Spyr002187.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- -
- Assembly
- GCA_905146935.1
- Location
- LR989929.1:20766279-20767397[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.5e-12 3.2e-09 37.2 0.1 4 40 111 148 109 153 0.89 2 3 8.8 1.1e+04 -3.0 0.0 23 34 177 188 172 193 0.66 3 3 3.3e-11 4.3e-08 33.5 0.0 5 39 222 256 219 261 0.92
Sequence Information
- Coding Sequence
- ATGGAAGTTTCTGTATCAAGGGAAGATTTCGTGTTGCCTAAACAACTGGATCCACCAGAACTGTCAGGAAATGATCATTACGTTATATACGAATTAAAAAACGACAATCAACCGTGTTATAGCTACTTAGTCAGAAATCCCAAAGAACCACCACCTGACTGCCTTGGCCAAATGGATGATACAACTTGCGATAGCATTGTTTCCACGGTAACCGAGATAATAGGAAATCCAGGACCGTTCACAATCAGTGTTGAATTACCAGTGCAAAATCATCAAATAGAACTTTGTAAGGAGAACTCTCCGAAAACAAAGCGGGCTCTTGCACGTAAAAGACTCGCTCAAGCAGTTGCAGCTGTGGTCAGTGAAGAAATGACTATTGGTAAAGCTGCCAAGGAATTTGAAGTGACAAAAAGTACCCTCTGGAAAGAAGTTAATAAACAAACTGACCATCGAAAAAAGAAAATCGATGAGGATCTTAATAAGAAGATCGTTGATCGCATTTGTGCAGGTGAATCTCTGTCGGAGATTTCTAGATCTCTAAATGTTTCCAAATCAACAGTACACCTACATAAAGTTCGACTTGCCCAAGCGGGTCGACTTCCAGCGAGTGTTACGTTCAAACCGCCTGTTGACAAAATGGAGCAAATTGCCATCAAGCAGCGTATAATTCGAGCCTTTCGTGCAGTCCGAGTGAATGGCATGTCGTTGCGTTTAGCATCAACGTTTTTCTCGGTGCCACGATCGACACTATGGAAACACATACGACGATGTAAAGCTTCGCAAAAGAAACAAGAGAACGCAGCACAACATTTTACTGATTCGGAAAAGTCGTCTATGAAGGAGAAAATCAAGGAATTGATTTCAGAAGAAACTAGTGAGAACGAGGATAGTGCAGAAGATGACAGTAGTTCTTATGAAGCGGAAGATGAAGAAGTTTCTGTAACAGATGAAAATACAACGGATGTTCAATCCACGACAACTGCGGAGGAAATTCAAGAAGACTTTGATTTACTGGATTTTTATTGTGAGCAAAATAATCCCAGTGAAGAAGGAGACTTTCTGATAAGTTTTGATTTTAAGACTTTTGAAGATTATGTTAAGACTGATTTAAAAAAATAA
- Protein Sequence
- MEVSVSREDFVLPKQLDPPELSGNDHYVIYELKNDNQPCYSYLVRNPKEPPPDCLGQMDDTTCDSIVSTVTEIIGNPGPFTISVELPVQNHQIELCKENSPKTKRALARKRLAQAVAAVVSEEMTIGKAAKEFEVTKSTLWKEVNKQTDHRKKKIDEDLNKKIVDRICAGESLSEISRSLNVSKSTVHLHKVRLAQAGRLPASVTFKPPVDKMEQIAIKQRIIRAFRAVRVNGMSLRLASTFFSVPRSTLWKHIRRCKASQKKQENAAQHFTDSEKSSMKEKIKELISEETSENEDSAEDDSSSYEAEDEEVSVTDENTTDVQSTTTAEEIQEDFDLLDFYCEQNNPSEEGDFLISFDFKTFEDYVKTDLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -