Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383921.1:8342145-8349789[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.055 3 8.8 3.3 1 21 197 224 197 225 0.87

2 12 0.0011 0.06 14.1 0.3 2 23 251 272 250 272 0.97

3 12 6.7e-05 0.0037 17.9 4.3 1 23 282 304 282 304 0.99

4 12 1.7e-05 0.00094 19.8 0.7 1 23 311 334 311 334 0.97

5 12 0.0041 0.22 12.3 1.2 2 23 340 361 339 361 0.96

6 12 3.7e-07 2e-05 25.0 1.5 1 23 367 389 367 389 0.99

7 12 4.1e-06 0.00023 21.7 1.1 1 23 395 417 395 417 0.96

8 12 1.6e-05 0.00091 19.8 0.8 1 23 423 445 423 445 0.99

9 12 4.8e-07 2.6e-05 24.7 0.5 1 23 451 473 451 473 0.98

10 12 0.00044 0.024 15.3 0.2 1 23 479 501 479 501 0.98

11 12 0.00015 0.008 16.9 2.5 1 21 507 527 507 529 0.96

12 12 3e-06 0.00017 22.1 0.6 1 23 535 557 535 557 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.055	3	8.8	3.3	1	21	197	224	197	225	0.87
2	12	0.0011	0.06	14.1	0.3	2	23	251	272	250	272	0.97
3	12	6.7e-05	0.0037	17.9	4.3	1	23	282	304	282	304	0.99
4	12	1.7e-05	0.00094	19.8	0.7	1	23	311	334	311	334	0.97
5	12	0.0041	0.22	12.3	1.2	2	23	340	361	339	361	0.96
6	12	3.7e-07	2e-05	25.0	1.5	1	23	367	389	367	389	0.99
7	12	4.1e-06	0.00023	21.7	1.1	1	23	395	417	395	417	0.96
8	12	1.6e-05	0.00091	19.8	0.8	1	23	423	445	423	445	0.99
9	12	4.8e-07	2.6e-05	24.7	0.5	1	23	451	473	451	473	0.98
10	12	0.00044	0.024	15.3	0.2	1	23	479	501	479	501	0.98
11	12	0.00015	0.008	16.9	2.5	1	21	507	527	507	529	0.96
12	12	3e-06	0.00017	22.1	0.6	1	23	535	557	535	557	0.98

Sequence Information

Coding Sequence: ATGAACTTAACGATCGATTCTTTTGATAAAATATGTCGTTCGTGTTTAAGTGAATCTTCAAACTTGAAGTCACTATTTAATAGAATAGAAGGTAGTGATCGTAACCTTTTAGATGTGTTAAAATACACAACTAATGTGAACATTCGAACGGATGATATATTACCTAAACTGGTTTGTAATGAGTGCGAAGTAATAATGTGCAAGGCCGACGCATTCAAACGCCGTTGCCTCGAATCCGAACTGATTTTGATAAACATATCCATAGGTACTGAGAACGATTTCAGCGAACTGCAAATCGATAAAAAATGTCCTGTAAAAAGTGAAAACGCTGATAATGAGATTAAAAATTTATTAAACCAGCCTTCGGCCTTTACCAACAATAGTTTAAAAGACAACAACTTTGATGTAAAACAAGTAATTTTCAAAGAATTAGATGTTGAATGTGTTAGTTCAGTGGAACCGGATAAATCTCACCATGTTAATGACCTAAAAGACGTCAAGGAAGAGTTTAGTGATGGTTTCCATGACGATGACTTCCCTATGTTCCAAGATGACGACAAAAAGACATCTGAAGCACTACCTATAGAATACAAATGTGAAAAAGATGAAATTCATACATGCTACTGTAATAAAACTTTTGAAAATAAAACCAAATATGAAATGCATTTAAAACGTTACTGTTGTGATAAATATAAAGGTATATTTAAAAAATTGAATAACGTTAATGTCATAAAAATAAAAAACGAAATAGTCTGCCAGCAATGTAACCGACAATTCAATACAGTCGGAGGCTGGAAGGTGCATCAACGGTCTCACGAAAACAAGAAGCCTGTGCAGAAATCTTTCAAATGCACAATATGTTTACGTAAGTTTAAACACAACAGAACATTGGTCGCACACCTGCGTAGACATAACAAAGTACCTGTGAAATATGTATGTGATAAATGTAAGAGAGAATTTAAATACAAAGCGTATCTGGAGAATCACATAATCTCATTACATTTGGGTAACAGCCTTACATGTGACATATGTATGCAAAGTTTTACAGACAAGGAAACTTATAAAACACATAGGGACAGCCACAAAATAGACAGGTGTTATCAATGTGGTATATGTAATAAATCATTCTATATGTCGTCAACATTAAAGGAGCATTTACGGACACATACCGGTGAGAAGCCATTCTTATGTTCGGTATGCGGTAGAGGGTTTAGTCAAAGAAACAACATGCTTCAACATATGAGGAGACATCAAGGTGTCAAACCTTATAAATGTGAAAGTTGTGAGAAAAGGTTCGTATCTAAAGGCGAATTGGACGCGCATACGAGGAAACACAGCGGAGCTCATCCCTTCGTGTGTGATGAATGTGGGAACGGCTTCACCACTTCAAGCTCTCTTGTCAAACATCGAAGGACCCACACAGGCGAGAGGCCGTACGCTTGCGACCTGTGCCCGATGCGGTTCGCGGCGACCGGCACCTTGAAGAATCACCGTCGGACGCACACCGGGGAGCGGCCCTACCAGTGTCTCTACTGCGAGAAGGCCTTCGTACAGAAAAATGACCTAAGTTCCCACATCCGGTGTCACACCGGTGAGCGTCCGTACGTGTGTACACACTGCGGCCAAAGGTTCCGCAAGCCGGCCGGGCTCAAGGCGCACGCGCGGCTTCACCCGCAAAACGCGCCGTCTCTACCACCGCCAGTTCATAATCAAATACTTTTATCTACGCACTGTGAAACAATAAAATAG
Protein Sequence: MNLTIDSFDKICRSCLSESSNLKSLFNRIEGSDRNLLDVLKYTTNVNIRTDDILPKLVCNECEVIMCKADAFKRRCLESELILINISIGTENDFSELQIDKKCPVKSENADNEIKNLLNQPSAFTNNSLKDNNFDVKQVIFKELDVECVSSVEPDKSHHVNDLKDVKEEFSDGFHDDDFPMFQDDDKKTSEALPIEYKCEKDEIHTCYCNKTFENKTKYEMHLKRYCCDKYKGIFKKLNNVNVIKIKNEIVCQQCNRQFNTVGGWKVHQRSHENKKPVQKSFKCTICLRKFKHNRTLVAHLRRHNKVPVKYVCDKCKREFKYKAYLENHIISLHLGNSLTCDICMQSFTDKETYKTHRDSHKIDRCYQCGICNKSFYMSSTLKEHLRTHTGEKPFLCSVCGRGFSQRNNMLQHMRRHQGVKPYKCESCEKRFVSKGELDAHTRKHSGAHPFVCDECGNGFTTSSSLVKHRRTHTGERPYACDLCPMRFAATGTLKNHRRTHTGERPYQCLYCEKAFVQKNDLSSHIRCHTGERPYVCTHCGQRFRKPAGLKAHARLHPQNAPSLPPPVHNQILLSTHCETIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00113501;
90% Identity: -
80% Identity: -