Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383920.1:1978979-1982866[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00061 0.034 14.9 2.1 1 23 69 92 69 92 0.98

2 16 0.0017 0.094 13.5 0.6 5 23 102 121 100 121 0.95

3 16 3.6e-05 0.002 18.8 1.0 1 23 133 156 133 156 0.98

4 16 0.011 0.6 11.0 0.9 6 23 167 185 165 185 0.95

5 16 0.0084 0.46 11.3 0.7 1 23 197 220 197 220 0.97

6 16 0.035 1.9 9.4 0.3 5 23 230 249 228 249 0.94

7 16 0.0063 0.35 11.7 0.9 1 23 261 284 261 284 0.97

8 16 0.1 5.6 7.9 1.6 5 23 294 313 292 313 0.95

9 16 6.2e-05 0.0034 18.0 1.0 1 23 325 348 325 348 0.97

10 16 0.013 0.74 10.7 1.4 5 23 358 377 356 377 0.95

11 16 0.00023 0.012 16.3 0.8 1 23 389 412 389 412 0.97

12 16 0.013 0.74 10.7 1.4 5 23 422 441 420 441 0.95

13 16 0.0012 0.064 14.0 0.7 1 23 453 476 453 476 0.97

14 16 0.0026 0.14 12.9 1.8 5 23 486 505 484 505 0.95

15 16 0.0027 0.15 12.9 0.4 1 23 517 540 517 540 0.97

16 16 0.023 1.3 9.9 0.2 5 23 550 569 548 569 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00061	0.034	14.9	2.1	1	23	69	92	69	92	0.98
2	16	0.0017	0.094	13.5	0.6	5	23	102	121	100	121	0.95
3	16	3.6e-05	0.002	18.8	1.0	1	23	133	156	133	156	0.98
4	16	0.011	0.6	11.0	0.9	6	23	167	185	165	185	0.95
5	16	0.0084	0.46	11.3	0.7	1	23	197	220	197	220	0.97
6	16	0.035	1.9	9.4	0.3	5	23	230	249	228	249	0.94
7	16	0.0063	0.35	11.7	0.9	1	23	261	284	261	284	0.97
8	16	0.1	5.6	7.9	1.6	5	23	294	313	292	313	0.95
9	16	6.2e-05	0.0034	18.0	1.0	1	23	325	348	325	348	0.97
10	16	0.013	0.74	10.7	1.4	5	23	358	377	356	377	0.95
11	16	0.00023	0.012	16.3	0.8	1	23	389	412	389	412	0.97
12	16	0.013	0.74	10.7	1.4	5	23	422	441	420	441	0.95
13	16	0.0012	0.064	14.0	0.7	1	23	453	476	453	476	0.97
14	16	0.0026	0.14	12.9	1.8	5	23	486	505	484	505	0.95
15	16	0.0027	0.15	12.9	0.4	1	23	517	540	517	540	0.97
16	16	0.023	1.3	9.9	0.2	5	23	550	569	548	569	0.95

Sequence Information

Coding Sequence: ATGAGCTCTTCTTCCCGCACACTTCCGTCCCTGCTTACACCCAAACCTACCGGGCGAGAAGAAGGAGAAACGAATGGAAACACGATTGCGTTGTTTTCGTGCCAACTCACGGTGAACTGGGCGCTGGCGGATATTCATATTATAATCCTACATAGAACTACTAATCATAAGCCTGTGTCGCCAACAGATACAAATGAGGCCAAATTCCAATGTGACTCCTGCCAGAAAGTTCTCAGAAGCAAAAAGAGCTTATCACAACATACAAAAAGAATACATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCGATGCTTCTTTATAAGCATAAGCGGATGCTGCATGATGGCAGGGATAAAGATACGAATGAGAGCAAATTCCAATGTGACTATTGCCAGAAAGTTATTAGAAGCAAAAATAGTTTATTACAACATATAAAAAGAATACATTACGATTATGGTAATGTATTTGAATTTTGGTGCGGGAAACATTTCCGTACACCATTGCTTCTTTATAGCCATAAGCGGATGCTGCATGATGACAAGGATAAAGATACAAATGAGAGCAAATTTCAATGTGACTCCTGTCAGAAAGATCTCGGAAGCAAAAAGACTTTATTACAACACATTAAAAATATACATTATGATTATGGTAAATTATTTGAATGCTGGTGCGGGAAACAGTTTCGTACACCACTGCTTCTTTATAGCCATAAGCAGATGCTGCATGATCGCATTGTTAAAGATAAAAATGAGAGCAAATTCCAATGTGACTCTTGCCAGAAAGTTCGCGGAAGCAAAAAGACTTTACTACAACATATTAAAAATGTACATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGCTTCGCCTCCATGATCATAAGAGGATGCTGCATGATCGCAATGTTAAAGATACAAATGAGAACAAATTCCAATGTGACTCTTGCCAGAAAGTTTTCGGAAGCAAAAAGACTTTACTACAACACATTAAAAATATACATTATGATTATGGTAAATTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCATTGCTTCTTTATCACCATAAGCGGATGCTGCATGATGGCAAGGATAAAGATACAAATGAGAGCAAATTCCAATGTGACTCTTGCCAGAAAGTTATTAGAAGCAAAAATAGTTTATTACGACATATTAAAAATGTACATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCATTGCTTCTTTATCACCATAAGCGGATGCTGCATGATGGCAAGGATAAAGATACAAATGAGAGCAAATTCCAATGTGACTCTTGCCAGAAAGTTCTCGGAAGCAAAAATTATTTGTTAAAACATATAAAAAATATACATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGTTTCACCTTTATGAGCATAAGAGGATGCAGCATGATCGCATTATTAAAGATAAAAATGAGAGCAAATTCCAATGTGACTCTTGCCAGGAAGTTCTCGGAAGCAAAAAGACTTTATTACGACATATTAAAAATGTACATTATGATAATGGTAAAGTATTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGCTTGGCCTTTATGATCATAAGAGGATGCTGCATGATCGCAATGTTAAAGATACAAATGAGAGCAAAATTCCAATGTGA
Protein Sequence: MSSSSRTLPSLLTPKPTGREEGETNGNTIALFSCQLTVNWALADIHIIILHRTTNHKPVSPTDTNEAKFQCDSCQKVLRSKKSLSQHTKRIHYDYGKVFECWCGKQFRTPMLLYKHKRMLHDGRDKDTNESKFQCDYCQKVIRSKNSLLQHIKRIHYDYGNVFEFWCGKHFRTPLLLYSHKRMLHDDKDKDTNESKFQCDSCQKDLGSKKTLLQHIKNIHYDYGKLFECWCGKQFRTPLLLYSHKQMLHDRIVKDKNESKFQCDSCQKVRGSKKTLLQHIKNVHYDYGKVFECWCGKQFRTPLRLHDHKRMLHDRNVKDTNENKFQCDSCQKVFGSKKTLLQHIKNIHYDYGKLFECWCGKQFRTPLLLYHHKRMLHDGKDKDTNESKFQCDSCQKVIRSKNSLLRHIKNVHYDYGKVFECWCGKQFRTPLLLYHHKRMLHDGKDKDTNESKFQCDSCQKVLGSKNYLLKHIKNIHYDYGKVFECWCGKQFRTPFHLYEHKRMQHDRIIKDKNESKFQCDSCQEVLGSKKTLLRHIKNVHYDNGKVFECWCGKQFRTPLGLYDHKRMLHDRNVKDTNESKIPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01317544; iTF_01317537; iTF_01317582;
90% Identity: -
80% Identity: -