Spav002929.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- Znf131
- Assembly
- GCA_947532125.1
- Location
- OX383909.1:16618266-16619885[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.0014 0.079 13.7 0.6 1 23 170 193 170 193 0.97 2 12 0.011 0.6 11.0 0.1 2 23 218 239 217 239 0.97 3 12 2.7e-06 0.00015 22.3 1.7 1 23 245 267 245 268 0.96 4 12 0.00094 0.052 14.3 3.8 1 23 275 297 275 297 0.98 5 12 8e-06 0.00044 20.8 1.1 1 23 303 325 303 325 0.97 6 12 0.00017 0.0093 16.7 0.3 2 23 332 353 331 353 0.96 7 12 4e-05 0.0022 18.6 2.0 1 23 359 381 359 381 0.98 8 12 1.3e-05 0.00071 20.2 0.6 3 23 389 410 388 410 0.97 9 12 1.4 78 4.3 0.3 3 23 417 434 416 434 0.74 10 12 0.0092 0.51 11.2 0.5 3 23 442 463 440 463 0.93 11 12 0.00096 0.053 14.3 0.2 1 23 469 494 469 494 0.97 12 12 2.3e-05 0.0012 19.4 2.0 1 23 500 523 500 523 0.95
Sequence Information
- Coding Sequence
- ATGGTAACAGAATTATGTCGTGTATGCCTTAATAAAACAGGCATTTTTTCTATATTCGACAAACAAGATGACTTACAATATAACGAAAAAATAATGAAGTGCGTGAATATCACTATAACTAAGGGCGATGGTATGCCAGACTCCATCTGTGAAACGTGTGCTGGAGATCTCTCGGTCTCTTACGACTTTATTACCAAGTGCAAAACATCAGACACTGCCCTACGTTGTCTTTCCCTCGATAATCAACCAGATTATGAGTTCAAAGAGGAAAACGTAAAAGTAGAAGCATCTTATGATTTTGGCTATTCTACTCTCGATCAAAAGGCAGACTTATCTGATGATTCTACTTTTGATAGTCCAGTGCTTGGTAATAAAATTAGAGCCAAAAAAATTGAAAAAAGTAAAATAAAGAAATCAGGCACAGTTGTGTGTGATATTTGTGGATATAAAACATTATGTTATTCAATTTTGGAAAGTCACATGCAGGTACATACTAAAGATAGACCCTTTACATGTAATATGTGTGACTCTGCCTTTATCTTGGAAAAAATGCTATTCCGCCACATGGAGTCAAGGCATGATAAAGTTTTACATAGGAAAAATAAAGTTAAAGGTTATGTAAAGAAGCCTAGACCAAAAATGGGACCTATACAATGTGTCATGTGTGGATTAATGGTTCAGAGCAAATCTGCAATGGAAGCTCACAGTCGTACCCACACTGGTGAGAAACCATTTAGATGTGATGTATGTGATATGACATTTAATGTAAAAGGTTCACTCAAGAAGCATATTGAAACACATCATTTGGAAAGGGAAAGAAAATTTATATGTGAGACTTGTGGTTGTAGTTTCTTTCGTAAATGTGAAATAATAGCACATATAAGGAGACACACTGACGAAAGACCGTACTCATGTGAACTCTGCCCAAAATCATTTAGACAAATTTCTTCATTGATACGTCACAAATATTCACACACCGGTGAGCGTAGACAATCATGCCCCATATGTTTAAAAATGTTTTATGACAAATCAGCTATCCGGAAACATTTGTCAGTTCATAGTGATGAAAGAAAATATAGCTGTCACCTCTGCAACAAATCAGTCAAGAGTAAAGGATCATTAGCAACACATTTAAAGTTGCACTCCAATGAAAAACAGAATATATGTAATTTTTGCGGTATGGCGTTCTCCTTAAAAGGCAACCTCCAGACACATATACGTAGGAAACATTCAGAAAGGTCTGGCCCATGTTTGGTATGTATGAAGACATTTCCGGATTTGGAGGAGCACATGCGTAAACATACTGGTGAAAAACCATTTGGGTGCAAGTTGTGTGATCAAGCTTATGCAACAAAACGGAGTCTGTCATACCACATTATATTTAAACATGAGAATGCTGAAAAGTTTAAATGTTCAATCGGTGAATGCACAAAGACTTTCCCCACTGGGAAGTTACTGGAAGTTCATCTTATTAAATACCATACAAATCACACGCCATACATTTGCCCACATTGCTCAAGAGGCTTTTTTCGTACCAGTGATCTTACAAGACATCTGAAGGGCAGTCATATGGACACAACAAAGATTACGGTGAAAACCAATGTCCTGGAAATAAAATAA
- Protein Sequence
- MVTELCRVCLNKTGIFSIFDKQDDLQYNEKIMKCVNITITKGDGMPDSICETCAGDLSVSYDFITKCKTSDTALRCLSLDNQPDYEFKEENVKVEASYDFGYSTLDQKADLSDDSTFDSPVLGNKIRAKKIEKSKIKKSGTVVCDICGYKTLCYSILESHMQVHTKDRPFTCNMCDSAFILEKMLFRHMESRHDKVLHRKNKVKGYVKKPRPKMGPIQCVMCGLMVQSKSAMEAHSRTHTGEKPFRCDVCDMTFNVKGSLKKHIETHHLERERKFICETCGCSFFRKCEIIAHIRRHTDERPYSCELCPKSFRQISSLIRHKYSHTGERRQSCPICLKMFYDKSAIRKHLSVHSDERKYSCHLCNKSVKSKGSLATHLKLHSNEKQNICNFCGMAFSLKGNLQTHIRRKHSERSGPCLVCMKTFPDLEEHMRKHTGEKPFGCKLCDQAYATKRSLSYHIIFKHENAEKFKCSIGECTKTFPTGKLLEVHLIKYHTNHTPYICPHCSRGFFRTSDLTRHLKGSHMDTTKITVKTNVLEIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01316599;
- 90% Identity
- -
- 80% Identity
- -