Spav010253.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- ZFY_2
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:2154138-2163432[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0014 0.075 13.8 1.0 2 23 143 164 142 164 0.95 2 15 0.028 1.5 9.7 0.7 1 23 246 269 246 269 0.98 3 15 0.00075 0.041 14.6 0.6 5 23 279 298 277 298 0.95 4 15 0.00024 0.013 16.2 1.4 1 23 317 340 317 340 0.98 5 15 1.5e-05 0.00081 20.0 1.2 6 23 351 369 349 369 0.96 6 15 0.00072 0.039 14.7 1.4 1 23 391 414 391 414 0.98 7 15 0.0011 0.061 14.1 1.4 6 23 425 443 423 443 0.95 8 15 0.00014 0.0078 16.9 1.3 1 23 465 488 465 488 0.98 9 15 0.0016 0.086 13.6 0.5 6 23 499 517 497 517 0.96 10 15 0.0015 0.085 13.6 4.3 1 23 524 547 524 547 0.98 11 15 0.0016 0.088 13.6 1.2 6 23 558 576 556 576 0.96 12 15 0.00054 0.03 15.1 2.0 1 23 583 606 583 606 0.98 13 15 0.0028 0.15 12.8 0.3 6 23 617 635 615 635 0.93 14 15 0.0006 0.033 14.9 0.5 1 23 657 680 657 680 0.98 15 15 0.0016 0.09 13.6 0.7 6 23 691 709 689 709 0.94
Sequence Information
- Coding Sequence
- ATGGCTGCACCAACACTGAAACAAGAAACAGTAGAGTGCATAAATGAAGAAGAATCAGCTTGCAGTAACAATATGTATCCATCTGAGCCCTCGGAGACATCTGAGTTTGTGAATTACTATGACAGTAAGGAATATGCATTGAAACAACTGAAGAAAGAATTCCCTGAGGATGAATGTCTTCAATCTCACGTCAGTATGAATAGTAAAATAGTCTTTGAAGACATGAAATTATTAAAACCTATAGATGAACAAACAATAAGACATGAAAATTCAGAGGTTCCTGTATCATCAATAATAAATGAAGAAAATGACAATAAAAAGTACCAGGTTAAAGTAAAAACGGAGGGACTGGAGGAGCAAGATATATTGCATAATGCTGAAGCGACTAGCATACATTATGATGTCCTGGTAACTCCTCGAGTAGTTCAATGCAAGTTGTGCAGTAGAATATTCAAAAACAGTTTCAATTTATTAGAGCACAATAATGAACACGTAAAAGTTAAAATTAACATACCAGGGGATAATGAAATGATTGAGTTACACCAGTACCAATATTACGACAAAGTTTTCAAAAATAGCGATAACATGCTTGCACTCGTCGGTGATGTTCACGGCAATGAAAAACCTAAAGACAAATTATGCAGAAATCAATTACCCAGCACCCTGCACCCTGATGGTATCATTAATGACACAAATAATGACAAACTTACTGGTAAGGCGGTTGAGAAAATGAAATATAAATGTGACTCATGTGAAGGTACTTATAAAAGTAAAGATATTTTAACCGTGCATATAAAGAGCAAGCATTATGATTACGGGAGAACGTTTGAATGTTGGTGCGGGAAACAGTTCCGTACACCGCAGTACTTACGTGGGCATATGAAGCGGCAGCATAATGGTACAAATAATGACAACAAACTTACTGGTAAGGAGGTTGAGAAAATCAAATATAAATGTGACTCATGTGAAGGTAGTTTTAAAAGTAAAAATACTTTAACTGTGCATATAAAGAGCAAGCATTATGATTACGGGAGAACGTTTGATTGTTGGTGCGGGAAACAGTTCCGTACACCGGATTACTTACGTAAGCACATGAGGCGGCAGCATGATGGTAACACTAATGGTACAAATAATGACAAACTTACTAGTAAAGAGGTCGAAAAAATGAAATATAAATGTGACTTATGTGAAGGTACTTATAAAAGTAAATTTTATTTAACTCTGCATATAAAGCGGGTTCATTATGATTATGGTAGAACGTTTGACTGTTTGTGCGGGGAACAGTTCCGCACACCGCATTACTTACGTGAACATATGAGGCAGTATCATGATGGTAACATTAATGGTACAAATAATGACAAACTTACTGATAAGGAGGTTAAGAAAATGAAATATAAATGTAACTCATGTGACGGTACTTATAAAAGTAATTATTCTTTAACTCTGCATATAAAAAGGGTACATTATGATTATGGCAGAATGTTTGCATGTTGGTGCGGGAAACAGTTCCGTACGCCAATACTTTTGACTGAACACAAGAGAACGCTACATGTTGCTAAAAATAAAGTATACAAATGTAAATACTGCGAGGCGGAGTTTAATTTGAAACAATGTTTAACGAAGCATATAAAGAGGATGCATTATTATTATAGGAAATTGTTTGCATGTTGGTGCGGGAAACATTTCCGTACGCCAATACTCTTGACTGAACATAAGAGAACAGTACATGTTGCTAAAAATGAAGTATACAAATGTAAATATTGTGAGGCGGTGTTCAATGGGGAACAATGTTTAATAAAGCATATAAAGAGGATGCATTATGATTACGGGAGAAGGTTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGCAGTACTTACGTGTGCATATAGGGCGGCAGCATGATGGTATCATTAATGATACAAATAATGACAAACTTACTGGTAAGGCGGTTGAGAAAATGAAATATAAATGTGACTCATGTGACGGTACCTATAAAAGTGTATATTCTTTAACTGTGCATATAAAGAGAGTTCATTATGATTACGGGAGAACGTTTGCATGTTGGTGTGGGAAACAGTTCCGTTCACCGGACTACTTACGTGAGCATAAGAGGCTGCGGCATGACGGCAAAATGAAAGACAGGGATAACTACGAAGTTCGATCACAAATCTTGTTAATCGAGTGA
- Protein Sequence
- MAAPTLKQETVECINEEESACSNNMYPSEPSETSEFVNYYDSKEYALKQLKKEFPEDECLQSHVSMNSKIVFEDMKLLKPIDEQTIRHENSEVPVSSIINEENDNKKYQVKVKTEGLEEQDILHNAEATSIHYDVLVTPRVVQCKLCSRIFKNSFNLLEHNNEHVKVKINIPGDNEMIELHQYQYYDKVFKNSDNMLALVGDVHGNEKPKDKLCRNQLPSTLHPDGIINDTNNDKLTGKAVEKMKYKCDSCEGTYKSKDILTVHIKSKHYDYGRTFECWCGKQFRTPQYLRGHMKRQHNGTNNDNKLTGKEVEKIKYKCDSCEGSFKSKNTLTVHIKSKHYDYGRTFDCWCGKQFRTPDYLRKHMRRQHDGNTNGTNNDKLTSKEVEKMKYKCDLCEGTYKSKFYLTLHIKRVHYDYGRTFDCLCGEQFRTPHYLREHMRQYHDGNINGTNNDKLTDKEVKKMKYKCNSCDGTYKSNYSLTLHIKRVHYDYGRMFACWCGKQFRTPILLTEHKRTLHVAKNKVYKCKYCEAEFNLKQCLTKHIKRMHYYYRKLFACWCGKHFRTPILLTEHKRTVHVAKNEVYKCKYCEAVFNGEQCLIKHIKRMHYDYGRRFECWCGKQFRTPQYLRVHIGRQHDGIINDTNNDKLTGKAVEKMKYKCDSCDGTYKSVYSLTVHIKRVHYDYGRTFACWCGKQFRSPDYLREHKRLRHDGKMKDRDNYEVRSQILLIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -