Basic Information

Gene Symbol
gata5-b_1
Assembly
GCA_947532125.1
Location
OX383898.1:227189-231008[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-16 3e-13 49.4 3.3 1 35 484 517 484 518 0.97
2 2 6.8e-18 1.9e-14 53.3 6.7 1 35 545 578 545 579 0.97

Sequence Information

Coding Sequence
ATGGAGAACGTGAATCAAATGGTGCACAGAAATAACGAGGAGCAGCGAGAGGAAGAATGCGCTGTGGAGGCTCTACAACTCGTTAAAAATGAGGATAGGTTAGATATGGAGAGGGCCACCGAGGCGAGTAACGAGGGGGGCGTGAGCGGAGCGGGGGAGGGCCACCCCCCACACGAGCACTCACCGCAGCCGCACTCTCAGTCTGTGATCACATCACGTCGCGCCGTGCGCACCATCACCGCCGCCGGACATATTACGACCGACGAGACTGGAGAGCTCGCTGACGAGGGCGTCAAAGACGAACCACCCGAACAGCCACAGCTCGAACATGAACAGCAACAGATGCAACAGTACGCGCCCAAACTAGAGGAGTCGGGGGGGACGGGGGATCCACGCGACTCCCACCACCAGCACTACGACGAGGAGCGATTGCGATTAGTCGAAGCTGAAACGGCGCGCTACCTTGCCTTCAAACAAGACCCGTACCGTGCGTCCCAGTCCGCACTACCCGCGCAACCATCCCTCCTACCGCAGGACAAGCGGGCACAGTCACAGCCGCAGTATGCACGTGCGCCGCAGCGGAGCGGGTACGGGCGCGGGCTGGCGCTGCGTTACGGCACGCCTCACCATGTAATCGTGGCGCAGGAGGGTGAGCCTGATGAACACGCGCATGATACGTTCCTCGCGCATAAGGACAAGCAGGAGGTGCAGGCGTACGCGCCGGCAGAGAGCGCGGCGGACGGGCGTCAGTACGCGGCCGCGCTAGCAGACCAGGCAGCCGCCTCCACTGCGCTCGAGATGATCCAGACGACGTCGCTGAACAACCAGCAGGCGGTTGGCGTAGCCTATCAGCAGGTCAAGTACGAGACGCGTGCAGATGGCGAACCACGCCCGAGCACATACGCGAGCCTGCAGCCCGTCACCTCGGTGCATGGCGGCTATGCGTACGCCAGCCAGAGCCCTCAGTACGGCGCCGCGAGCTACGGATCATATGGTGGCGGCAAGGAGCTGCTTACGCTGTACGGGGGCACGGTGGGCGGCGCCAGCTCCAGTGCTGGTGGTGCGGGTCGCGGCGACGAGTCCCCGCCGGGCCAGCTACTGTATCGCAGCGACCCCACGCTATCGTCGTCATCGCTGACGGCGCGCGGCGCGCACGTCGTGTACGGTTCCGTGGTGCCTCAGTCTCAGGCCGTATACGAGGCTCCGCCCAGCCCCAACTCACAGCAAGTGACGTTGTACACGCACGGCAACACGGTGCAGTACAAGGTGGGTGGCGAGCACTATCTCGGGCAGGGTGGCGGCGTTGAGTACGTGCCCGTGTCCGGATACGAGGGCGGGCTGCTCGTCGAGGGCTACCCGGCACCGGCGCAGGCGTGGCCGACGCACAACCTGTTGCCTATCGACGATGGCTTTGACCCAGGTATGGCGGGGATGGGCGAGGTGAAGGAGTGCGTGAACTGTGCGGCGGCCACCACCCCGCTGTGGCGACGGGACGGCACAGGCCACTACCTGTGCAACGCGTGCGGCCTCTACACGCGTATCAATGGCGTCAACCGACCACCGCTCAAGGGACAGAAAGCGAAACCACAACAGGCCTTGCCGACGAACGGGAACCGGCGCGTGGGAGTCACGTGCGCCAACTGCCGCACCTCGAACACGACGCTCTGGCGAAGAAACAACAACGGGGAGCCCGTCTGCAACGCATGCGGACTGTACTTCAAGCTGCACAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACTCGCAAGCGCAAGCCCAAGAGCATGGGCGGAGGACACGTCGGACGGCCGGGCGCGCCGCCCGCCCTCTCCGTAGAGGCACACTCGCACAAGGTACTGCCTCCGCTGTACGCGGCGGTGGAGGCGGCTGCGGGGGCTGCGGGAGCCGCGGGTAGTGCGGGGGGCGCGCCACTGCTGCTGCTGCCCGCCCTCAGACATCAAGCCGATATGGGACCGTCACTAGAGCGGAGTAGCTCGTCGGTTGCGCCCGCGCACAGTTCGCAGTCGCACTACCGACCGCCATAA
Protein Sequence
MENVNQMVHRNNEEQREEECAVEALQLVKNEDRLDMERATEASNEGGVSGAGEGHPPHEHSPQPHSQSVITSRRAVRTITAAGHITTDETGELADEGVKDEPPEQPQLEHEQQQMQQYAPKLEESGGTGDPRDSHHQHYDEERLRLVEAETARYLAFKQDPYRASQSALPAQPSLLPQDKRAQSQPQYARAPQRSGYGRGLALRYGTPHHVIVAQEGEPDEHAHDTFLAHKDKQEVQAYAPAESAADGRQYAAALADQAAASTALEMIQTTSLNNQQAVGVAYQQVKYETRADGEPRPSTYASLQPVTSVHGGYAYASQSPQYGAASYGSYGGGKELLTLYGGTVGGASSSAGGAGRGDESPPGQLLYRSDPTLSSSSLTARGAHVVYGSVVPQSQAVYEAPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYPAPAQAWPTHNLLPIDDGFDPGMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYFKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHVGRPGAPPALSVEAHSHKVLPPLYAAVEAAAGAAGAAGSAGGAPLLLLPALRHQADMGPSLERSSSSVAPAHSSQSHYRPP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01316946;
80% Identity
-