Spav010306.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- zfy1
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:2638128-2645855[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0077 0.43 11.4 0.6 6 23 173 190 171 190 0.93 2 12 0.0045 0.25 12.2 2.7 1 23 207 230 207 230 0.95 3 12 0.021 1.1 10.1 0.3 7 23 242 259 242 259 0.93 4 12 0.0035 0.19 12.5 5.6 1 23 307 330 307 330 0.98 5 12 0.00023 0.013 16.2 0.8 6 23 341 359 339 359 0.95 6 12 0.00011 0.006 17.3 5.5 1 23 370 393 370 393 0.98 7 12 0.067 3.7 8.5 0.1 6 23 404 422 404 422 0.97 8 12 0.00014 0.0075 16.9 2.7 1 23 434 457 434 457 0.98 9 12 2.1 1.2e+02 3.7 1.9 6 23 468 486 466 486 0.91 10 12 3.2e-05 0.0018 18.9 5.7 1 23 499 522 499 522 0.98 11 12 2.2e-05 0.0012 19.4 2.3 1 23 563 586 563 587 0.97 12 12 0.3 17 6.4 0.2 5 23 596 615 594 615 0.92
Sequence Information
- Coding Sequence
- ATGGATTGCAAGGAACATCTAGCAGCCAGCTGCGATACATTGAGTACCACAGCCCCAGAGGTACGGTGGAATCTGCAGATGTGTACAGCAATGGTGAAACAAGAAACCGTAGACTTCATAGATGAGGAAGAACCACCTTGCAGTGAGGATATGTATCCAGCTGAGCACATTCAGTCATCAAAGTATGTAAATTACTATGACAGTAAGGATTGTGAGTTGAAACAACTGAAGGAGGAATTCCCTGAGGATGAATGTCTTCAATCACACATCAGTATGATTAGTAAACTAGTTCCCCAAAATAACATATTATTAAAACTTATAGACAACCAAGAAGTTAAACATGAAAAAACGGAGGAGGGATTCCCATTAAAAATAAAGGAAGAAAAAGACAATAAAAATGACCAGGTAACCGTAAAAACGGAGAGGCTAGATGAGCAAGATATATTGGATGCTGCTGTAGCCACTATCATACAAAATGATGTGCTGGTGACTCATCAAGAAGTTCAAGGCAAGTCGTGTGGTAGAATATTCAAAAATAGTTTTAATTTATTAAAGCACAATCAAGAACACGTAAAAGTTCAAATAATTAAACCAGGTGTTAATGAAATCAATGAACTACACCAGTGCCAATATTGTGACACATATTTCGATAACCATGATAATATGCTTATGCACATCAGCCTTGTTCACTACCAGAAAACTTCTAAATGTAGATTATTTGGTGGGAAGCAATTCAAGAGCGCGTCGAATCTTAAACGTCACAACCAAATTTTACACAAATATAAGAATTCTACAAAGCAAGTAACTGGAAAAAGTAGGAAATGTAAATATTGCAATGTATATTTCGAACCCAGATATACTACGTTGTGTAAACATATGGAGCACTGTCGTACTAGTAAGCAGGATGAGGGAATTAAATACAAATGTGATTCTTGCGATTGCGTTTGTTCGAGCAAAAAGACATTATCAGTGCATATAAAAAGGACTCACATTGACTATGGAAGAATATTTGATTGTTGGTGCGGAGAGTCATTTCGTACGCCGATACATTTGAATGAACACATGAGATTACGACATTGTATTAAGAGGAAATATAAAACAGAAGTTTATAAATGTAAAAGATGCAAGCGATTCTATAAAACTAACCAGAGTTTGACGAAGCATATAAAGAGAATGCACTATGAATACGGTAGGAAATTTGATTGTTGCTGTGGGAAACAGTTCCGTTCACCGATACAATTGGACGAGCACGAGAAACGGCAGCACGTTCACGAGATTCAAAACACTAATAAAGACAAATTTCAATGTGACATGTGTCAAAACTTTTTCAAATACAAAAGTTCATTAGTTACACATATAAAGAGAAATCATACCGATTATAATAAAGTATTTGACTGTTGGTGCGGGGGACATTTCCTAACACCGATGCACTTAGCCGAGCACATGAGACGTAAGCACAATCGCAAGATTCAAAATACAAAAAATATAGACAAATTTCAATGTGACATGTGTAAGAAGTTTTTCACATACAAAAGTTCATTAGTTACACATATAAAGAGATGTCATACTGATTATGATAAGGTATTTGAATGTTGGTGCGGGGAACTTTTCCTAACACCGATACACTTAGTCGAGCACGAGAGACTGCAGCACAACCGCGAGTTAAAGAATTCAAATAAAAAAAAATACCAATGTGACATGTGTCAAAAGTTTTTCATTTATAAAAATTCTTTAGTTATACATATAAGGAGAATTCATCATGATTATGATAAATTATTTGAATGTTGGTGCGGGGAAAAGTTCCGTTCGCCGTTACAGTTGGACATACACAAGAAGGCGAAACATGTGTTTGAACACGATGGTTTCAAATTTGTTTTTTCATCTTAA
- Protein Sequence
- MDCKEHLAASCDTLSTTAPEVRWNLQMCTAMVKQETVDFIDEEEPPCSEDMYPAEHIQSSKYVNYYDSKDCELKQLKEEFPEDECLQSHISMISKLVPQNNILLKLIDNQEVKHEKTEEGFPLKIKEEKDNKNDQVTVKTERLDEQDILDAAVATIIQNDVLVTHQEVQGKSCGRIFKNSFNLLKHNQEHVKVQIIKPGVNEINELHQCQYCDTYFDNHDNMLMHISLVHYQKTSKCRLFGGKQFKSASNLKRHNQILHKYKNSTKQVTGKSRKCKYCNVYFEPRYTTLCKHMEHCRTSKQDEGIKYKCDSCDCVCSSKKTLSVHIKRTHIDYGRIFDCWCGESFRTPIHLNEHMRLRHCIKRKYKTEVYKCKRCKRFYKTNQSLTKHIKRMHYEYGRKFDCCCGKQFRSPIQLDEHEKRQHVHEIQNTNKDKFQCDMCQNFFKYKSSLVTHIKRNHTDYNKVFDCWCGGHFLTPMHLAEHMRRKHNRKIQNTKNIDKFQCDMCKKFFTYKSSLVTHIKRCHTDYDKVFECWCGELFLTPIHLVEHERLQHNRELKNSNKKKYQCDMCQKFFIYKNSLVIHIRRIHHDYDKLFECWCGEKFRSPLQLDIHKKAKHVFEHDGFKFVFSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -