Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383920.1:1933208-1937628[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 6e-05 0.0033 18.1 0.7 2 21 174 193 173 195 0.90

2 16 0.66 36 5.4 0.8 5 22 216 233 207 235 0.80

3 16 1.6e-05 0.00089 19.9 0.4 2 23 241 263 241 263 0.96

4 16 0.051 2.8 8.9 1.5 2 21 278 297 277 298 0.91

5 16 9.8e-05 0.0054 17.4 0.2 1 23 310 333 310 333 0.98

6 16 0.033 1.8 9.5 0.7 6 23 344 362 342 362 0.90

7 16 3.4e-05 0.0019 18.9 1.1 1 23 371 394 371 394 0.98

8 16 0.1 5.5 7.9 1.1 5 23 404 423 402 423 0.90

9 16 3e-05 0.0017 19.0 1.5 1 23 432 455 432 455 0.98

10 16 0.00061 0.033 14.9 2.2 6 23 466 484 464 484 0.96

11 16 6.5e-06 0.00036 21.1 3.6 2 23 497 519 496 519 0.97

12 16 0.0012 0.064 14.0 1.1 5 23 529 548 527 548 0.94

13 16 0.074 4.1 8.3 4.2 1 23 581 604 581 604 0.98

14 16 0.14 7.9 7.4 0.2 6 19 615 628 613 629 0.93

15 16 0.00057 0.031 15.0 1.9 2 23 642 664 642 664 0.94

16 16 0.003 0.17 12.7 1.4 6 23 675 692 673 692 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	6e-05	0.0033	18.1	0.7	2	21	174	193	173	195	0.90
2	16	0.66	36	5.4	0.8	5	22	216	233	207	235	0.80
3	16	1.6e-05	0.00089	19.9	0.4	2	23	241	263	241	263	0.96
4	16	0.051	2.8	8.9	1.5	2	21	278	297	277	298	0.91
5	16	9.8e-05	0.0054	17.4	0.2	1	23	310	333	310	333	0.98
6	16	0.033	1.8	9.5	0.7	6	23	344	362	342	362	0.90
7	16	3.4e-05	0.0019	18.9	1.1	1	23	371	394	371	394	0.98
8	16	0.1	5.5	7.9	1.1	5	23	404	423	402	423	0.90
9	16	3e-05	0.0017	19.0	1.5	1	23	432	455	432	455	0.98
10	16	0.00061	0.033	14.9	2.2	6	23	466	484	464	484	0.96
11	16	6.5e-06	0.00036	21.1	3.6	2	23	497	519	496	519	0.97
12	16	0.0012	0.064	14.0	1.1	5	23	529	548	527	548	0.94
13	16	0.074	4.1	8.3	4.2	1	23	581	604	581	604	0.98
14	16	0.14	7.9	7.4	0.2	6	19	615	628	613	629	0.93
15	16	0.00057	0.031	15.0	1.9	2	23	642	664	642	664	0.94
16	16	0.003	0.17	12.7	1.4	6	23	675	692	673	692	0.96

Sequence Information

Coding Sequence: ATGGATAGCAAGGAGCACGTAACACCCAGCTGTGAAACATTGAGTACCACAGCTCCAGAGGCAGTGATGAATCTACAGATATCTACACAAATATTTAAAATAGAAATTAAAGAAGAAACACCAGCAGAGTGCAGAGATGAAACAGAATCACCTTGCAATGACTATATGTATCCGTCTGAGCCCTTGCAGTCACCAGAGTATGTAAATTACTATGACAGTAAAATGTATGTGTTGAAGAAACTGAAGAAGGAATTCCCTGAGAATGATTGCCGTCAATCAGAAAACAATATGAATGGTAAAATAGTTTCTGAAAATACAGAATTAGTACCACTTATAAAGAAACAAAATATAATAATTGAAAAAGCAGAAGAGGATTTTTTATTAAATTTAAACGACGCAAATGGGAATAAAAATAAGCCAATTATCATAAAAGCGGAAAGGCTAGAAGAGCAAGGCAATAGAGGTAATTCTGGAGTCACTAGCGTACATTATGACGTCTTAGTAACTGCTGAAGACGTTAAATGCAAGATATGTGGTAAAATATTCAAAAATAATTTAAATTTATTAAAGCACAATGATGACCACATAAAAATTGAAATAAACACACCAACGGATAATGAATGTAATGAGTTACACCAGAGCCAATATTGCGATAAACGTTTTGATAACTATAATAAAATGCTTACACACGTCACTGATGTTCACAGCGAGAATAATCCTAAATGTGCAATATGCGGAAAGCAATTTAATAGCGTAAGGAATCTTGAACGTCACATCAAACTTTTACACAAACCTAAGAAATTTCAAAATCAAGTAACTCCAAATGATATGAAATGTATATATTGCAATGTAGATTTCAAACATAAATACAGATTGAATAACCATATGAAGCTATGTCGTATTGGTAAGGAGGTTAAGGGAATGACATATAAATGTGACTCGTGCGAGCGCGTCTATAAGAGTAAAGGGGCTTTAGTATTACATATAAAAAAGGCTCATTATGACTATGGGAAGATGTTTTCATGTTGGTGCGGGAAACAGTTCCCTACACCGATACACTTGACTGAACACAAAAGCTTGCGACATTGTAGCAATAGGGAAAATGAATTATACAAATGTAAATTGTGCGAGGCGGCGTATAATTTGAAGAGCAGTTTAACAAGGCATATGAAAAAAGTTCATTATGATGAAGGGACAACGTTTGAGTGTTGGTGCGGGAAGCAGTTCCCTTCACAGTTACACTTGAATGAACATAAGAGCTTGCGACATTGTAACAATACGAAAAATGAAATATACAAATGTAATTATTGCGAGGCGATGTATAATGTGAAAAATAATTTAACAAAGCATATAAAGAGGATGCATTATGATTACGGGAGAACATTTGATTGTTGGTGCGGGAAACAGTTTCGTACACCGCAGTGCTTACGTGAGCATATGAGGCGGCAGCATGACGGCAAAATGAAAAATAGAAATGACGACAAAGTTCAATGCGACTATTGCCAAAAAAAATTCAAAACCAAACACTATTTATTGACGCATATAAAAACTGTTCATTACGATTATGGTAAAGTATTTAAATGTTGGTGCGGGAAACAGTTCCGTACGCCGAAGCAATTACGTGAACATAAGAGATGGCAGCATGACGGTAATATTAATTGTACTAATGACAAATTATACAAATTGAATAATGATAATATGAAGCTATGTCGTACTGGTAAGGAAGACGAGGAAATAAAATATAAATGTAACTCATGCGAGGGTATTTATAAAAGTAAACATTGTTTAGCATTGCATATAAAGAGGATGCATTATGATTATGGGAAATTATTTGCATGTTGGTGCGGGAAACAGTTTCGCTCACCGATACAGTTAAGTCAGCATAAGTGGCATCAGCATGCTGGCAAAATGGTAGATAAAGCTCGGTGTGACACTTGCCAAAAAATGTTCAAATCCAAAGGCCTATTGTTAAAGCATAATAAAAATGTTCATTATGATTATGGTAAAGTATTTGAATGTTGGTGCGGAAAACAATTTCGTACGCCGAAACTCTTACTTCAACATAAGAAACGACATCCGGATGGCATCATTAATGATACAAATAATGACAAATCCCAAAGTGTCTCGTGTTCCTCCACGAGTTAA
Protein Sequence: MDSKEHVTPSCETLSTTAPEAVMNLQISTQIFKIEIKEETPAECRDETESPCNDYMYPSEPLQSPEYVNYYDSKMYVLKKLKKEFPENDCRQSENNMNGKIVSENTELVPLIKKQNIIIEKAEEDFLLNLNDANGNKNKPIIIKAERLEEQGNRGNSGVTSVHYDVLVTAEDVKCKICGKIFKNNLNLLKHNDDHIKIEINTPTDNECNELHQSQYCDKRFDNYNKMLTHVTDVHSENNPKCAICGKQFNSVRNLERHIKLLHKPKKFQNQVTPNDMKCIYCNVDFKHKYRLNNHMKLCRIGKEVKGMTYKCDSCERVYKSKGALVLHIKKAHYDYGKMFSCWCGKQFPTPIHLTEHKSLRHCSNRENELYKCKLCEAAYNLKSSLTRHMKKVHYDEGTTFECWCGKQFPSQLHLNEHKSLRHCNNTKNEIYKCNYCEAMYNVKNNLTKHIKRMHYDYGRTFDCWCGKQFRTPQCLREHMRRQHDGKMKNRNDDKVQCDYCQKKFKTKHYLLTHIKTVHYDYGKVFKCWCGKQFRTPKQLREHKRWQHDGNINCTNDKLYKLNNDNMKLCRTGKEDEEIKYKCNSCEGIYKSKHCLALHIKRMHYDYGKLFACWCGKQFRSPIQLSQHKWHQHAGKMVDKARCDTCQKMFKSKGLLLKHNKNVHYDYGKVFECWCGKQFRTPKLLLQHKKRHPDGIINDTNNDKSQSVSCSSTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01317492;
90% Identity: iTF_01317492;
80% Identity: iTF_01317492;