Spav000815.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- zfy1
- Assembly
- GCA_947532125.1
- Location
- OX383912.1:9787823-9803867[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.038 2.1 9.3 6.5 1 23 78 101 78 101 0.96 2 11 0.75 41 5.2 0.8 2 23 109 131 108 131 0.95 3 11 5.6e-06 0.00031 21.3 0.3 1 20 136 155 136 157 0.95 4 11 3.6e-07 2e-05 25.1 0.2 1 23 168 191 168 191 0.97 5 11 0.00029 0.016 15.9 0.8 1 23 228 250 228 250 0.98 6 11 0.0019 0.1 13.4 0.2 1 23 255 277 255 277 0.98 7 11 5.7e-05 0.0031 18.1 3.7 1 23 283 305 283 305 0.98 8 11 3.1e-05 0.0017 19.0 1.7 2 23 309 330 309 330 0.97 9 11 7.7 4.2e+02 2.0 0.2 8 23 348 363 337 363 0.74 10 11 0.00017 0.0092 16.7 0.7 1 23 369 391 369 391 0.98 11 11 2.9 1.6e+02 3.3 0.7 3 23 399 421 398 422 0.74
Sequence Information
- Coding Sequence
- ATGCCACCTAAGCGTAAAAAACTTGGACGACCACCGGGATCCAAGAACAAGAAAAAGGATACAATTACTGGTATAAAAATGATTCCCAAAGATACTCCGTCTACGCTAGATACTACTAATGTTTGCATTACCTGCTGCAAGTCTTTTGACCAGCAAGAATATGTAAACCATATCAAAGTATGCATTAAAAATGAAGAAGATAATATTATTTCAGAAAATCGTAAGCGACTGTTTTGTTGTAAACAATGTTCAAAATATTTTAAATTTGAGCATAGTTTGTCTGAGCATATTCTAAAGGAACATTCAGAATTACCTAACAGTGTACCCTGTTCGCAATGCTCAGTCAAATGTCCAAATAAGAAAATACTGAAAGAACATATATTGAAAGTGCATGATAGGGATTTGTTTGAATGTCCTGAATGTAATAAGGAATTTGTGAGAAGATCTCACGTATTGAGGCATATGGCTCAAAGTGGCTGCAATGGAAAGACTGTTGTCTTGTATCCTTGTGAAATATGTGATGCAAAGTTTTCCAGAAAAGATAATTTGATGGTTCACCTTCGCATACAACACATAAATAGAAATAATTATTTTGGATGCAAGAGTTGTGATTTTCTTACAAAAAACTTTTCCAAGCTGGTGAACCACTGGCACAGGAATCATTCAGAAACACCAGGCCAGTATGAATGCCATCATTGCGGGAAATCAACAGGCTCTAGAGCAGCGATTGCTAAACATTTGGAAATACACGGAGAGAAGAAATATTCCTGTGATGTGTGCGGATACAGTACGTACACTATAGAGGTGATGCGTCGACACATCCTGACCCACGTGGACGAGAAGCCTTTCAAATGCACAATCTGCAACCATTCGTATATTCAGCGTCTTCAGCTGCAGAAGCACATGGAGAAGCATACCGGGAACGTATGCACGAAGTGTGATAAGACTTTTTCATCTAGAACAAGATTGATTTTGCATCAAAGGGAACACATGGGATTGGCCAAAATGGTTTGTCCTTTTGAAAACTGTCCATCAAATAAAAAAGAATTTTTGAACGAAACCAGTTTTGAAACCCATTTAAAGACACACTTAGGACAAAAAAGTTTCCCGTGCGAGGTGTGCGGCAAGCAGTTCCATGTAGAGATGAACATGCGCCGGCACTTGGCGACGCACACTCTGGACCGGCCGCGGCGCTGCATGTACTGCGTGACGGCGCGCGCGTACGGCCGCGGCGAGCAGCTCGTGCGACACGTGCGCAAACACCACCCGGCCGTGTTCCGCGCACACCTGCAACACGTGCGCACTGTCCTCGGAACGAGTCCTGATGTGGAACGTGTGAAAAAATCTGAAATAGATTCAATTTTGAATGTCCTGGATGCCGAATCTGAACGTATAATGGAAAGTTATGGCGGATCGGGCGTTCTTTATGGAGGCATGCAAGAGAACAACGATGAAACACTTAAGGATGAAACTGGTCCGTTGATGACTGAAGAAGAACTTTCTAAAAACTTGGGAAAATTACTTTCGAAACTAATTGACACAGAGACTTTGGAATGCTTTGGATGGCCAGATGAGAGTGTTGATATGGTTTTAGAGAAAGTTATAGAGCACTGTGGCACTCGACCGGCTGATCGTGATATGTGGACACGTATGCAATGCCTGCGGGAGAATGCCAAACATTTGTTTCTACATGTCATAGAGGATAAAACTATCGCCCGTATGCTCGAGACTCACACCATTGATCAAATTATCAAAAACATTCTCAACAAAGTCAGTGAGGATGACACTTAA
- Protein Sequence
- MPPKRKKLGRPPGSKNKKKDTITGIKMIPKDTPSTLDTTNVCITCCKSFDQQEYVNHIKVCIKNEEDNIISENRKRLFCCKQCSKYFKFEHSLSEHILKEHSELPNSVPCSQCSVKCPNKKILKEHILKVHDRDLFECPECNKEFVRRSHVLRHMAQSGCNGKTVVLYPCEICDAKFSRKDNLMVHLRIQHINRNNYFGCKSCDFLTKNFSKLVNHWHRNHSETPGQYECHHCGKSTGSRAAIAKHLEIHGEKKYSCDVCGYSTYTIEVMRRHILTHVDEKPFKCTICNHSYIQRLQLQKHMEKHTGNVCTKCDKTFSSRTRLILHQREHMGLAKMVCPFENCPSNKKEFLNETSFETHLKTHLGQKSFPCEVCGKQFHVEMNMRRHLATHTLDRPRRCMYCVTARAYGRGEQLVRHVRKHHPAVFRAHLQHVRTVLGTSPDVERVKKSEIDSILNVLDAESERIMESYGGSGVLYGGMQENNDETLKDETGPLMTEEELSKNLGKLLSKLIDTETLECFGWPDESVDMVLEKVIEHCGTRPADRDMWTRMQCLRENAKHLFLHVIEDKTIARMLETHTIDQIIKNILNKVSEDDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00112742;
- 90% Identity
- iTF_01312447;
- 80% Identity
- -