Basic Information

Insect: Scaeva pyrastri
Gene Symbol: -
Assembly: GCA_905146935.1
Location: LR989927.1:52263767-52266992[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.015 2 9.9 0.5 2 23 125 147 124 147 0.96

2 20 0.0026 0.34 12.3 0.6 1 23 153 175 153 175 0.98

3 20 5.2e-05 0.0068 17.6 1.3 2 23 184 205 183 205 0.98

4 20 0.0047 0.61 11.5 0.6 1 23 211 234 211 234 0.95

5 20 0.00039 0.05 14.9 2.9 1 19 286 304 286 306 0.97

6 20 2.3e-07 3e-05 25.0 0.8 1 23 314 336 314 336 0.98

7 20 5.8e-07 7.6e-05 23.8 1.1 1 23 342 365 342 365 0.98

8 20 0.11 14 7.2 2.1 1 23 375 398 375 398 0.95

9 20 2e-06 0.00026 22.1 1.7 3 23 494 514 492 514 0.97

10 20 3.6e-06 0.00046 21.3 1.0 1 23 520 542 520 542 0.99

11 20 0.8 1e+02 4.5 2.6 1 23 553 577 553 577 0.91

12 20 0.0038 0.49 11.8 1.4 1 20 583 602 583 604 0.93

13 20 0.33 43 5.6 3.4 1 23 642 664 642 664 0.97

14 20 7e-06 0.0009 20.4 3.3 1 23 670 692 670 692 0.99

15 20 5.7e-05 0.0074 17.5 1.7 1 23 698 720 698 720 0.96

16 20 7.8e-05 0.01 17.1 2.1 1 23 726 748 726 748 0.97

17 20 3.1e-06 0.0004 21.5 2.7 1 23 854 876 854 876 0.97

18 20 0.00015 0.019 16.2 2.2 1 23 882 904 882 904 0.99

19 20 4.3e-05 0.0055 17.9 0.5 3 23 913 933 911 933 0.98

20 20 0.00028 0.036 15.4 3.4 1 23 939 961 939 962 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.015	2	9.9	0.5	2	23	125	147	124	147	0.96
2	20	0.0026	0.34	12.3	0.6	1	23	153	175	153	175	0.98
3	20	5.2e-05	0.0068	17.6	1.3	2	23	184	205	183	205	0.98
4	20	0.0047	0.61	11.5	0.6	1	23	211	234	211	234	0.95
5	20	0.00039	0.05	14.9	2.9	1	19	286	304	286	306	0.97
6	20	2.3e-07	3e-05	25.0	0.8	1	23	314	336	314	336	0.98
7	20	5.8e-07	7.6e-05	23.8	1.1	1	23	342	365	342	365	0.98
8	20	0.11	14	7.2	2.1	1	23	375	398	375	398	0.95
9	20	2e-06	0.00026	22.1	1.7	3	23	494	514	492	514	0.97
10	20	3.6e-06	0.00046	21.3	1.0	1	23	520	542	520	542	0.99
11	20	0.8	1e+02	4.5	2.6	1	23	553	577	553	577	0.91
12	20	0.0038	0.49	11.8	1.4	1	20	583	602	583	604	0.93
13	20	0.33	43	5.6	3.4	1	23	642	664	642	664	0.97
14	20	7e-06	0.0009	20.4	3.3	1	23	670	692	670	692	0.99
15	20	5.7e-05	0.0074	17.5	1.7	1	23	698	720	698	720	0.96
16	20	7.8e-05	0.01	17.1	2.1	1	23	726	748	726	748	0.97
17	20	3.1e-06	0.0004	21.5	2.7	1	23	854	876	854	876	0.97
18	20	0.00015	0.019	16.2	2.2	1	23	882	904	882	904	0.99
19	20	4.3e-05	0.0055	17.9	0.5	3	23	913	933	911	933	0.98
20	20	0.00028	0.036	15.4	3.4	1	23	939	961	939	962	0.95

