Spyr025958.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- -
- Assembly
- GCA_905146935.1
- Location
- LR989928.1:27811209-27824443[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 8.2e-11 1.1e-07 32.3 0.0 1 38 502 540 502 545 0.89 2 4 2.6e-13 3.3e-10 40.3 0.1 2 39 557 594 556 597 0.94 3 4 7.8e-18 1e-14 54.8 0.0 1 45 611 656 611 656 0.98 4 4 1.8e-19 2.3e-16 60.0 0.0 1 44 663 707 663 708 0.96
Sequence Information
- Coding Sequence
- ATGACAGCGGGTCTTCTGCGGACCGCTGAGCAGTTAAAAATAAAAGGGCTTTGCGAAACGGCCGAAAGTGTTGATGAGGCAGAAGCAGCAACGGCCACCATCACATTATCAGAAAATATAACGCAAACGGTTGTTGGAAATATTGTGAACTCATCACAGGGTAATGAAATAGTCACTACACACACAATTGAAAACAACACAAATACGCATACAACAACAGCAAATCTACAAAGTAATAACAATAATATTAATTCAAGTATTAATGCAATAGTTGGTACCCCAACGGCCACATCGACCCCTCAACTGCGAAAATCACGGGTCAGAAAACGTTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGTAATTATATACCGGTTTCGGGAGGCCAGACGATAACGACGACAGCTGTTAGCCAACACAGCCCTGAGGATTCGAATCCGGATAAGCCAAGTGCTCAGAAAATCTGCAAAACTGAATCAGCAAGCTCACCGACATCGAATAATGGCAGTGTAACTGTTGCACCAGGAACAGCCATTGTAACACAAATCGTTGTAGCCCAAAACGTTAAGGACAATAAGAACATGACCAGTATAGGAATGGGAATGAACGGCGGTCTCCTCGGAGTACCAATGGGCTTTTTAGATTTTGCACCCGAACCACCAGCACCATCGGCAACACCTGTAACAGTGACGGAGCACGTAGACTTGTCGTGTAATCCAAGTCAGGACACCAGAGATTTATCAAATCCCACCGAAGCGCTCGACATTGACAATCATTTAGCACAACATATGATCCAACGGCTTGATCAATCACCGATGCATACAATCCACCATCAGTCGTCGACTGGCGATGAGAGTAATTCAAATTTAATTCAGCATATTAAGAGTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTATGGAAATTGATCCTAGCAATATCAAACACGAACCAGGGATGATTATCACGCCGGAAATTGTTACAATGATGGCAACGGGTCATATGGATATATACTCAGATGCCAGTGAGGATTCGTTGATGATTGCGAATGGTTCCCCAAATGACAATAACGAGCCACACTATACAAATTTGGACCAACAACAAGATATCAAAGGTCAGTTTAATGGTCCCAAAACTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAATATGAGTTTGACGAAAGCCTCAGTGACGTATGGCATCCCATCGACAACATTGTGGCAACGTGCCCATCGAATGGGCATCGAAACACCCAAAAAAGAAGGCGGTACCAAATCATGGAATGAAGATTCATTAAACAGCGCACTTGAGGCACTAAGAACTGGTCAAATATCAGCTAATAAAGCCTCGAAGGCGTATGGTATTCCGTCCTCGACATTATATAAGATTGCCCGACGTGAGGGTATAAGATTGGCAGCACCATTTAATGCAGCACCAACAACATGGACACCCGAAGACTTGGAACGTGCATTGGAAGCAATTCGTGCTGGTCATACGTCCGTCCAAAAGGCTAGCTCCGAATTTGGTATACCAACAGGCACACTATATGGTCGCTGTAAGCGAGAAGGTATTGAACTATCCCGCTCCAATCCAACACCTTGGTCAGAAGATGCAATGAATGAAGCATTAAATTCTGTTAGAGTGGGACAAATGTCCATTAATCAGGCGGCTATTCACTATAACCTTCCATATAGTTCCCTGTATGGCCGTTTTAAACGTGGCAAATATGATATATCCAATACGAGTGCAACAACAATCAACAACACATCAGGTAACACAAGCGGAAGCATTGAAATAATCGAACATAGTCCAGAGAATTCGGTTCACACCCAAGCTGGACAAATCCAACATATATATCACAGCACCCCTGAGAGGAGTTGA
- Protein Sequence
- MTAGLLRTAEQLKIKGLCETAESVDEAEAATATITLSENITQTVVGNIVNSSQGNEIVTTHTIENNTNTHTTTANLQSNNNNINSSINAIVGTPTATSTPQLRKSRVRKRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNYIPVSGGQTITTTAVSQHSPEDSNPDKPSAQKICKTESASSPTSNNGSVTVAPGTAIVTQIVVAQNVKDNKNMTSIGMGMNGGLLGVPMGFLDFAPEPPAPSATPVTVTEHVDLSCNPSQDTRDLSNPTEALDIDNHLAQHMIQRLDQSPMHTIHHQSSTGDESNSNLIQHIKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVMEIDPSNIKHEPGMIITPEIVTMMATGHMDIYSDASEDSLMIANGSPNDNNEPHYTNLDQQQDIKGQFNGPKTWTQDDMNSALDALKNQNMSLTKASVTYGIPSTTLWQRAHRMGIETPKKEGGTKSWNEDSLNSALEALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGHTSVQKASSEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDISNTSATTINNTSGNTSGSIEIIEHSPENSVHTQAGQIQHIYHSTPERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -