAGAAAGAGATCAGCAGACCAATTGACCTGAGCATGGATGCATTGGACTTGAGCAAAAAATCTGTAAAAACTGAAAAACTAGAAGAAAAAAGAGGTCAAACTCCTCCACCACAAGCGTCACGTTTAAATGCCGCCCGTCTATTATCTGATGAGCCAAATATTGACATGCGATTACTCGAGAAAAACCAACAACTTCTGTTGGCCCAGCAGAGGCTTCTTAATGAAGCTATGCCAAAAATGGATCCCGCACACTATTTTCAACTGTCGCAGCTCTACAATAACTTAGTGTTTCAGCCACTTAATCCATTTTTACTACAGAACTCCTTTCTTTCAAATAACATCAGTGATTTGAATAAGTTTGCTCCAATAGTGAATCCCCTTTATAGTGGAACATCTGTAGAGAGCCCGATTGCACGAGGTGAAAAACAAAATCAACCAAGTTCACTTCCTAAACCCGTCCAAGACGAAAGCCATGCAACAGTAAAACAAATTAACTCACAAACCCAATCCCCAGTGCCAGCTCAAAACCAGCCGTTGCCACGCAATCCAACACCGTCTCTATCGCAAATGCCAACTTTACCAAGAAGCCATCAGCATTTAATAAGTGGATCACATCCCTCAGGAATGCTTCCATCTTCTCTACCCAGTTCTGGACCTGTTAAAATGGTCATCAAAAATGGAGTTCTTATGCCGAAACAAAAACAACGACGCTACCGCACTGAACGTCCATTTGCTTGTGAACATTGCTCTGCTCGGTTCACCCTGCGCTCCAACATGGAACGTCATATTAAGCAACAGCATCCTCAATATTGGGCTCAACGACAACGTAGTGGCCATCACATAATGCGTGGTCGTGCCAACAGTTCCTCAATACACTCCCACTTACAATCAGCTCACTCGCCCCTAGAAGCTCAACATCCGATTGGCCCCAGTGGCATGATGACAAACCCGTTGAGTGCTATTTCAGATCAAGTTAAATACGCTATACTTGCCCAACAACTAAAAGCTCGCAAAGAGACAGATATTCTGCAACAAGCCTTGTCACAAGGATCCAGCAGTGTTCTCGCACAGAACCCTTCATCTGGTATAAGCAGTATTCGCCAATCGCTCAGCGCATCATCGAACACCAACAATGGCAGTACTGAAGATGATGACCCAAAACTAGTAATCGATGAAGATGAGGATGATCAGGAAGAAGAAGAAGACGATGACGAAGAAGATGATTGTGAAGATCGGAAGCCGGAAAACTTGACAAAATTTCGAGATTTTCCAGAACAGACAACAAATGAAGCAGCAAAGAAAGTTGCCGAATCTATCCTCGAGCAAGCAATGAAAGCTGGGAGCACCAAGGTCTCATACACTAAGGATGAAGAACACGATGGAACAGCTAGTAAGGATTTCGGCCTTAAGCTTTCAAAGAATATGATTGCTCAAGCGGAGTCAGTAGGCAAATTTCTAAAAGAAGTCGCCAGCTCACCATTTAAAGATGAATCAAATGATTTGGTTTCAGTCTCTAGATTGGTTGATAACGCAACTAATTCAATGTCCTTCAATACCTATTTTCGCCCCAGTGACGTAGTCAATCAAATGGAGCAAAGTGACGAGGAAGGGCTGGTCGCATCAGGTAGTGCATCAGAAAGCAATAATTCTGGTCCAGAAGATATGGTCAATTCTCAAGAGCCCAAAAAAAAATCAGCATACAGTTCAGCACCTAATCGTGTCTCTTGTCCATATTGCCAGCGAATGTTCCCGTGGTCCAGTTCGTTGCGAAGACACATTCTCACTCATACCGGCCAAAAGCCATTTAAATGCTCACATTGTCCACTCCTCTTCACAACTAAAAGCAATTGCGATCGCCATCTGTTGCGCAAGCATGGAAACGTTGAGTCAGCTGTTTCATTGTACGTTCCCATCGAGGATGTCAATGAACCTTTGCCTGTCCCCAAATCTGTGGAAGAAATCGAACTACAACAGCAGCAGCAACTTCTTCAACAGAAAAAACAAAAGAGATTAGAAGAACTTAAAGAAATTGAAAGAATCCAGCCACCACTTCAAAAGCCATTAGAGGAGAATGAGGAGCCGACGCAGAATGTAAATTCAACCACAGCCTCCACAAATGTCACTCCTAAACTTGAGCCAATTCCTTCTTGTCCAATGATTTCGTCTTCAGAGTTGCCATTCAAGTGTCATCTATGTGACAGTTCGTTCGCGGAAAGATTCCAATGCCTTGATCATATAAAAATTCATCATGCTCAAGAATTTTCACTTCTTCTATCGAAGGGCGCCATAGACAATGAAGCCGATGTTAATAGCCAAGTTCAGTCCACCGAAGATGATGAAAAACGCGACGAAAGCCGCGGTAAGTACCCAGACTACACCAACCGTAAGGTAATATGTGCTTTCTGCATGCGCCGCTTCTGGTCCACCGAGGACTTGCGTCGGCACATGCGAACGCATTCTGGTGAAAGACCATTTCAATGCGATATATGCCTACGTAAATTTACCCTGAAGCACAGTATGTTGCGACACATGAAAAAACATAGCGGAGGCAGCCATTCCAGCAACGGAGCCGCCAATGCTGGCAACAGTGGGTCTGATGTCTCCGATGATGAACAACCCCCTTCGAGTGTTATGCTTGCCAATGCCCTACGTTCTCACAAAATTCAAGAGCTTTTCTCCAAAGTCAACAGTGAGTGGCGCAATAATCGTATTTCCGGTGAGCACAAAGAGAATATCGAAGAGCACAACAACCAGTCTGATCTTATTGGAAACTTGCTGGGAATCAGTGATCAAGGAATTCTGAACAAACTGCTTTCTTCTGCTGATGAAGCAGCCAAATTTCTAGGCGTTGAAAAGTGA
Protein Sequence: MLKTTIKKEITDISLRKMDRRQSTTSDSSVEPMDLGRLNSKISTDMTDHSSITLPTIATQNKDAILSDANTKYRYESDADESADDRDRDQQRRSHSQHHYHHRRRGNTSREKRTVLMECTDSPHSLRKKFRFSSNNQNNAPMPDAVINLKTKTSNNDTSAKSTTASTNLTATNNESGFVDASISQVLNTSGXXXXXXXXXXXXXXXXXXXXXXSSNVASAISSPESGMGERDDMKYLCPICEVVSATPHEFTNHIRCHNYSSGDTENFTCRICSKVLSSASSLDRHVLVHTGERPFNCKYCQLTFTTNGNMHRHMRTHKQHQQHYHRNSNGTKGANGSSSNLLPVLPLTEPSPATQTSTIASALPPKTTTTNTGNNGAVCNTNGDTSAGAGDGCGGESYDSDGGCSTDSSSGISQSSNNNNNSNTNNKNISNFKRKSTDSLDDLAIMKRRVKTTINNNNIIDNIHAIPEQSGIELQGINDVKQQQHSESQQKLFCPVCNSDDFGGMLALGDHMDSDHSDIPAKCRHCDVVFKTHKQLNLHPCTSKHKITQGFKDLTFVDFSSEKFPLIAKSLCEQSIRAPVGAQKFECSKCYRAFPCASAVEIHEKDCSTSGLNLFVESLPQRKQRAYSESSANADDDDNRREEFFNRLYLTNKSTAQSMTSLSVSSPSLSDVKSSELDKTPVKNSQLEHFQDTKELADIQSILNITSSSSTSNFLRNFENSVNAPISNYGAENGEEEAQDAFTSEFRKMKLRGEFPCKLCTAVFPNLRALKGHNRIHLSAAGPGPYRCNMCTYSIHDKAALVRHMRTHNGDRPYECAICNYAFTTKANCERHLRNRHAKTTRDEVKRAIIYHPSEDSNCDDAMKKLHMFSSPEFDQDDMEQHHPPKDRSTPVSHLKEMLQAESKPMKIQVKSLEKLIDKPSFNQPDELTKDHEPIIREQEKEISRPIDLSMDALDLSKKSVKTEKLEEKRGQTPPPQASRLNAARLLSDEPNIDMRLLEKNQQLLLAQQRLLNEAMPKMDPAHYFQLSQLYNNLVFQPLNPFLLQNSFLSNNISDLNKFAPIVNPLYSGTSVESPIARGEKQNQPSSLPKPVQDESHATVKQINSQTQSPVPAQNQPLPRNPTPSLSQMPTLPRSHQHLISGSHPSGMLPSSLPSSGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWAQRQRSGHHIMRGRANSSSIHSHLQSAHSPLEAQHPIGPSGMMTNPLSAISDQVKYAILAQQLKARKETDILQQALSQGSSSVLAQNPSSGISSIRQSLSASSNTNNGSTEDDDPKLVIDEDEDDQEEEEDDDEEDDCEDRKPENLTKFRDFPEQTTNEAAKKVAESILEQAMKAGSTKVSYTKDEEHDGTASKDFGLKLSKNMIAQAESVGKFLKEVASSPFKDESNDLVSVSRLVDNATNSMSFNTYFRPSDVVNQMEQSDEEGLVASGSASESNNSGPEDMVNSQEPKKKSAYSSAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAVSLYVPIEDVNEPLPVPKSVEEIELQQQQQLLQQKKQKRLEELKEIERIQPPLQKPLEENEEPTQNVNSTTASTNVTPKLEPIPSCPMISSSELPFKCHLCDSSFAERFQCLDHIKIHHAQEFSLLLSKGAIDNEADVNSQVQSTEDDEKRDESRGKYPDYTNRKVICAFCMRRFWSTEDLRRHMRTHSGERPFQCDICLRKFTLKHSMLRHMKKHSGGSHSSNGAANAGNSGSDVSDDEQPPSSVMLANALRSHKIQELFSKVNSEWRNNRISGEHKENIEEHNNQSDLIGNLLGISDQGILNKLLSSADEAAKFLGVEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01357374;
90% Identity: iTF_00335372;
80% Identity: -