Sequence Information

Coding Sequence: ATGCAAAATAACACGGATTTGTTCACTCCACTTCCAGTGGAGTTATCCACTCCCAATGGGCTCCTCTATCAATTTAACGAGGAGAAGTTTCTTAAAAGTCATGATTTCTACGCCTTTGAAATGGATTGTTTTGCTGTGCCCGAAATTAATGACATTCCCCCACCTATTGTTGGCTTGAGTCCAATTCCCGAGGAAACTAGTTGCTCGTTGATGGTTAATCCGTTGGAACCTTTGTTTTCCCCTGCCGAACCAACGATATCGGTAGCGCCAGTACCGACAGCACTTCCATCGTCTTCATCAGTTCACATTATTGCCCCTACCAATTCGACTCAAGATGACCAACCAGTAACAGTTTCAGCGGTTAAGCAACTTACATGTGACCTATGCTTGGAGAGTTTCTTTTCGACTCAGGCCCTTCGTCTGCACAGACGAGTCCAACACATTGCCAGCAAAGAATTTCGTTGCAGAAAGTGCCCTTCATCGTATAACTTCGAATCAAATCTTATCCTACATTTGGCATCTCATGTCCCTAGTTGCAGTACGAATAAACAGTGTCCCGAGTGTAAAATGGTCTTCAAACGTATATCGAGCTTTAAAGGTCACCTAAAAACACATCTAACTAACGATAGATTCAAGTGCAATCGTTGTGAAAAGGAATTCGAACTAAAGGGCTACTACGAACAGCATTTGGCCAATGCACACAAGCCAGGTGCTGATGGCATCATCGAGGAGATTCTCTTGAAAGTTGTAAGTCGTTATTTCTTAATTATAAATTTAATTTTAAAATACATATTTGCAAATCCACAGGCAAATAATACAAAATGTAGAAAGTCATCTAAACTGGTCAATGGCAAATATCGTTGTCAATATTGCGAGAAGAAGTTCACTAAACCTTGTCTACTGAAACGGCACGAAGTCTGCCACACAGGAGTAAAACCGTTTCAGTGTGAACAATGCGATCAAGGTTTCACACAAAAGTCTTCCCTTGAAAGGCATATGCTATTGCATCAGGGTGTCAAGGACTTTAAGTGTCCTATGTGCAGTTATAGCTTCTCTCAAAAGAACAACCTCATTGTCCACATCCAACGAACACATCCAATCAACGCTAATAACGAGAATATGTTCGCCTGCGAATTCTGTACGTGTCTTTTTACAAAATTAAGCAGTGTCAATAGGCATCGAGCTATGGTGCATCCAGAAAAAGAAAACACAAACGGGGAGCATGCGACCGACGGCGGTGACGATGATGACGATGATAATGTGAATGTTGCAAAAGTCATGGAACAGTTGAAGAGTTTTCAAGAATCTATGAAGATTATGGATATAAAAGTGTCTGCATTGGAATTATCTCCATTGAAACCACCCTCACCTGGACCAGTCGTCCATACGGTAACAATTGTAGATACATTAAATACAAACAAGGCAAAGACTTTCAAGAAAGCCAAAGAAATTATTTACAAGGAAGAACGAACAATCGCATGTGCTTATTGTGATAAACCATTTAAGCGGCAGTTTGATCTACTGAGGCACCATCGAACTCACACAAAAGAAAAGCCATTCCAGTGTAATGTTTGCATTAAGAGTTTCTCTACAAAAAGTGGCCTTAAAATTCACCTCAACACTCATAACTCATTTGAAGCTACGCCAGCCAGAGCCCATGAATGTTTAGTAGACGAGTGTCATAAACGTTTTGCATCATTGCGTGCCTTGGATTTTCACACCAAAACTCACACGAATTCCATATCGTACATTTGTCCAGTTTGTTCAAAAATTTTCACATCTAAAGCTGGTTTTTCTTCTCACAAGCATCATACAAAAGATCAGGAATTCGATAGTATATGTAAGCTTTTAAAGTCTCCCGTACAAATTGAGCCAAACATCGCCGAAGAAGCTTTCAAAGCTGAGGAGTATCTAAGAAGAAGTCACCAATGTTTTGTGTGTGGCTTGAAAATGCAGAAATTATCCCACTTGAGGCAGCATGAAGCCACTCATCGGGGGGAGAGGCAATATCAATGTGAAATTTGTTTTAGGTGCTACACAACACAGAGTTCTCTGAATCTTCATCTGAAGATCCACACTGCCGAGAAAACTCACATCTGTCAAGTGTGCAACGCGAAATTCTTCACACAATCTTTGCTGATGCGGCATATGATCTCACACAGTGATCAACGTAATTTTGCATGTCCGTACTGTGATGTTCGCTTCAAGACTAGTGACAATTGCAAGAATCACATTCTAACCCATGCCCGAAGTTTGCTAGCAAATCCCGACCCTACACCACCGCCGCCGCCGCCAGATGAATACATTATGATCCATCCTGACGAAACTTCACAAGAGCCTGCCGCTGTGAATTCCATAACTCAACAATATATTGCAGTTGTCGAGAACCCCCAGAAGAATCTCTCGCCAAAGTTCCTCCAACTGGAGCTGGTGAAAAATTGTAAAAAACATAAACACAAGAATTTGACTGTCGAAACAATGAAAACACCAAAAAAAACATCATCATCACCCACATCGACAGCGAAGAAATCGGCGAAACAGATCAATCAATCTGGGAGACACAATTGTAGTGAGTGTACTAAGATTTTCTTTAAAGCCAGCGATTTGGAGCGTCATATGAGAACTCATACAAAAGAAAAACCCTACCAGTGTAGTGTATGTTCCAGGCAGTTTGCCTTGATGTCCACTCTAGTGCATCATATGAAGACACATGATTCGGAAAGAGAGACTTTCGGCTGCCAGGTTTGTGGCAAGAAGTATACATCGCAGAAAGTCTTAAAAGTGCATTTGCGAATTCACACGGGCGAGAGGCCATTTCAGTGTGGGGTGTGTAAGAAGACATTCCGCACGTCGGGACACAAGATTGCGCATGTTAAGGCGCATCATAAGAAGAAAAGACTGAATTAA
Protein Sequence: MQNNTDLFTPLPVELSTPNGLLYQFNEEKFLKSHDFYAFEMDCFAVPEINDIPPPIVGLSPIPEETSCSLMVNPLEPLFSPAEPTISVAPVPTALPSSSSVHIIAPTNSTQDDQPVTVSAVKQLTCDLCLESFFSTQALRLHRRVQHIASKEFRCRKCPSSYNFESNLILHLASHVPSCSTNKQCPECKMVFKRISSFKGHLKTHLTNDRFKCNRCEKEFELKGYYEQHLANAHKPGADGIIEEILLKVVSRYFLIINLILKYIFANPQANNTKCRKSSKLVNGKYRCQYCEKKFTKPCLLKRHEVCHTGVKPFQCEQCDQGFTQKSSLERHMLLHQGVKDFKCPMCSYSFSQKNNLIVHIQRTHPINANNENMFACEFCTCLFTKLSSVNRHRAMVHPEKENTNGEHATDGGDDDDDDNVNVAKVMEQLKSFQESMKIMDIKVSALELSPLKPPSPGPVVHTVTIVDTLNTNKAKTFKKAKEIIYKEERTIACAYCDKPFKRQFDLLRHHRTHTKEKPFQCNVCIKSFSTKSGLKIHLNTHNSFEATPARAHECLVDECHKRFASLRALDFHTKTHTNSISYICPVCSKIFTSKAGFSSHKHHTKDQEFDSICKLLKSPVQIEPNIAEEAFKAEEYLRRSHQCFVCGLKMQKLSHLRQHEATHRGERQYQCEICFRCYTTQSSLNLHLKIHTAEKTHICQVCNAKFFTQSLLMRHMISHSDQRNFACPYCDVRFKTSDNCKNHILTHARSLLANPDPTPPPPPPDEYIMIHPDETSQEPAAVNSITQQYIAVVENPQKNLSPKFLQLELVKNCKKHKHKNLTVETMKTPKKTSSSPTSTAKKSAKQINQSGRHNCSECTKIFFKASDLERHMRTHTKEKPYQCSVCSRQFALMSTLVHHMKTHDSERETFGCQVCGKKYTSQKVLKVHLRIHTGERPFQCGVCKKTFRTSGHKIAHVKAHHKKKRLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00694013; iTF_00694863;
90% Identity: -
80% Identity: -