Spav008421.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Saturnia pavonia
Gene Symbol
-
Assembly
GCA_947532125.1
Location
OX383908.1:11690869-11725101[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 7e-05 0.0038 17.9 2.4 1 23 424 446 424 446 0.98
2 20 0.0097 0.53 11.1 0.8 1 20 452 471 452 474 0.94
3 20 2.5e-05 0.0014 19.3 5.6 1 23 493 515 493 515 0.98
4 20 9.9e-06 0.00054 20.5 4.9 1 23 521 543 521 543 0.99
5 20 4.4e-05 0.0024 18.5 5.3 1 23 549 571 549 571 0.97
6 20 1.4e-05 0.00074 20.1 7.3 1 23 577 599 577 599 0.97
7 20 8.5e-07 4.7e-05 23.9 2.9 1 23 605 627 605 627 0.97
8 20 0.00012 0.0066 17.1 6.7 1 23 633 655 633 655 0.97
9 20 0.00012 0.0066 17.1 6.5 1 23 661 683 661 683 0.97
10 20 5.8e-07 3.2e-05 24.4 1.9 1 23 689 711 689 711 0.98
11 20 5.9e-05 0.0032 18.1 7.9 1 23 717 739 717 739 0.98
12 20 9.9e-06 0.00054 20.5 6.4 1 23 745 767 745 767 0.98
13 20 1e-06 5.6e-05 23.6 4.1 1 23 773 795 773 795 0.98
14 20 1.2e-05 0.00069 20.2 6.3 1 23 801 823 801 823 0.97
15 20 8.7e-06 0.00048 20.7 7.1 1 23 829 851 829 851 0.97
16 20 3.6e-06 0.0002 21.9 6.0 1 23 857 879 857 879 0.98
17 20 2e-05 0.0011 19.6 8.0 1 23 885 907 885 907 0.97
18 20 2.9e-06 0.00016 22.2 4.1 1 23 913 935 913 935 0.96
19 20 0.00098 0.054 14.3 0.3 1 23 942 964 942 964 0.96
20 20 0.17 9.4 7.2 5.7 1 23 971 993 971 993 0.99

Sequence Information

Coding Sequence
ATGAATTCAGATCATCACAATATTAATACGGGTGGCGGCCAGCCTCCGGGGAGTGCGGAGTCGCAGAATCAAAGAGTGTCAGGAGCACAGCAACAACATCAATCTAATTTGCCGCCAACCACATCTGCTACCGACTTGAGAGTCAACTCTGCTGCTGTAAACGTCGCTTTGTCTAGCGTTGCAAAATATTGGGTATTTACAAATTTATTCCCTGGGCCTATACCACAAGTTTCTGTGTACGGTTTGCCAACAGGAGCCCGAATAGAAAACGGAAAACCAGTACAGGACCTTGGTCAAGCACATGCAAGTATATTAAATGGTGATCCAAATATCATATTAGGACACCATGGTGGCCAGTCCCAGGTTACAGTTTCTGCTGCAGGAACTCAACAAATACCAGTTTCACAAATCATTGCCACACAGTCTGGACAAACACATGAGGGCTTAGTTGGTCACAGCCAACAGCAAGACCTAAACGCGCAACAAGCTTCAGGTACCGGCGCACAGGGCTCTGTAAACACAGGTCAAGCCCACCAGCAGGTACCCAATAACCGGGTGGAGTTTGTACAACACCATAACATAGATATGGGGCACCATTCTCAACAGCATTTGATGCAACAGCAACTGATGGCTTCAACACGACCCGAGCACAATAATCAGCAGATTCAACTGACTGTCAGTGAAGATGGAATAGTAACTGTAGTAGAGCCTGGTAGTGGAAAAATGGTTGACAAAGAAGAACTACATGAAGCAATCAAACTTCCAAATGATCATACATTGACTGTACATCAGTTACAACAATTTGTTGGTCAACAGGTGATAGACAGCGTGGTTCGTATCGAGCAAGCCACGGGCGAGCCAGCCAACATACTGGTGACACATAACCCTGACGGCACCACGTCCATCGAGGCGAGCGCCGCTGATCCCCTTATAGTCAAAGATGAGAAGAACTCATCCAAAATGGAGACAACACCGTTTGCTATACCGGCTGAAATAAAAGATATAAAGGGCATTGATCTAAAGACTGTGGGAGCAATGGGGATGGAGGGCGCCGTGTTGAAAATATCAGCGGGTGCATCCGAGCATGATATGCACGGCATGTATAAAGTTAACGTTGAAGATCTATCACAGTTATTAGCTTACCATGAGGTCTTTGGGAAAATGAATACAGAAGGTCAATCACAGCAACAGACTAAGGCACTAAATGAAGTGGAAGTTGAGCCAGGAACCAGCGCTGCAATGCCTGAAAATGATTCATCACCTGGTCACCACACATGTGATATCTGTGGCAAGATATTCCAATTCCGGTATCAACTAATTGTTCACAGGCGATACCATGGTGAAAGTAAACCATTCACTTGTCAAGTCTGTGGGTCTGCTTTCGCTAACCTTGCTGAACTATCGAGACATGGAAAATGCCATCTTGCCGGAGACCCTGCAGAACGGCACGCGAAGCGGCTAGCGCAGGACAAGCCGTACGCGTGCACAACTTGCCACAAAACCTTCTCACGTAAGGAGCATCTAGACAATCACGTCAGAAGCCACACAGGAGAAACCCCCTATAGGTGCGAGTACTGCTCGAAAACATTTACACGTAAAGAGCACATGGTGAACCATGTACGTAAGCACACGGGCGAGACGCCACACCGCTGCGACATCTGTAAGAAGAGTTTCACACGGAAAGAACATTTCATGAATCATGTCATGTGGCACACAGGTGAAACGCCTCATCACTGTCAAATATGCGGTAAGAAGTATACTAGGAAGGAGCATTTAGTGAACCATATGCGGTCTCACACGAACGATACGCCCTTCCGATGTGAACTGTGCGGCAAGTCCTTCACCAGGAAGGAACACTTCACCAATCACATCTTGTGGCACACCGGCGAAACACCCCATCGATGTGACTTCTGTTCGAAAACATTCACGCGCAAGGAGCACCTGTTGAACCACGTGAGGCAACACACGGGCGAGTCGCCCCACCGCTGTAACTTCTGCTCGAAGTCGTTCACTAGGCGCGAGCACCTCGTGAACCACGTCCGTCAGCACACCGGGGAGACGCCCTTCCAGTGCGGTTACTGCCCGAAGGCTTTTACAAGGAAGGATCATTTAGTGAATCATGTCCGTCAGCACACCGGCGAGTCCCCGCACAAGTGTTCGTTCTGTACGAAGTCGTTCACGCGGAAGGAGCACCTCACGAACCACGTGAGGCAGCACACGGGCGAGTCGCCCCACCGCTGTTCCTACTGCGCTAAGTCGTTCACGAGAAAGGAACACCTTACGAATCATATCAGACAGCACACGGGTGAAACGCCACACAAGTGCACGATATGCCCGCGCGCGTTCTCGCGGAAGGAGCACCTGAACAATCACATCCGGCAGCACACCGGGGCGACGCCGCACTCCTGTACTTACTGCAACAAGAACTTCACGAGGAAGGAGCACCTCGTTAATCATATCCGGCAACACACAGGCGAAACTCCTTTCAAATGCACATACTGTTCAAAATCGTTTTCACGTAAAGAACATTTAAACAACCACATTCACCTGCACACTGGAGAGACGCCGCACAAATGTCCCTTCTGCACTAAGACATTTTCAAGGAAGGAACACCTTACGAATCACGTCAGGATCCATACCGGTGAGTCTCCGCACCGATGCGAGTTTTGTCAAAAGACATTCACACGCAAGGAACATCTAACAAATCACATGAAGCAGCACACTGGAGACACAGCACATGCGTGCAAGATATGCTCCAAGCCCTTCACTAGGAAAGAACATCTTGTTACTCACATGAGATCGCACAGTTGCGGTGAGCGTCCGTACAGTTGTGCGGAATGTGGGAAATCGTTCCCGTTGAAGGGCAACCTGCTATTCCATGAACGTTCTCACAACAAGGGCGTAAGGCCGTATCGATGCGACGTTTGCTCCAAAACCTTCCTGTGTAAAGGACATCTAGTTTCACATCGGCGTACGCACCAGGACGCGGGAGAGCCGCCCGCAGCGGCCGAGACGCCAGCGGTCACCGAAGATTGTAATGATTGTAACAAGTGCGTTAAAGTCGAAATCGATGTGCCGGAGAGAAAACACGAAATAAGAGCGTCAGTCGATAACCGACCTACTGAGAATAATGTCGCACAAAATCCACAAAACAGTGCTGCTACGGTAATGCAAATAACCAACCAAGTGAACCAGGTGAGAACCGTTGCGGCAACGAGTGCCCAAGGGGTGACGTCCAGCACATTTACGCACACCCCTAGTACTCAGCACCACGCCGGCTCGTCCATAGCGCATCATCCAGTAACAGTTAATTACTAG
Protein Sequence
MNSDHHNINTGGGQPPGSAESQNQRVSGAQQQHQSNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGARIENGKPVQDLGQAHASILNGDPNIILGHHGGQSQVTVSAAGTQQIPVSQIIATQSGQTHEGLVGHSQQQDLNAQQASGTGAQGSVNTGQAHQQVPNNRVEFVQHHNIDMGHHSQQHLMQQQLMASTRPEHNNQQIQLTVSEDGIVTVVEPGSGKMVDKEELHEAIKLPNDHTLTVHQLQQFVGQQVIDSVVRIEQATGEPANILVTHNPDGTTSIEASAADPLIVKDEKNSSKMETTPFAIPAEIKDIKGIDLKTVGAMGMEGAVLKISAGASEHDMHGMYKVNVEDLSQLLAYHEVFGKMNTEGQSQQQTKALNEVEVEPGTSAAMPENDSSPGHHTCDICGKIFQFRYQLIVHRRYHGESKPFTCQVCGSAFANLAELSRHGKCHLAGDPAERHAKRLAQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCEYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLVNHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRQHTGETPHKCTICPRAFSRKEHLNNHIRQHTGATPHSCTYCNKNFTRKEHLVNHIRQHTGETPFKCTYCSKSFSRKEHLNNHIHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHMKQHTGDTAHACKICSKPFTRKEHLVTHMRSHSCGERPYSCAECGKSFPLKGNLLFHERSHNKGVRPYRCDVCSKTFLCKGHLVSHRRTHQDAGEPPAAAETPAVTEDCNDCNKCVKVEIDVPERKHEIRASVDNRPTENNVAQNPQNSAATVMQITNQVNQVRTVAATSAQGVTSSTFTHTPSTQHHAGSSIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01030446;
90% Identity
iTF_01316574;
80% Identity
-