Basic Information

Gene Symbol
bdp1_1
Assembly
GCA_905146935.1
Location
LR989927.1:54003492-54005183[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.5e-08 5.5e-05 24.0 0.0 2 44 452 494 451 495 0.95

Sequence Information

Coding Sequence
ATGTCGACGCGACGGCCTAGAATCAAGGCCGCTGCCAACTTGGCTTTAGCTTCAAAACGAAAACCTAAAACCAGCACCCCGACTGGGGCAGACTTAGTGAAGCCCAAAGAAGAGCCGTCGGATATTAAGAGTGAGTCAGCCGAAGTAAAACAAGAACACACTTTATCGAGCGTCACTGTGACTGTAGATGAGAAAATTGTAGACGATGTTCCAATTCCAACTAAGAGACCAGTCAGTGGTAATGAGAGTCATCCTCTTGAGAATCAATCAAGTCTCGATGAAAATCAACTTCTTGAAGCAGTTCTTTCGTCCGATATTTTAGATACTGTCCAAATTGCACCTGTCACAGAGTGTTCAACAACTGCAAAAAGCGATGTACACGTCACAGAGCCGACACCCTCACCCTTTACTCATGAGAACGTTACTCATCCTACTACATCCGATAAGTACTCATTTTCATCTAAAACCTTAGATAATCTACCAACGGAACCTTTAATTGTGGAAAGTCCAGAAATTATACAAAACACATCCGGCAAAACTCTACAAAGCTTTGAAGATGCTTTTAAATATCCCTTTAACCCAGACTACAAACGCTCATCGGCAGTTGTTCCTCCGGTTGAAGAGAATAATGTCTCCGACTTGGAAGACAATATTCTGCACATGGATTTACAAAAATCACCTGGGTTCCCAATGTCTCCTACAAAAGCTCGACAAAGAATACGACCCACACCGATTTTTGGTCAAAGACGTAATAGTTTTGTGGGAACAAGTCCCTCGCCACACACTGAGGATGACTCAAGCGGAACAACACGCCAGAGAAGCTCAAACAGTACATCATCGGATATTTCAGGAAATTTCTTAATGAGGAAACTAGCTGCCGGAAATCTAGGACGAATACGCACTGAATCGGGTTGCTCAACAATATCCGAATCACGAGGATCTTCACGCAGAAATGCCACCGATGAACAAAACAAATCATTGAAGAAAGAATTCCAAATGCGTTTCAATGGTGGAGTTCCAGATAAGTCAACATTGAAAATGTTCGATCTGATTTACTATAATCCACTAACAAATCCCATGGAAAAAAGACCAACTGGTGCAGCACAAGTTAGTGAAAAATCACCAGGAGAAGTTACTGGATCGGAACCAAATCCGGCAAGTGCCACAGAATCGGCTATGCCAGTGCCTCAATTGAAACTTGGTTCCAATGGAGAACTTATGATCGATGAAATGAGTTTGGAAATCGAGACAACTGCTGAAGTGGAGGCAAGAAAAGTTCTTGCTAACACTAGTCTGATATATCATGACGAGAATACTGGTGGTGAGGGTTTCTATAAGCGAACGAAACGCACAAAGGACTGGTCACCTGATGAGACAATCAAATTTTATAGGTGTTTGCAAACTGTGGGAACGGATTTCTCGTTAATGTTAACTCTATTTCCGAATCGTAAGAGAAGAGATCTAAAACTGAAATTTAAGAAAGAAGAACGTTGTAATTTGAACTTGATCAATAAAGCTCTACTGTACCCGGGGACATTTAATATTGAGGATTTAAAGGAACAATTGGACGCCGAAGATAAGGAACGACTTGAACAGGAACGGTTATGGAAAGAAATCAAGGCAAAGGAGGCCAAGAAAAAGAAGAAGGTAATCATTTTTGAAAATGTTTGTAAATTTAACTTAATTATTTAA
Protein Sequence
MSTRRPRIKAAANLALASKRKPKTSTPTGADLVKPKEEPSDIKSESAEVKQEHTLSSVTVTVDEKIVDDVPIPTKRPVSGNESHPLENQSSLDENQLLEAVLSSDILDTVQIAPVTECSTTAKSDVHVTEPTPSPFTHENVTHPTTSDKYSFSSKTLDNLPTEPLIVESPEIIQNTSGKTLQSFEDAFKYPFNPDYKRSSAVVPPVEENNVSDLEDNILHMDLQKSPGFPMSPTKARQRIRPTPIFGQRRNSFVGTSPSPHTEDDSSGTTRQRSSNSTSSDISGNFLMRKLAAGNLGRIRTESGCSTISESRGSSRRNATDEQNKSLKKEFQMRFNGGVPDKSTLKMFDLIYYNPLTNPMEKRPTGAAQVSEKSPGEVTGSEPNPASATESAMPVPQLKLGSNGELMIDEMSLEIETTAEVEARKVLANTSLIYHDENTGGEGFYKRTKRTKDWSPDETIKFYRCLQTVGTDFSLMLTLFPNRKRRDLKLKFKKEERCNLNLINKALLYPGTFNIEDLKEQLDAEDKERLEQERLWKEIKAKEAKKKKKVIIFENVCKFNLII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-