Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383920.1:10044924-10049981[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.082 4.5 8.2 4.0 1 23 36 59 36 59 0.96

2 18 1.1 60 4.7 0.2 3 23 87 108 87 108 0.94

3 18 0.18 10 7.1 5.1 2 23 131 153 130 153 0.94

4 18 0.0053 0.29 11.9 0.1 1 23 157 180 157 180 0.93

5 18 0.03 1.6 9.6 1.7 2 19 186 203 185 203 0.96

6 18 0.35 19 6.2 0.2 1 23 212 235 212 235 0.89

7 18 0.00046 0.025 15.3 4.1 1 23 241 264 241 264 0.95

8 18 0.0003 0.017 15.9 0.5 2 23 271 292 270 292 0.94

9 18 0.91 50 4.9 5.7 1 23 343 366 343 366 0.96

10 18 0.58 32 5.5 0.3 2 23 392 414 391 414 0.92

11 18 0.074 4.1 8.3 4.2 2 23 437 459 436 459 0.94

12 18 0.023 1.2 10.0 0.0 1 23 465 488 465 488 0.93

13 18 0.00023 0.013 16.2 0.1 2 23 494 516 493 516 0.89

14 18 1.3 74 4.4 0.1 2 23 521 543 520 543 0.87

15 18 1.2e-05 0.00069 20.2 0.8 1 23 550 573 550 573 0.96

16 18 0.00031 0.017 15.8 0.4 2 23 580 601 579 601 0.94

17 18 0.0028 0.15 12.8 3.9 1 23 607 629 607 629 0.98

18 18 3.1e-06 0.00017 22.1 0.8 1 23 635 657 635 658 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.082	4.5	8.2	4.0	1	23	36	59	36	59	0.96
2	18	1.1	60	4.7	0.2	3	23	87	108	87	108	0.94
3	18	0.18	10	7.1	5.1	2	23	131	153	130	153	0.94
4	18	0.0053	0.29	11.9	0.1	1	23	157	180	157	180	0.93
5	18	0.03	1.6	9.6	1.7	2	19	186	203	185	203	0.96
6	18	0.35	19	6.2	0.2	1	23	212	235	212	235	0.89
7	18	0.00046	0.025	15.3	4.1	1	23	241	264	241	264	0.95
8	18	0.0003	0.017	15.9	0.5	2	23	271	292	270	292	0.94
9	18	0.91	50	4.9	5.7	1	23	343	366	343	366	0.96
10	18	0.58	32	5.5	0.3	2	23	392	414	391	414	0.92
11	18	0.074	4.1	8.3	4.2	2	23	437	459	436	459	0.94
12	18	0.023	1.2	10.0	0.0	1	23	465	488	465	488	0.93
13	18	0.00023	0.013	16.2	0.1	2	23	494	516	493	516	0.89
14	18	1.3	74	4.4	0.1	2	23	521	543	520	543	0.87
15	18	1.2e-05	0.00069	20.2	0.8	1	23	550	573	550	573	0.96
16	18	0.00031	0.017	15.8	0.4	2	23	580	601	579	601	0.94
17	18	0.0028	0.15	12.8	3.9	1	23	607	629	607	629	0.98
18	18	3.1e-06	0.00017	22.1	0.8	1	23	635	657	635	658	0.96

Sequence Information

Coding Sequence: ATGTCAGAAAGAGAGAGAAGAAAGAGAAAAGTCGAGTTGATTAGTTTACTCGTTGCGATCCTTGAGAATTCAACGATAATACCATTTAGGTGGCATTCCAACAAATATATGTGCTTTTACTGCTCGTGTTTGTTTTTTGAAAGCTCAAAACTTAAAGAGCATATGAAAGAAGAACACCGCGGAGACGTTAAAATCACGAAAGATGTCCGTAGATTGCTTACCTCATGCCGAATAAAGCTAGACGTATCAGATATAGGCTGCAAGCTATGCCCGAAGAAACTCCAAAATTTTGAAGGGTTTTTGGCTCACATCTCGGAGGCTCACGATTTTGCTTTTAATAAAGAACTTGCTACATGCATATTTACGTTTAAATTGAACGATGGGCTAATGTCATGCTGCGATTGTAAGGCGACTTTTAGATTCTTCGGTTCTTTGATGAAACACGTCCATAGATACCATAATAGGATGTTCCTTTGTGAAATATGCGGGGAAGGTTTTATTGGGAAAAGAGACGTTGAAAGCCATATACAGAATAAACACGTTTTAAACCCGATACATTGTACCAAATGCGATAACGTTTTTCAAAGCGCGAGCTCGTTGAGACACCACGACGATCTCGTCCACAAAGATACGTTTAAATGCCCAAAATGTCCGGAGATATTGAAGAGTATACTCTCAAAGCGGCAACATTTAGCAAAGGTGCATGATATAAAACGTAGATTTAATTGCGATCAGTGTCAGCAAGTGTTCACCAGAAATAGCACCTTGGTCCACCATAAATCAAGATTCCATTTGAAAGAGAAGACGGTGACATGCGAAATCTGCGGTTTCAAAGTTTTTAACAACCAGTTATTGAAGCGTCATATGATAAAGCACGACGGATCGCGGCCTTTCGAATGCGGGCAGAAACATACATTAGCAATCGAAGATATGTCAGAGAGCCGGCGGAAAGACGAACTAACGAGATTGCTAGCTGCGGTCCTTGAGAATTCTACAATAATACCGTTCAGATGGTTTTCTAACAAGTATATGTGCTTTTACTGCTGTTGCCCGTTCTTCGAGAGCTCAAAACTTAAAGAGCACATGAGAGAAGAACACCTGGACGCCAAAGTGACGAGAGTAGTTCGCAGTTTACTCACCTCATGCAGAATAAAGCTGGACGTATCAGACATTACCTGCAGGCTTTGTCCAAAAAAACTACAAACCTTCGAAGAGTTTTTGAATCATATCTCTGACGAGCACGATTTCAAGTTTAATAAGGATATAGGCCGATGCGTTTTTACGTTTAAACTGAATGACAAGTTAATGTCCTGCTGTGACTGTGGGGAGAAGTATAAATTTTTCGGTTCTTTGTTGAGGCACGTTCACAAATATCACAATAGATCTAGTACGTTCCTATGCGAAATTTGCGGTCAAGGTTTCGTTGGGAAGGCGAACGTCGATATTCACGTGAAAAATGTCCACGTTTTAAACCCAATAGTTTGTAGCAAATGCGGCAAAATCTTCAACAGTGTCAGCGCTTTAAAAAACCATGAAGATCTCGTTCACAAAGATAAGTTGAAATGCCCTAAATGTCCTGAGATACTTGGAAGTGTGTATTTGAAACGGCGACACTTGGCGTTGGTTCACGATGTGAAAAATTTCCAATTCACGTGCGATCAGTGCCCGCAAGTGTTTACGAGAAATAGTAGCTTGGTTCAGCACAAGTCGAGGGTGCATTTGAAAGAGAAGACGGTGACGTGTGATGTCTGCGGTTTCAAGGTTTTCAACAATGAATTGTTGAAGCGTCACATGATAAAGCACGACGGATCGCGGCCATTCGAATGCGAGTTCTGTAAGAAATCATTTCAGAGGAAGAAAACTTTGGAATTCCACAGAAGAATTCATACAAACGATAAACGTTACGTGTGTAAGGTTTGCGGAAAAGCCTTTGTTCAAGTGACAAGTTTAAAGCTCCATTTAAAGGTTCATCATTCCTCCAATGATAACTCCTCGTGGACGTAA
Protein Sequence: MSERERRKRKVELISLLVAILENSTIIPFRWHSNKYMCFYCSCLFFESSKLKEHMKEEHRGDVKITKDVRRLLTSCRIKLDVSDIGCKLCPKKLQNFEGFLAHISEAHDFAFNKELATCIFTFKLNDGLMSCCDCKATFRFFGSLMKHVHRYHNRMFLCEICGEGFIGKRDVESHIQNKHVLNPIHCTKCDNVFQSASSLRHHDDLVHKDTFKCPKCPEILKSILSKRQHLAKVHDIKRRFNCDQCQQVFTRNSTLVHHKSRFHLKEKTVTCEICGFKVFNNQLLKRHMIKHDGSRPFECGQKHTLAIEDMSESRRKDELTRLLAAVLENSTIIPFRWFSNKYMCFYCCCPFFESSKLKEHMREEHLDAKVTRVVRSLLTSCRIKLDVSDITCRLCPKKLQTFEEFLNHISDEHDFKFNKDIGRCVFTFKLNDKLMSCCDCGEKYKFFGSLLRHVHKYHNRSSTFLCEICGQGFVGKANVDIHVKNVHVLNPIVCSKCGKIFNSVSALKNHEDLVHKDKLKCPKCPEILGSVYLKRRHLALVHDVKNFQFTCDQCPQVFTRNSSLVQHKSRVHLKEKTVTCDVCGFKVFNNELLKRHMIKHDGSRPFECEFCKKSFQRKKTLEFHRRIHTNDKRYVCKVCGKAFVQVTSLKLHLKVHHSSNDNSSWT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -