Spyr016298.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- ZNF217
- Assembly
- GCA_905146935.1
- Location
- LR989927.1:77456984-77460525[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.039 5.1 8.6 0.1 2 23 89 109 89 109 0.96 2 11 9.1e-07 0.00012 23.2 0.7 1 23 115 137 115 137 0.99 3 11 1.8e-05 0.0023 19.1 0.7 1 23 143 165 143 165 0.95 4 11 1.3e-07 1.6e-05 25.9 2.1 1 23 171 193 171 193 0.99 5 11 0.17 22 6.6 0.7 1 21 199 219 199 223 0.77 6 11 1.6e-05 0.002 19.3 2.2 2 23 318 339 317 339 0.97 7 11 0.015 2 9.9 0.4 3 23 354 373 352 373 0.96 8 11 2.7e-06 0.00035 21.7 0.7 1 23 379 401 379 401 0.99 9 11 4.4e-07 5.7e-05 24.2 1.3 1 23 407 429 407 429 0.97 10 11 2.4e-07 3.1e-05 25.0 0.9 1 23 435 457 435 457 0.99 11 11 0.00055 0.072 14.4 0.4 1 22 463 484 463 487 0.92
Sequence Information
- Coding Sequence
- ATGTCAGAAACGTCCCTTCCAGACATTCAGGAAGAAACAGTAGACGAATTTCAAACGAGTTTGTACAATTCGAATGCAGATTGTGATACAAACATTCAAATAGAAAGAGTGACGAGTGAAGAAAAGTTTAATGCTGAATGTACCAATGAAGTAGATACAAAATCTTATGACGAGAATACCACTAGCAAATTCATTCGACCAAAACGATTACTTAAAAAACACAAAGAACAACCTGTCAGACAACCGAAGGAAAAGAAGTTTGGTGTTTGTCCTTATTGTGGTGATACGTATGCCCTATCAAGTCTGTCCTTACACATTCGTCGTCATACTGGTGAAAAACCCTACAAATGCGACATTTGTGAAAAAGCGTTTGTTGAGTTGTACGATTTAAAACGACATAAACGCATGCACACCGGGGAGAAACCGCACGTATGTGCAACTTGTGGCAAAGCTTTCTCACAACAAAATAAACTAGCGCGTCACAACCTGGTCCATACCGGTGAACGTCCATACAAATGTGATCGTTGCGACAAATCATTTACTCAAAGAAATGAATTAAATCTTCATATTAGGCGTCACACTGGTTCTAAACCCTATATGTGTGGCATCTGTGGTGAGTGTTTCCTTACTGGAACAATTTTAAGGAATCATCAAAAATCAGCATCGCATTTTGAAGAAGATAAACAAGACCGTTTTATAAAAATTCGGGTAACAAATCCATCTCGTTCATACCGAAATAGGGGAAGCAAAAACTCTCAAAAGCCAAATAAAGTTGTTGAAGATAATGTGGACAATAATTCTATTATGTCCGATTCATCATTTCCTGGAGTGGTTAAAGATTCAGGAGAAATAAACGAATTGACAGAATCGAATGCCAAGGCAGAAGACCCCAAAGTGCGAAAGAAAATACAAAGAGTCAAATCAGATAGAGCCAAAGAAAAAGAATCACTTAAGTGTCATGAGTGTGGCAGAATTTTGTACAGTAAACGTAATCTTTTAAGGCACATCAATAGACACAAGGAGGGATTTTTCATAAAAAAGCAATGCAAACTAAGTATTTGCCCTTATTGTGGTGATTGCTTCCCCCAAACAAGTTTGGGAATACACATTCGTCGTCATACTGGTGAAAAACCATACAAGTGTGATATGTGTGAAAAGGCGTTTGTTAGACTTCAAGATCTAACAATTCACAAACGTTCGCACACTGGTGAGAAACCACACGTTTGCTTGACATGTGGTAAGGCTTTCTCGAGACAAAATAAATTGGTCCGACATATTCGGATACACACTGGGGAACGCCCATATAAATGTAATCAATGCGATAGGGCCTTTGCACAAAGAAATGACTTAAATATGCATATTCGACGTCATACTGGCGAAAAGCCCTATGAATGTGGTGTGTGTGGACAGCGTTTCTTTAATGGAACGTTATTGAGAAATCATCAAAAACTGGAATCGCATTTTGAAGAAGAGCGACAAGATCGTTTTATAAAAATTCGAGTGACAAATCCAACTCGATCTCATCGAAACCCTAAGAGCAAACGACTACAAGAGAAGAATGAAAAAGAGTCCACTCAAGAATAA
- Protein Sequence
- MSETSLPDIQEETVDEFQTSLYNSNADCDTNIQIERVTSEEKFNAECTNEVDTKSYDENTTSKFIRPKRLLKKHKEQPVRQPKEKKFGVCPYCGDTYALSSLSLHIRRHTGEKPYKCDICEKAFVELYDLKRHKRMHTGEKPHVCATCGKAFSQQNKLARHNLVHTGERPYKCDRCDKSFTQRNELNLHIRRHTGSKPYMCGICGECFLTGTILRNHQKSASHFEEDKQDRFIKIRVTNPSRSYRNRGSKNSQKPNKVVEDNVDNNSIMSDSSFPGVVKDSGEINELTESNAKAEDPKVRKKIQRVKSDRAKEKESLKCHECGRILYSKRNLLRHINRHKEGFFIKKQCKLSICPYCGDCFPQTSLGIHIRRHTGEKPYKCDMCEKAFVRLQDLTIHKRSHTGEKPHVCLTCGKAFSRQNKLVRHIRIHTGERPYKCNQCDRAFAQRNDLNMHIRRHTGEKPYECGVCGQRFFNGTLLRNHQKLESHFEEERQDRFIKIRVTNPTRSHRNPKSKRLQEKNEKESTQE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -