Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383923.1:4506361-4530001[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.26 14 6.7 2.0 1 23 245 267 245 267 0.98

2 9 0.0034 0.18 12.6 0.0 1 23 274 296 274 296 0.98

3 9 8e-05 0.0044 17.7 1.4 2 23 317 339 316 339 0.96

4 9 1e-05 0.00056 20.5 0.2 1 23 348 370 348 370 0.98

5 9 4.3e-05 0.0024 18.5 1.8 1 23 375 397 375 397 0.98

6 9 0.0011 0.058 14.2 1.6 1 21 405 425 405 430 0.93

7 9 2.7e-05 0.0015 19.1 0.7 1 23 435 458 435 458 0.98

8 9 0.0031 0.17 12.7 3.7 1 23 464 487 464 487 0.98

9 9 0.00013 0.0071 17.0 2.6 1 21 496 516 496 517 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.26	14	6.7	2.0	1	23	245	267	245	267	0.98
2	9	0.0034	0.18	12.6	0.0	1	23	274	296	274	296	0.98
3	9	8e-05	0.0044	17.7	1.4	2	23	317	339	316	339	0.96
4	9	1e-05	0.00056	20.5	0.2	1	23	348	370	348	370	0.98
5	9	4.3e-05	0.0024	18.5	1.8	1	23	375	397	375	397	0.98
6	9	0.0011	0.058	14.2	1.6	1	21	405	425	405	430	0.93
7	9	2.7e-05	0.0015	19.1	0.7	1	23	435	458	435	458	0.98
8	9	0.0031	0.17	12.7	3.7	1	23	464	487	464	487	0.98
9	9	0.00013	0.0071	17.0	2.6	1	21	496	516	496	517	0.95

Sequence Information

Coding Sequence: ATGCACCGTGTTGTGCGAACGATATTAAAAGCCCGACCGGTGGAATACCTCCACCCTACAGAAGATCGCAGCCAAATAACTGTTCCTGCGCTATCTCCGGACACCAATCTTTGCTACATCTGCTGCCATATGGTAAACAAGTTATGGCTATTTAAAGCTTTATGCTTTAAGAGGAGTTTAGAATATCCTGTAATGTTCAGTGATATAGGACCAATCAATTTACAAAGAACTTATACAGAATGTCATATTTTATGCTCCAGTGAGTCATGCCACAGTCAAACTAAACTTTCTAACTGCACATCACAACATATTAGTTATGATAATGATAATGAAGCACATAATAGATATAACGATAGTAAATATGTAGAATTACATAATGAACGAAATGATTTTGATGATTTCGTTAATGTGATAGGAACACCTGAAGTCTTTAAGAATCAAATAACCGTGCATAATGAGAATGGTGTTGAAAATATGAAATCTGAAAACTATAATAACACATATAACATAACAGAAGATAATGAATATGAAAGTTCAGTCGATAATGAAAATGGTGAAGTTTTATTAAAAGAAGAAGTTAACATGGGTTTGACGGAAATACACGACACAGAAAAGAAGAGTAAATCAAGGAAACAGAAGAAATGCGGATTGAATGACAAATTATTAACAGTAGAAGAACAGAAATTGGAATTAGAATTAAAGAGGAAGGAGAAGAAATATATGGATGCGGAGTTCAAATGTTATAATTGTGCTTTAGGATTTTTATTTAAAGATACTTATCAGACCCATATGATGAGGCATGAGGAGTCTAACGGAGAGTATAGGTGTGATGTGTGCACGCTCCGTTTCGCAGCGCAAGCGGTCCTGCGAGCTCACCAAGCGGTACACGCGCGTGGTTCTACTGGGAACCAAGAGAGAACCGTCAAAGAGATTTATTTACTGAACACGCCCTGTCACCTTTGCGGAAGAATGTTCAAGGACGGGAATGGATTACAGCAACACCTCAGAAGGTTCCATCAGTCGAATACCAGTAACAGGAGTTACTCGTGCAGTGTCTGTGGGAAGGTATACAACAATCAGGCGGCTGTGAGAACACATCTTATGAAACATATAAATAGGAAGTTCACGTGCGAACAGTGCCCGTCGACGTTCAGCAGCCCGTACACGCTGAACCAGCACAAGAAGCGACACGAGATGACGTCACAGGAGCAGCATCACTGCGAGATTTGCAACTTGACATACAGCACTCGTAAGAGCCTCTTGGCTCATAAACGAAACGCGCTCGTCCACCAGCAAACTGTCTTCAAATGCCCGGTTTGCAATCGCATTTGCCCTAACCAGCGTGCCCTGACTTCTCACATAACGACTGTTCACTCGACGAGCAAGGACTACTCGTGCCATCTATGCAGGAACCAGTACACCAGCAGAAAGTCCCTAGTGAGACACATTTCAACAAGTCATATGAAGCCACAATCCAAAGATATACACGTCTGCCACAGATGTCCGAGTACTTTTAAGAGTCAGAGCAAACTCAACCGTCATCTAAGAGAGGTCTGCGAGAAGGAGAGGTTTGAAGAATTACTTTTCACTTGA
Protein Sequence: MHRVVRTILKARPVEYLHPTEDRSQITVPALSPDTNLCYICCHMVNKLWLFKALCFKRSLEYPVMFSDIGPINLQRTYTECHILCSSESCHSQTKLSNCTSQHISYDNDNEAHNRYNDSKYVELHNERNDFDDFVNVIGTPEVFKNQITVHNENGVENMKSENYNNTYNITEDNEYESSVDNENGEVLLKEEVNMGLTEIHDTEKKSKSRKQKKCGLNDKLLTVEEQKLELELKRKEKKYMDAEFKCYNCALGFLFKDTYQTHMMRHEESNGEYRCDVCTLRFAAQAVLRAHQAVHARGSTGNQERTVKEIYLLNTPCHLCGRMFKDGNGLQQHLRRFHQSNTSNRSYSCSVCGKVYNNQAAVRTHLMKHINRKFTCEQCPSTFSSPYTLNQHKKRHEMTSQEQHHCEICNLTYSTRKSLLAHKRNALVHQQTVFKCPVCNRICPNQRALTSHITTVHSTSKDYSCHLCRNQYTSRKSLVRHISTSHMKPQSKDIHVCHRCPSTFKSQSKLNRHLREVCEKERFEELLFT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00112747;
90% Identity: -
80% Identity: -