Basic Information

Transcription Factor Domain

TF Family: TEA
Domain: TEA domain
PFAM: PF01285
TF Group: Helix-turn-helix
Description: The TEA domain is a DNA-binding region of about 66 to 68 amino acids that has been named after the two proteins that originally defined the domain: TEF-1 and AbaA. The TEA domain is located toward the N terminus of eukaryotic transcription factors of the TEA/ATTS family. It shows a three-helix bundle with a homeodomain fold [3, 1]. Two α-helices are nearly anti-parallel and pack on either side of the third one, which is the DNA-recognition helix of the TEA domain. Phosphorylation of one or both of the two conserved serines found on the DNA-binding surface could interfere with DNA-binding activity, by introducing electrostatic repulsion and/or steric hindrance, and help regulate the transcription factor activity of the proteins [2, 1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 9.2e-11 1.5e-06 29.2 0.1 2 43 97 140 96 175 0.80

2 2 0.79 1.3e+04 -2.6 0.1 21 21 236 236 205 254 0.56

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	9.2e-11	1.5e-06	29.2	0.1	2	43	97	140	96	175	0.80
2	2	0.79	1.3e+04	-2.6	0.1	21	21	236	236	205	254	0.56

Coding Sequence: ATGTATGCTCAATTCGTATCTGCTGTGTCAAATTTACGACCTGATGTTATTGGATTTGATGGAATCGGACCTCTTTGCGGGGGTGACATTTTGGTGAAGCTTCCTATTTCGATTACATTAGACGGTATTGTAGGAGCCGGCGCCATAACGTCGCGGTGGACACCTGTAGGTGCCGGTCCCCCAGGTCCATTGGGACCGGCAGACACAAATGGCAGTATGGCGGATGCCAAAAATTTAGACGTCGGAGATATGAGTGACGACGAAAAAGATCTCTCATCAGCTGATGCCGAAGGTGTCTGGAGTCCTGATATCGAACAGAGTTTTCAAGAAGCCTTAACAATATACCCACCATGTGGACGAAGAAAAATCATTCTCTCCGACGAGGGAAAGATGTACGAGTCAGCAGAAAGAATCGTTCGCGTTGTCGGTGGAATTGCTGCGGTCTTCGTCGTCGTCGGTCGTGACAAGCGATCGCAAGTCATAAATCATCATCACCAGCAGCAGCGTTCACCAGTGCAAGCTGCTTGCTGGCTGGCGGATTGCTTGCTCGCTTCAGATTCAACGTCGTCGTCATCATCGTCGCATCGCGTCCCTCAATTTAAGCGAAGACTTAGTAGTATCCTGATGGCAGGCACGGCACACTGGCACAGGCAGAGTGAAGCAGCTTGTTACTGCAGTCGAATTGTCGGTCGGCAAAACATCGCACCGGCACAACATTCGAGTTCCAGGAGTAGGAAAAGGAGATGGAGACGTTTCCATCGTTTTGCTGCCCTGAGACAAAAGCTAAAGCCGGCAGTACTTTTGTTAGATGAAGGTGGGAAAGGATCACAATCTCTCAACAGCATAGAAGTTGACTTTGTTGAGGAGCGTTGA
Protein Sequence: MYAQFVSAVSNLRPDVIGFDGIGPLCGGDILVKLPISITLDGIVGAGAITSRWTPVGAGPPGPLGPADTNGSMADAKNLDVGDMSDDEKDLSSADAEGVWSPDIEQSFQEALTIYPPCGRRKIILSDEGKMYESAERIVRVVGGIAAVFVVVGRDKRSQVINHHHQQQRSPVQAACWLADCLLASDSTSSSSSSHRVPQFKRRLSSILMAGTAHWHRQSEAACYCSRIVGRQNIAPAQHSSSRSRKRRWRRFHRFAALRQKLKPAVLLLDEGGKGSQSLNSIEVDFVEER

Sequence clustering based on sequence similarity using MMseqs2