Spyr026422.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- retn
- Assembly
- GCA_905146935.1
- Location
- LR989928.1:33208781-33231894[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.25 1.2e+03 0.8 0.0 41 65 92 117 86 130 0.75 2 2 1.3e-20 6.1e-17 62.6 0.0 2 79 260 335 259 336 0.93
Sequence Information
- Coding Sequence
- ATGGAATCGAAAGGGGAGAGAATGCGTTCGTCAAATTGGGATTCCTACGATAAGTCGAACGACGAACACTCTGAGGACGACATGAGAGACTGCGAATCAATGGATGACGAAAACACCAGTCGATTAAACGCCTCTATGGTCAATGGAATAAACATGGACTATGTAGGACTCGGAGGTGGTAGGAGCCCCGACCAACAACATAATACAGAAATTTCAATGAGTCATCATGGACAATTCGGAGGGAATCATCCGCTGGGTGCGCTGGGAAACTTCATGAGTATGGGAGGCCTGCACAGTATACCGAACCTGCAGCAACAGCACAACGATGTGTTGGAGAAACTGAAAATGCAAGTCCGCGACATGAAAGTGGGCCTTATGGATCAAGAGTACCCATCACATAGTAACTTCGGCTCAAATGTCATTCCAACACCCATAAATACGGCGTTCACAATCCCACCAACTTCACACAACACATTCGGCCACTCCCCGCAGAACTTATCGCAGCAGTCACCACAGCCACAGCAATCCAGCTTGCTGTCATCGGCGCAACAGCAGCAACATTCGCAACAATCTCAATCACAAACAAGTTCCCAATCGATGTCAAATGGTTTCGCGTTCACCTCACCCTCAGCACCAAGCACAAAAGATGTCAATCCAGCGTCTAACTCATCGACCTCCAGTGAAACATCTAACTCCTCACAACAGAACAACGGCTGGAGTTTCGAGGAACAGTACAAACAAGTGCGACAGCTCTATGAAATCAATGATGACCCTAAACGCAAGGAGTTCCTTGATGACTTGTTTTCATTCATGCAAAAGCGAGGTTCACCCATTAATCGTTTACCAATCATGGCAAAATCAGTTCTTGATCTGTACGAGCTCTACAACTTGGTCATTGCTCGGGGTGGCCTCGTCGATGTGATCAACAAAAAGCTGTGGCAGGAGATCATCAAAGGCTTACATTTGCCATCGAGCATAACGAGTGCAGCGTTTACATTGCGCACACAGTAA
- Protein Sequence
- MESKGERMRSSNWDSYDKSNDEHSEDDMRDCESMDDENTSRLNASMVNGINMDYVGLGGGRSPDQQHNTEISMSHHGQFGGNHPLGALGNFMSMGGLHSIPNLQQQHNDVLEKLKMQVRDMKVGLMDQEYPSHSNFGSNVIPTPINTAFTIPPTSHNTFGHSPQNLSQQSPQPQQSSLLSSAQQQQHSQQSQSQTSSQSMSNGFAFTSPSAPSTKDVNPASNSSTSSETSNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGSPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00694378;
- 90% Identity
- iTF_00694378;
- 80% Identity
- -