Spyr002429.1
Basic Information
- Insect
- Scaeva pyrastri
- Gene Symbol
- Runx1
- Assembly
- GCA_905146935.1
- Location
- LR989929.1:23167922-23172324[+]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.8 9.6e+03 -3.0 1.4 49 66 17 34 11 52 0.52 2 2 1.9e-51 1e-47 161.8 0.0 4 101 72 169 69 177 0.93
Sequence Information
- Coding Sequence
- ATGCATATTTCAAGTGAAGTTAGTTCAACAACGTCACAAACGCAACAAGATGGAAGTCGTGCAAGTCGCAGCAATGCCAACAACAACAATAACAGTAGTAATAATTCGAGTTCTAGAAACAACAACAACAACAATAGTGTAGCGAATAAAAAAAGTGTTGACAATAGTCCGTATTTGACGCCAGAAAATTTAATTGAAAGGACCGTTGATGGACTGCTGGCGGAGCATCCTGGAGAACTTGTTAAAACTGGATCACCTCATGTTGTTTGCACCGTACTACCAACCCATTGGCGTTCCAATAAAACCCTACCGATTGCCTTCAAAGTTCTAGCCCTGGGTGATGTCATGGATGGAACAATAGTAACGATACGTGCTGGCAATGATGAGAATTTTTGTGGTGAACTTCGAAATTGTACAGCGGTGATGAAAAATCAAGTTGCCAAATTTAATGATTTACGATTTGTTGGACGAAGTGGTCGAGACGATTATGCCCCGATGATAATAATGGCGATAATGATTCCAGACAAAACTGGGGATTAA
- Protein Sequence
- MHISSEVSSTTSQTQQDGSRASRSNANNNNNSSNNSSSRNNNNNNSVANKKSVDNSPYLTPENLIERTVDGLLAEHPGELVKTGSPHVVCTVLPTHWRSNKTLPIAFKVLALGDVMDGTIVTIRAGNDENFCGELRNCTAVMKNQVAKFNDLRFVGRSGRDDYAPMIIMAIMIPDKTGD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00426893;
- 90% Identity
- iTF_00426893;
- 80% Identity
- -