Basic Information

Insect: Saturnia pavonia
Gene Symbol: -
Assembly: GCA_947532125.1
Location: OX383908.1:2324574-2328123[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8 4.4e+02 1.9 1.2 1 23 30 52 30 52 0.88

2 20 5.3e-06 0.00029 21.4 0.9 1 23 75 97 75 97 0.99

3 20 4.1 2.2e+02 2.9 1.5 5 23 105 124 102 124 0.93

4 20 0.0015 0.084 13.7 0.1 1 23 200 222 200 222 0.98

5 20 0.019 1 10.2 0.6 2 23 229 251 228 251 0.95

6 20 0.017 0.94 10.4 4.0 2 23 258 279 258 279 0.98

7 20 1.7e-07 9.1e-06 26.1 0.2 1 23 285 307 285 307 0.98

8 20 2.4e-05 0.0013 19.3 1.5 1 23 313 335 313 335 0.99

9 20 4.4e-06 0.00024 21.6 3.3 1 23 342 364 342 364 0.98

10 20 0.0077 0.42 11.4 0.3 1 23 370 393 370 393 0.96

11 20 1.7e-06 9.6e-05 22.9 0.8 1 23 399 422 399 422 0.96

12 20 0.0038 0.21 12.4 6.1 1 23 427 450 427 450 0.96

13 20 0.00087 0.048 14.4 2.9 1 23 455 477 455 477 0.95

14 20 0.0065 0.36 11.7 0.3 2 21 481 500 480 501 0.94

15 20 0.026 1.4 9.8 3.1 2 23 505 527 504 527 0.96

16 20 3.8 2.1e+02 3.0 2.3 2 19 538 554 537 559 0.82

17 20 1.7e-05 0.00094 19.8 3.1 1 23 565 588 565 588 0.98

18 20 0.049 2.7 8.9 1.4 2 21 593 612 592 613 0.92

19 20 0.0028 0.16 12.8 1.2 1 23 620 642 620 642 0.97

20 20 0.00015 0.0081 16.8 1.3 1 23 648 671 648 671 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8	4.4e+02	1.9	1.2	1	23	30	52	30	52	0.88
2	20	5.3e-06	0.00029	21.4	0.9	1	23	75	97	75	97	0.99
3	20	4.1	2.2e+02	2.9	1.5	5	23	105	124	102	124	0.93
4	20	0.0015	0.084	13.7	0.1	1	23	200	222	200	222	0.98
5	20	0.019	1	10.2	0.6	2	23	229	251	228	251	0.95
6	20	0.017	0.94	10.4	4.0	2	23	258	279	258	279	0.98
7	20	1.7e-07	9.1e-06	26.1	0.2	1	23	285	307	285	307	0.98
8	20	2.4e-05	0.0013	19.3	1.5	1	23	313	335	313	335	0.99
9	20	4.4e-06	0.00024	21.6	3.3	1	23	342	364	342	364	0.98
10	20	0.0077	0.42	11.4	0.3	1	23	370	393	370	393	0.96
11	20	1.7e-06	9.6e-05	22.9	0.8	1	23	399	422	399	422	0.96
12	20	0.0038	0.21	12.4	6.1	1	23	427	450	427	450	0.96
13	20	0.00087	0.048	14.4	2.9	1	23	455	477	455	477	0.95
14	20	0.0065	0.36	11.7	0.3	2	21	481	500	480	501	0.94
15	20	0.026	1.4	9.8	3.1	2	23	505	527	504	527	0.96
16	20	3.8	2.1e+02	3.0	2.3	2	19	538	554	537	559	0.82
17	20	1.7e-05	0.00094	19.8	3.1	1	23	565	588	565	588	0.98
18	20	0.049	2.7	8.9	1.4	2	21	593	612	592	613	0.92
19	20	0.0028	0.16	12.8	1.2	1	23	620	642	620	642	0.97
20	20	0.00015	0.0081	16.8	1.3	1	23	648	671	648	671	0.95

Sequence Information

Coding Sequence: ATGCAGCATGACGTCATCATTCAACAAAATATAAAAGGTTACAAAAAGTTAATGACGCAGAATGTAGTTTTGGATCGTGTTAAAATATATGATTGTAAGGATTGTCTACAAGGGTTTCTTAGTCACAGGGACTATGTATTGCATCAAGTGCAACACACGCACCATAAAGTATTGAACTCTAAGGATCGGTACTATAACAAAGATTTCGATTCTTTGAAAGTGTATAAATGTGAAGAATGCCACCTAAGATTTGTATTAAAAAGTACATTGGAAGCTCACATGATGGTTCATGCTCCTTACCCGCACGTCTGCCATTGCGGTATCGGTTACTATAGCAGTAGAGACCTCGGCTCTCACAAGAAGTTGGTACACAAAAATGAAAACGTTGATATAAATCAACAACTTTCCGTTTCCGAAGAGGATGTTACCCGTGCGTCTTCTCGTAAAGAATTAAACGTCAAAAGAAAATTCAACATAGCACCGAAATTGAAAGCTGGTTTAGTGTATAAACAAAAGTCTAAACGTAGAAAGAAAGGGAAAAATGGGAACCGTTCTAATAATGGTCGATTTACAGAAGAGGAAGATGCTAACGGCGACTACGTGTGTCCAGTATGTGCAAAAGCATACAATCAAAAGGTCAAGCTCTTAGGACACTTATCCAGTCATTGTAGTAGCAAGGATTTAAAATGTGTACTATGTGAGAAAAAATTCACCCAAGTGATCAGCATCAAGATACATTTGATGAGAAGGCATTCGGGAATAAAAGATGAGAAATGTAGTTACTGTGATAAAGTATTTTTTTGCCGTTTTAGCCTTGCAACTCACGAGAGAACCCACACTGGTGTCAAGCCTTACGCTTGCAATTACTGCAATAAACCTTTCAACGACCCGTCTGCGTTGAAGCGACACGAGAGGATCCACACAGGCGATAAACGTTACAAATGTCAGCACTGTACTAAGGCGTTCACTGACGCTGGCTCCGCTATAAGACACCGCCTAACACACGTAACCAACGGTCAGAAATACACATGCGAAATATGCGAAAAAAAATTCACAACGAAGATATATCTGAAAAGCCACATGCATGTGCATAGTCTGGAAAAGAACTATCAGTGTGCTTTATGCTCAAAGTGGTTCTCTTTAAAACAATATTTAAAGGCACACATTCAAGCAGTGCATTTTAAACATAGGAGATTTGAATGTGATCATTGCGGTAAGAAGTTTGAAGTAAAGGATGGACTTCAAAGACATATCGAGAGCATGCATAACAATATTTATTACAAATGCGATGATTGCGGTAGAAAATGTAAAACTTATTGTGGTTTGAGGCAACATAAAAATAATGTTCATAGCAGCCGTCGATTCCTATGCAACGACTGCCCCAACCAGTACACGACGAAACATGAACTATCCCGCCATGTAAAAAAACATCTCAATATTAAATGCGAAGTATGTTCCGCTCTATTCCGATCCAACAGCAAGTTAGAGAAACACAAAAAAATCGGCTGCATCAAGTGCCTTAAATGTAACAAATTTTTCAAGGACGTTACAAACAGAAAGTATCATTACAAAATATTCCATTCAAAACGAATCAAACGAATAAAACGTGATAAATGCAATGTTTGCGACAAGTACTACAGCGTGGGTACATTGAGTAAACATTGTGCGAAGTTTCACAGCGACGTCAAAAAATACCAATGTGATCACTGCAAACTATTTTTTCCTACGAAGGACTCGTTAAGATCTCATATTATGAAACAACATATGCTTGCACTTTACTGCGACAAGTGTCTTAAACCGTTCTACACCAAATCCTTATTCGACAGTCATAAGAAAAAGGGTTGTCTAATTAAATATTATCCCTGTGATATATGTATGAAAAACTTCACTTCTTTATGTAGTTTGAAATCACACCTAGTTGTCCATTGTGATAAATATAATTACGTGTGTGACATTTGCAATGACAAGTTTAAGCGTGAGAGCTCGTTAAAACGACATTTTAAACTTGTTCATGGGATTGTATGA
Protein Sequence: MQHDVIIQQNIKGYKKLMTQNVVLDRVKIYDCKDCLQGFLSHRDYVLHQVQHTHHKVLNSKDRYYNKDFDSLKVYKCEECHLRFVLKSTLEAHMMVHAPYPHVCHCGIGYYSSRDLGSHKKLVHKNENVDINQQLSVSEEDVTRASSRKELNVKRKFNIAPKLKAGLVYKQKSKRRKKGKNGNRSNNGRFTEEEDANGDYVCPVCAKAYNQKVKLLGHLSSHCSSKDLKCVLCEKKFTQVISIKIHLMRRHSGIKDEKCSYCDKVFFCRFSLATHERTHTGVKPYACNYCNKPFNDPSALKRHERIHTGDKRYKCQHCTKAFTDAGSAIRHRLTHVTNGQKYTCEICEKKFTTKIYLKSHMHVHSLEKNYQCALCSKWFSLKQYLKAHIQAVHFKHRRFECDHCGKKFEVKDGLQRHIESMHNNIYYKCDDCGRKCKTYCGLRQHKNNVHSSRRFLCNDCPNQYTTKHELSRHVKKHLNIKCEVCSALFRSNSKLEKHKKIGCIKCLKCNKFFKDVTNRKYHYKIFHSKRIKRIKRDKCNVCDKYYSVGTLSKHCAKFHSDVKKYQCDHCKLFFPTKDSLRSHIMKQHMLALYCDKCLKPFYTKSLFDSHKKKGCLIKYYPCDICMKNFTSLCSLKSHLVVHCDKYNYVCDICNDKFKRESSLKRHFKLVHGIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -