Spav010215.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- Zfy2
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:1848105-1859480[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00056 0.031 15.0 1.0 2 23 175 196 174 196 0.94 2 12 0.041 2.3 9.1 0.3 5 20 217 232 213 236 0.89 3 12 1.4 80 4.3 0.8 5 21 281 297 278 298 0.93 4 12 5e-05 0.0028 18.3 1.8 1 23 310 333 310 333 0.98 5 12 0.00076 0.042 14.6 0.2 6 23 344 361 342 361 0.96 6 12 4.1e-06 0.00022 21.8 4.6 1 23 373 396 373 396 0.98 7 12 0.0027 0.15 12.9 3.1 6 23 407 424 405 424 0.96 8 12 0.0015 0.082 13.7 1.5 1 23 458 481 458 481 0.98 9 12 0.26 14 6.6 0.1 6 20 492 506 490 508 0.91 10 12 0.0065 0.36 11.7 1.4 1 23 519 542 519 542 0.98 11 12 5.6e-05 0.0031 18.2 0.6 5 23 552 570 550 570 0.96 12 12 0.00038 0.021 15.5 1.2 2 22 579 599 578 599 0.95
Sequence Information
- Coding Sequence
- ATGGATAGCAAGGAACATCTCACTCTCAGCTGTGAAACATTGAGTACCACAGCTCCAGAGGCCAAGATGAATCTACAGATATCTACACAAACATTTAAAATAGAAATTAAAGAAGAAACACCAGCAGAGTGCAGTGATGAAGAGGAATCACCTGGAAGGCAATATATGAATCCATCTGAACTTTTAGAGTCACCCGAGTATAGAAATTACTATGACAGTAATATTGATGTTTTGGAAGAACTGAAGAAGGAATTCCTTGAGGATGAATGCTCTCAATCGAACCATAGTATGAATCATAAAATAGTTTCTGAGAATACGGAATTATTAACGCTTATAAAAAAACAAAAAGTAAAAATTGAAAATACCGATGTGGCATTTTCACTGAATTTAAAGAAAGCAAATTGTGATAGAAATAACCAGATTACCATAAAAACGGAGATGCTAGAAGAGCAAGACATTAATTGGAATAATTCTGGAGCCACTAGCGTACATTATGATGCCCTAGTAAATCCACAAGAAGTTAAATGCATGTTATGTGATAGAATATTCAAAAATAGTTTCAATTTATTAAGGCACAATAATGATCACTTAAAAATTGAAATGAACACACAAGCGGATTGTGAATTCTATGAGGTACACCAGTACCAATATTGCGGCAAAGGTTTTAATAACCATGATAATATGCTTGCACACGTCGGTGATGTTCACAGCGAGGAACAACCCAAGGGTGGATTATACGGAAAGCAATTCCAGAGCGTGTCAGTTCTTAAACGAACGCTGGTTTCACCCAAAATTAAGAATTTACCAAATCAAGTAACTCCAAACCATAACAAAAGTATACATTGCAATATAGATTCCAAACATAAATCCAGATTGAATAACCATATGAATCTATGTCGTATTGGTAAGGAGGATGAGAAAATGAAATATAAATGTGACTTATGCGAGACTATTTATAAAAATAAAAATTATTTAACAAAGCATATAAATAGGATGCATTATGATTACGGAAGAACGTTTGATTGTTGGTGCGGGAAAGAGTATCGTACACCGGAGTACTTACGTGAGCATATGAGTCGGCATGATGGCAAAATGAAAAATTCAAATAACGATAATTTTCAATGTGACTCTTGCCAAAAAACATTCAAAACCAAACACTATTTAAAATGGCATATAAAAACTGTTCATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGATACATTTACGTCAACATAAGAAACGGCACACTGACGGTAACATTAATGATGCAAATAATGACGAATTACACAGATTAAAAAACCGTGTCAAGTTATGTATCACTGTTAAAGATGGTGAGGAAATTAAATATAAATGTGACTCTTGCGAGCGCCTTTACAAAAGTAAACGGACTTTAGTAGCACATATAAAAAAGACTCATTATGACTATGGAAGAATGTTCGAGTGTTGGTGCGGGAAACAGTTCCCCTCACCGATACACTTGGCTGAACATAAGAGCTTGCGACAATGTACCAATAGAGATAATGAATTATACAAATGTAAATTCTGCGAGGCGTTGTTTAATGCGAAAAAGAGTTTAACAGAGCATATAAAGAGGATGCATTATGATTACGGCAAAACGTTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCGCAGTACTTACGTGAGCATATGAGGCGGCATGAAGAGAAAAATAAAAATAGAGTTCAATGTGACTACTGCCAAAAACAATTCAAAATCAAACGTTATTTAAAAATTCATATGAAAAAATGTTCATTACGATTATGTGATGTGACCAGACCGTTAATTACACCAGCTTCAAAAAGAGCAAAATCCGTCGCAGAACGGCAACGAGAGTACCGAATCCGGAAAAAGCAGCAAAACAATGAAAAAAAATCCAGAGCTACATACTTTCGACAATACCGGTTGAAGAAAAAACATCAAAATTTAGTAACGAATGTGGATTCTGATTCTGCTACAATGATTTCGAGTCAAGAAGCTGGTTCTTCTGGGTACCTAACACATGTGAATGTACCACAGTTGTTGCCATCAAGTCCTGATCCAAGAACTATAATAATACATCACGATGCAGTTATTGAAAGCGTAGCATTACTAGCAGTCACTAGATGTAAGGATAAACCGTGCCAGACTCAGGGAACATCTGGCACGGTGACTCATGGTACTGCCGTCCCTTTCCCACGGTTAGCCTCGCTCTGCGGACCGACGCTATCGCACGACCGGCTGCGAGGCATAGGGCGAGGTTAA
- Protein Sequence
- MDSKEHLTLSCETLSTTAPEAKMNLQISTQTFKIEIKEETPAECSDEEESPGRQYMNPSELLESPEYRNYYDSNIDVLEELKKEFLEDECSQSNHSMNHKIVSENTELLTLIKKQKVKIENTDVAFSLNLKKANCDRNNQITIKTEMLEEQDINWNNSGATSVHYDALVNPQEVKCMLCDRIFKNSFNLLRHNNDHLKIEMNTQADCEFYEVHQYQYCGKGFNNHDNMLAHVGDVHSEEQPKGGLYGKQFQSVSVLKRTLVSPKIKNLPNQVTPNHNKSIHCNIDSKHKSRLNNHMNLCRIGKEDEKMKYKCDLCETIYKNKNYLTKHINRMHYDYGRTFDCWCGKEYRTPEYLREHMSRHDGKMKNSNNDNFQCDSCQKTFKTKHYLKWHIKTVHYDYGKVFECWCGKQFRTPIHLRQHKKRHTDGNINDANNDELHRLKNRVKLCITVKDGEEIKYKCDSCERLYKSKRTLVAHIKKTHYDYGRMFECWCGKQFPSPIHLAEHKSLRQCTNRDNELYKCKFCEALFNAKKSLTEHIKRMHYDYGKTFECWCGKQFRTPQYLREHMRRHEEKNKNRVQCDYCQKQFKIKRYLKIHMKKCSLRLCDVTRPLITPASKRAKSVAERQREYRIRKKQQNNEKKSRATYFRQYRLKKKHQNLVTNVDSDSATMISSQEAGSSGYLTHVNVPQLLPSSPDPRTIIIHHDAVIESVALLAVTRCKDKPCQTQGTSGTVTHGTAVPFPRLASLCGPTLSHDRLRGIGRG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -