Spav010271.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- ZFY
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:2319708-2321363[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0005 0.027 15.2 2.5 1 23 51 74 51 74 0.98 2 14 9.2e-05 0.0051 17.5 2.6 6 23 85 103 83 103 0.95 3 14 0.0074 0.41 11.5 1.7 1 23 125 148 125 148 0.98 4 14 0.02 1.1 10.2 1.7 5 23 158 177 156 177 0.93 5 14 9.5e-05 0.0052 17.4 0.6 1 23 184 207 184 207 0.98 6 14 1.4e-05 0.00076 20.1 2.1 5 23 217 236 215 236 0.95 7 14 0.00056 0.031 15.0 1.1 1 23 258 281 258 281 0.98 8 14 0.002 0.11 13.3 1.6 5 23 291 310 289 310 0.95 9 14 0.0001 0.0056 17.4 1.0 1 23 332 355 332 355 0.98 10 14 5.4e-05 0.003 18.2 1.6 5 23 365 384 363 384 0.95 11 14 0.0034 0.19 12.5 4.6 1 21 406 426 406 429 0.96 12 14 0.00016 0.0086 16.8 0.4 5 23 439 458 437 458 0.95 13 14 0.0005 0.027 15.2 2.2 1 23 480 503 480 503 0.98 14 14 0.00011 0.006 17.3 0.6 6 23 513 531 513 531 0.98
Sequence Information
- Coding Sequence
- ATGCTTGCACTCATCGGTGATTTTCACAGCCAAAAAAATCCTAAAGACAAATTATGCGGAAAACAATTACCCAGCACCATGCACCCTGATGGTAACATTAATGACACAAATAATGACAAACTTACGGGTAAGGAGGGTGAGGATATGAAATATAAATGTGACTCATGTGCACGTACTTATAAAAGTAAATATTATTTAACAGAGCATGTAAAGATGAAGCATTATGATTACGGGAGAACGTTTGCATGTTGGTGCGGGAAACAGTTCCGTACGCCGAAACACTTACGTTTGCATATGAGGATAAAACATGATGGTAACATTAATGATACAAATAATGACAAACTTACTGGTAAGGAGGTTGGGAAAATGAAATATAAATGTGACTCATGTGAAGGTACTTATGAAAGTAAATATTATTTAACTCTGCATACAAAGAGGATGCATTATGATTACGGGAGAACGTTTCAATGTTGGTGCGGGGAACAGTTCCGTACGCCATTTCACTTGAGAGAACACAAGATAAAACGACATGTTGCTAAAAATGAAGTATACAAATGTACCTACTGCGAGGCAGTTTTTAATGTGAAACGAAGTTTAACAGGGCATATAAAAAGTATGCATTATGATTACGGCAGGACTTTTGAATGTTGGTGCGGGAAACAGTTCCGTACGCCGGTACACTTACGTAGGCATATGAGGCGGCAGCATGATGGTAACATTAATGATACAAATAATGACCAGGTTACTGGTAAGGCAGTAGAGAAAATGAAATATAAATGTGACTTATGTGAAGGTACTTATGAAAGTAAATATTATTTAACAGAGCATATAAAGAGCAAGCATTATGATTACGGGAAACCGTTTGAATGTTGGTGTGGGAAACAGTTCCGTATTCCGCATTACTTACGTATGCATATGAGGCGGCAGCATGACGGTAACATGAATGGTACAAATAAAGACAAACTTACTGGTAAAGAAATTGAGAAAATGAAATATAAATGTGACTCGTGTGAAGGTACTTATAAAAATAAATATTCTTTAACTGCGCATATAAAGTCGATGCATTATGATTACGGGAGAACGTTTGAATGTTGGTGCGGAAAACAGTTCCGTACACCGCATTACTTACGTATCCATATGAGGCGGCTGCATGATGGTAACATTAATGGTACAAATAATGGCAAACTTACTGGGAAAGAAGTTGAGAAAATGAAATATAAATGTGACTCATGTGGAGGTACTTACAAAAATAAACATTCTTTAACACAGCATATAAAGTGTATGCATTATGATTACGGCAGAACGTTTGAGTGTTGGTGCGGGAAACAGTTCCGTTCACCGGAGTACTTACGTATGCATATAAGGCGGCAGCATGATGGTAACATTAATGGTACGAATAATGACAAACTTACTGGTAAGGAAGTTGAGAAAATGAAATATAAATGTGACTCATGTGAAGGTACTTATAAAAATAAGGATTGTTTAACTGCGCATATAAAGAAAGTTCATTATGATTACGGGAGAACGTTTGAATGTTGCGGGAAACAGTTCCGTTCACCGATATACTTACGTAAGCATATGAGGCGGCAGCATGATGGCAAAATGAACGATAGAGATAACAATAAAGTTCGATCACAAATCTTGTTCATCGAGTGA
- Protein Sequence
- MLALIGDFHSQKNPKDKLCGKQLPSTMHPDGNINDTNNDKLTGKEGEDMKYKCDSCARTYKSKYYLTEHVKMKHYDYGRTFACWCGKQFRTPKHLRLHMRIKHDGNINDTNNDKLTGKEVGKMKYKCDSCEGTYESKYYLTLHTKRMHYDYGRTFQCWCGEQFRTPFHLREHKIKRHVAKNEVYKCTYCEAVFNVKRSLTGHIKSMHYDYGRTFECWCGKQFRTPVHLRRHMRRQHDGNINDTNNDQVTGKAVEKMKYKCDLCEGTYESKYYLTEHIKSKHYDYGKPFECWCGKQFRIPHYLRMHMRRQHDGNMNGTNKDKLTGKEIEKMKYKCDSCEGTYKNKYSLTAHIKSMHYDYGRTFECWCGKQFRTPHYLRIHMRRLHDGNINGTNNGKLTGKEVEKMKYKCDSCGGTYKNKHSLTQHIKCMHYDYGRTFECWCGKQFRSPEYLRMHIRRQHDGNINGTNNDKLTGKEVEKMKYKCDSCEGTYKNKDCLTAHIKKVHYDYGRTFECCGKQFRSPIYLRKHMRRQHDGKMNDRDNNKVRSQILFIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -