Spav010883.1
Basic Information
- Insect
- Saturnia pavonia
- Gene Symbol
- -
- Assembly
- GCA_947532125.1
- Location
- OX383920.1:10001736-10021532[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 45 0.03 1.6 9.6 1.1 1 23 232 254 232 254 0.96 2 45 0.22 12 6.9 0.1 2 23 283 305 282 305 0.94 3 45 0.013 0.7 10.8 0.2 2 23 326 348 325 348 0.94 4 45 6.2e-05 0.0034 18.0 1.3 2 23 354 376 353 376 0.95 5 45 0.0027 0.15 12.9 0.8 1 23 381 404 381 404 0.95 6 45 2.8 1.6e+02 3.4 0.1 2 23 407 429 406 429 0.94 7 45 0.011 0.59 11.0 1.4 2 21 436 455 435 456 0.93 8 45 0.014 0.76 10.6 0.3 1 23 516 539 516 539 0.93 9 45 0.14 7.5 7.5 0.1 3 23 568 589 566 589 0.92 10 45 0.23 12 6.8 0.2 3 23 613 635 612 635 0.94 11 45 0.0015 0.084 13.6 0.4 3 20 642 659 640 663 0.90 12 45 0.027 1.5 9.7 0.4 1 23 668 691 668 691 0.97 13 45 0.0016 0.091 13.5 0.3 2 23 697 719 697 719 0.92 14 45 0.00013 0.007 17.1 4.7 1 23 723 746 723 746 0.97 15 45 0.00016 0.0087 16.7 0.4 2 23 753 774 752 774 0.96 16 45 0.031 1.7 9.5 2.4 1 23 780 802 780 802 0.97 17 45 0.073 4 8.4 2.5 1 23 841 863 841 863 0.97 18 45 0.011 0.58 11.0 1.3 2 23 934 956 933 956 0.95 19 45 0.046 2.5 9.0 6.4 1 23 961 984 961 984 0.95 20 45 0.0049 0.27 12.1 4.0 1 23 988 1011 988 1011 0.97 21 45 0.0097 0.53 11.1 1.0 2 23 1014 1036 1013 1036 0.96 22 45 2.9 1.6e+02 3.3 0.3 2 19 1042 1059 1042 1061 0.93 23 45 0.0052 0.29 12.0 2.3 1 21 1111 1131 1111 1134 0.90 24 45 1.3 71 4.4 0.1 2 23 1163 1185 1162 1185 0.94 25 45 0.00043 0.024 15.4 0.4 1 23 1207 1230 1207 1230 0.96 26 45 2.6e-06 0.00014 22.4 0.3 1 23 1235 1258 1235 1258 0.95 27 45 0.0015 0.081 13.7 1.0 5 23 1266 1285 1263 1285 0.93 28 45 0.0039 0.21 12.4 1.9 2 23 1291 1313 1290 1313 0.95 29 45 0.00072 0.04 14.7 3.5 1 23 1317 1340 1317 1340 0.97 30 45 0.03 1.6 9.6 0.6 2 23 1347 1368 1346 1368 0.96 31 45 0.048 2.6 8.9 2.3 1 23 1374 1396 1374 1396 0.96 32 45 0.00027 0.015 16.0 2.7 1 23 1439 1461 1439 1461 0.96 33 45 0.089 4.9 8.1 0.8 1 23 1533 1556 1533 1556 0.96 34 45 0.00051 0.028 15.2 0.5 1 23 1561 1584 1561 1584 0.96 35 45 0.0087 0.48 11.3 6.0 1 23 1589 1611 1589 1611 0.98 36 45 6.8e-05 0.0037 17.9 1.0 2 23 1614 1636 1614 1636 0.97 37 45 0.42 23 6.0 2.1 1 21 1642 1662 1642 1663 0.93 38 45 1.5 81 4.3 0.8 1 23 1715 1738 1715 1738 0.95 39 45 2.4e-05 0.0013 19.3 0.2 2 23 1811 1833 1810 1833 0.96 40 45 0.00012 0.0066 17.1 0.3 3 23 1840 1861 1839 1861 0.94 41 45 0.056 3.1 8.7 7.5 2 23 1866 1887 1865 1888 0.93 42 45 0.0043 0.23 12.2 4.0 1 23 1893 1916 1893 1916 0.97 43 45 8.3e-05 0.0046 17.6 4.2 1 23 1920 1943 1920 1943 0.97 44 45 0.00093 0.051 14.3 0.3 2 23 1950 1971 1949 1971 0.96 45 45 0.0003 0.017 15.9 0.4 1 23 1977 1999 1977 1999 0.97
Sequence Information
- Coding Sequence
- ATGGAGTTTGATGAGATAGTAGTGAAAGAGAGCCCCGGGCTTTGCCGGTGCTGTCTCTCTGAAGGATGCTACAAAGATTTGGGAACGGAGTATTCTTGGATGAATGAAAATGAAGTTTATGCAGACATGCTGCTGGAATGCTTCGATATAAGTATCACACAGCATAATGAAGGCCCTAATGGACCCAGTCGGTTGATCTGCGAGGTGTGTATTACGAGGCTCCGAGACGCTTGCAACTTCAAGAAACAAGTTCTGGAGTCTGAGAAGAGGTTTATAGACATGGTAGCAAGAGGAGAGTTCAGGCCAAAAGTACTGATTTACCAGACTCAGATGAAAGCCGAGGAGAATACTGAAGGGGTAACAGCAGAGGACGTGGAGTATCTCGATGATGATATAGATTTCGGTGAAGATGAACCAGCGAAAAGCGATGAAACGCCAAACGTGACAGACAGTATAACGGCCGAGCCATTACCGGTGAAGGGGAAACGCGGACGGCCGCGTAAAACCGCCGACGTGAAAACCGTGAAGAAAATGAAGGTTCTTGATGAGAAACCGAAAACTTCGAAAGCTGTATCGAAAGATATAAAACGAAGGAAATATAAAGGATGTGAATCTTCCTCGATGAGGAGGAGAAAGAATCTTCAAATCCTCTTCAACAATACCTCCATCATACCGTTTAAGTGGCGCGGGAAGTATCTCTGCTTTTACTGCAGTAAAGATGTCGCCGAATACTCGGAACTCAGAAAGCACACGAAATCGCACGGTAGTTGTTCCACTAAGGACCACTCCTTAAAGGTCCTCAAGGGAGGTCAGAATATGGAAATAAAGATCGACGTGTCGGATATCACTTGCGAGATCTGCAGTGAACCGTTTCCAAACATCGACGAGATTTTGAACCATTTGCATGTAAAACACAAGCTGGAATACGATAGAGGTGTTGACATGGCTATCGAGGAATACAGACTGGCGGACCTAACATGTTTGGTCTGCGGTGAAAGGTTCACGTACTTCGGTTATTTAGTGTCGCATGTGAACAATACTCACCCTAAAAATTGTCTCGTCTGCGATGATTGCGGTCAGAAGTTTAATAAGAAGCGTGATCTGTTCTCGCATATGAAGAATTACCACCGCGAAGGCGGATACCAGTGTGAAATTTGCCCACAGAGCTTTAGCTCTCTCAACATCCTGAGGAAACATAGGAGTAACCGTCATATGACCAGATGCGGGATCTGTCAGCTGAAGCTTCCATCGGCCGCTCTAAAACAGAAACACATCGACATGGAACATCCCGATGACGGCTCGCTGCAATGTGATAACTGTGATAAGGAGTTTCACACGAAACAAGGACTCAGGATGCATAGTCGTAAGTGCAAAGGCGACGGTGATTTCTTCGAGATCGCATTCAAAAAGGAAGACAGTACGATGGATCTGGATCAGAATTACGAGGATCTCGTCAAAAGGCCAAGCGTGAAGCAAATTAGAGAAAATATAGTCATCGTTATAAACATGTCGACAGCGATACCCTTTAATTTTTACAAGAATAAGTTTAACTGTTTCTATTGTTCTAAGGACTTTCCCGATTCTGATGCGATGCGCGAACACACCGTAATGGAACATCCTGTTTGCGATGTCAAGCAAAAATGCATACGGAAGTGTAGAGAGTCAGTCGCTTGCGTCAAAATTGATATTTCCTCACTCGCTTGCAAAATTTGCTTCGAATCGATATCCGACTTGGACAACCTTCTCGATCATCTGATAGGAAAACATGATGCGAATTATGATAAATCGATCACGACCTGTCTCCAACCTTACAAGCTGATAAAAGATCACATGGCTTGCCCGAACTGCCCGGGCGAGGCGTTCAGATTCTTTGGAACTTTATTAAAACATATGAATAAGAAACATACGAACAACAATATTATATGCGTGTACTGCGGAGAAACGTTCAGGAGAGACCAAAACCTTAGGGTTCACATTTGGAGGCATCATAGGGACGGCAGATTCAAATGCAATATATGCGGTGCTGAGTGTAATATACCGTCTAGATTATACATGCATATGGCTAAAGCGCACGGTGTTAGAGCGGCGAAATGTCCTAAATGCCCGGAGACCTTCGCTACACAGTACCTGAGGCAAAAGCATTTGATAGATGCCCACGACTCTGGGCATAAGTGCTCGTATTGCGGGAAACTCTTCACGAGGAACTCCTTCATGCGTGATcatatcagacggacgcacctaaaggagaagaatgttgaatgttcgatatgcggcatgaagtttttcaacaatatccttttgaggaggcacatggtgaaacatagcggtgagaagaattttcactgcgaagtatgcggcgagaggttcttctggaggaagagtttgaggactcatatggttaggcataataaGCATCTCGATGCGCCGGCAAAGATGAACAGTGCTAATTACTACAGAAGGAGGAATCTACAAATACTGTTCAACAATACCACGTTGATGCCGTTTAAATGGCGAATGAAGTACATGTGTTTTTATTGCGGCCGCGATTTAGGAGACTATTGCGATCTTAAAAAGCATACTAAGGGCCACGGTGATTGTTCTGATAGTGATAGGGCGATCAGACTGGTCAAAGCTGCCGATAGTGAAGTCAAAGTAGACGTTTCAGATTTAACTTGCGAGTTATGTATGACGCTCTGCGAAAACTTTGATGAAATCGTTTCACATTTAATCGCAAAACACAATTTGCCTTACAATAAAGACGTCGATCTAATGATCACTACTTACAGATTGTCTGATCTTAAATGCCTCTCTTGCGAACGGAGCTTTAGGTATTTCCGTCAACTAGTCTCCCATATGAATAATGAACATCCGAATAATTGTTTTCTGTGCCACGAGTGTGAGCATACCTTTAATAAGAAGAGAGACCTTGATCATCACGTTAGAGTGTACCATAGGAAGACATATACATGTCTCAAATGTTTTTCGAATTTCACTTCAAACTCTGAACTTCAGCATCATCGTCGGAATGCGCACATTTCCACTTGTAATATTTGTTTTAAAACATTCTCTTCGGAGGTACAAAGGTTGGGCCACATGAAACGTGATCACGATACAGATGGCGCTGAATGCGGGTTTTGTCATAAAGTTATGACCACCAAACAAGGTTTTTTACGTCACGCAGCGCAGTGCACAGTCAAAGAGTACAAACGCCCCGAAACTATTGTTGTGGAAGACGACGATAGGAAACAGTCTGTCAAAGAGATTAGGAACGATATCGCTTCTGTACTGAACAAGTCAACAGCTTTGCCCTTCAAATATTTCATGAATAGGTTTAGATGTTTCTACTGTTCGAAAGACTTCCCGCGATGTGATGCTTTGAAACAGCACACTGTCGCTGAACACCCGCATTGCGACATCACTTTTAAATCTATGAAGCTTCGTAACAGATATGAAGGGATGCAGATTAAAGTGGACACCTCCAGCCTGTCCTGCAAGCTTTGCTTTGAAACTTTAGAAGACTTGGATGGTTTATTCGAACATTTGACGTCGGAACATAAGACTCGTCTCGATAGGTCCGTGTGTGAACATATGCAAGCTTTCAAATTAATCGAGGATAATTTCCCATGCCCATTTTGCGGTGAAGTGTACAGATACTTCAGCTTGCTCTTAAGGCATGTCAGTAGAACGCATACTGATAATAAGTTTATATGCACATACTGTGGTAAATCATTCAGAACGAATCCGAGCCTGAGGGCACACGTTGTGACTTGGCATAACTTTGGCAGACATAAATGCGACTGTGGGTTGGTGTTTACCACGAATAATAACCTCAAAGTGCATATGGGGAGAGCGCATGGCACGAAGGTTGTCCAGTGTACCGAATGCCTGGAGAAATTCACAACGCATTACTGGATGAAGAGGCACATGTTGGAAACCCATGGTGCCGGTCACAAGTGTTCCCATTGCGGTAGAGTGTACGTGAAGAACTCCGCAATGGTGAATCACGTCAGGCGGTTCCATCTAAAGGAGAGAAACGTCGAGTGTACCGTCTGCTTTGAGAGATTCTTCGACGCGCAACGATTGAAAACGCACATGGTGAAGCATGTCGGTGAACGGAACTTTCATTGTGATATTTGTGGGAAGAAGTTTCTGTGGAAGAAAAATCTTAGAGGGCACATGTCGTCACATAATAAACTTGTAAATAGTAATAATGAATACGGGCCCTACGAAGGGTGCACGTCTGAGCGTCGCAGGAAAAACTTGAAAACCCTCTTCAACTATACAACCGTAATGCCATTCAAATGGCGAGGGAGGTACCTATGTTTCTATTGCGGTAAAACGTACACGGATTACGTGGAGTTTAAAAAGCACACTAAATCCCACGGGCCTTGCACCACGAAAGATTACTCGTTGAGAACGATAAAAGGGAATCACGTTGAGATAAAAGTAGACGTATCAGAAGTGGCTTGTGATATTTGCATAGAACCGTTCGAGAGTCAATCGGTCAGTGAAATTATTGATCACCTGATCATCAAACACAATTTAGAATATGACAAAAGTATAGACATACCATTCCAGGAGTACAGACTGGAAGACTTCCGTTGTCTTTTCTGTGAACAACAGTTCTCCTATTTCGGATATTTAGTCAATCATGTTAATAACGCTCACCCGCAGAACAGCTACATTTGTGATGAATGCGGTGTTAGTTTCAATAAGAAACGGGACCTTGCGTTGCACTTTAGGAATTACCATCGACAAGGTGGTTATCCTTGCGATCAATGCTTACAAAGCTTCACATCATTTCATCTATTACGTCGACATCAAAAACATCACTTTCGACAGTGTAACAATTGTGGAATGCGTTTTTCGTCTCTTACTTTCCTACAGAAGCACATGCAAGTTGACCATCCTGACGACGGCAGCTATAAATGTAACTACTGCTCTAAGGAGCTGCATTCCACTCAAGGTTTAAACCAGCACAGAAGCAAGTGCAAGGTGAAACTTCTGGCTCACGAAGTACCGAGTAGTCTGCCAGTTGAAAACGTTGAAGCCCAAAAGAATTTAAATCTACAACAAATGCGTCAAAATATCCAGTGCATTCTAAATATGTCGACAGCAACGCCTTTTAAGTTCTTCTCGAAGTTCACCTGCTTCTATTGCTCGTCAAAGTACGTGGAGTTTGAGGAGTTGAGAGATCATACCGCGTCGGAACATCCAGTCTGTGACCTTAAATCGAAATATATGAGCAAATGCAAAGGGGAACGTGTGACAGTGAAGATTGACGTGTCTGTTCTTGCGTGTAAAGTGTGCTGTGTGCCGATGGACGACTTGGAATCATTAGTGGACCATCTGATAGCGGAACACCAAGCGAATTACGATAAATCAGTAAAGGGCTGCGTGGAACCTTTCCGGATCGTTAAAGACAATATTCCTTGTCCGATTTGCTCGACAGTATTCAGATATTTTAGCACCCTTCAGCGACATTTGAATACCGTTCATAGCAACAACAACAGGATATGCGATTTCTGTGGCAAAACTTTCAGGAATGGGGCCAATTTGAAAGTCCACATCTCTTATACCCATTTGGGATCATGCGAGTGTCACATCTGCGGCGTTAAGTATAAAAATCAATGGTGCTTAGCGCGGCACAAAGCGAGACACCATGACGTCAAGGAGTACAAATGTTCGAAATGTCCGGAGCAGTTCCATTCGCAATACCAGAAGCAGAAGCACATGATCAAAGTTCACGACGAAGGCCACAAGTGCAGTTTCTGCGGCCGTATGTTTACGAGAAACTCGTTTATGAAAGATCACATACGGAGAGTTCATTTTAAAGAGAAAAATGTCCCGTGTTCGGTTTGCAATGAGAAATTCTTTGACAATTACCTACTGAAGATGCATATGGTGAAGCATGAAGGCGAAAGGAAGTTCACCTGCGAGATATGTGGGAAAGCGTTTCTAAGACGCAGCAATTTGGGTTCGCATAAAGAGATGCATAAGAAGTATGGACATTTATAA
- Protein Sequence
- MEFDEIVVKESPGLCRCCLSEGCYKDLGTEYSWMNENEVYADMLLECFDISITQHNEGPNGPSRLICEVCITRLRDACNFKKQVLESEKRFIDMVARGEFRPKVLIYQTQMKAEENTEGVTAEDVEYLDDDIDFGEDEPAKSDETPNVTDSITAEPLPVKGKRGRPRKTADVKTVKKMKVLDEKPKTSKAVSKDIKRRKYKGCESSSMRRRKNLQILFNNTSIIPFKWRGKYLCFYCSKDVAEYSELRKHTKSHGSCSTKDHSLKVLKGGQNMEIKIDVSDITCEICSEPFPNIDEILNHLHVKHKLEYDRGVDMAIEEYRLADLTCLVCGERFTYFGYLVSHVNNTHPKNCLVCDDCGQKFNKKRDLFSHMKNYHREGGYQCEICPQSFSSLNILRKHRSNRHMTRCGICQLKLPSAALKQKHIDMEHPDDGSLQCDNCDKEFHTKQGLRMHSRKCKGDGDFFEIAFKKEDSTMDLDQNYEDLVKRPSVKQIRENIVIVINMSTAIPFNFYKNKFNCFYCSKDFPDSDAMREHTVMEHPVCDVKQKCIRKCRESVACVKIDISSLACKICFESISDLDNLLDHLIGKHDANYDKSITTCLQPYKLIKDHMACPNCPGEAFRFFGTLLKHMNKKHTNNNIICVYCGETFRRDQNLRVHIWRHHRDGRFKCNICGAECNIPSRLYMHMAKAHGVRAAKCPKCPETFATQYLRQKHLIDAHDSGHKCSYCGKLFTRNSFMRDHIRRTHLKEKNVECSICGMKFFNNILLRRHMVKHSGEKNFHCEVCGERFFWRKSLRTHMVRHNKHLDAPAKMNSANYYRRRNLQILFNNTTLMPFKWRMKYMCFYCGRDLGDYCDLKKHTKGHGDCSDSDRAIRLVKAADSEVKVDVSDLTCELCMTLCENFDEIVSHLIAKHNLPYNKDVDLMITTYRLSDLKCLSCERSFRYFRQLVSHMNNEHPNNCFLCHECEHTFNKKRDLDHHVRVYHRKTYTCLKCFSNFTSNSELQHHRRNAHISTCNICFKTFSSEVQRLGHMKRDHDTDGAECGFCHKVMTTKQGFLRHAAQCTVKEYKRPETIVVEDDDRKQSVKEIRNDIASVLNKSTALPFKYFMNRFRCFYCSKDFPRCDALKQHTVAEHPHCDITFKSMKLRNRYEGMQIKVDTSSLSCKLCFETLEDLDGLFEHLTSEHKTRLDRSVCEHMQAFKLIEDNFPCPFCGEVYRYFSLLLRHVSRTHTDNKFICTYCGKSFRTNPSLRAHVVTWHNFGRHKCDCGLVFTTNNNLKVHMGRAHGTKVVQCTECLEKFTTHYWMKRHMLETHGAGHKCSHCGRVYVKNSAMVNHVRRFHLKERNVECTVCFERFFDAQRLKTHMVKHVGERNFHCDICGKKFLWKKNLRGHMSSHNKLVNSNNEYGPYEGCTSERRRKNLKTLFNYTTVMPFKWRGRYLCFYCGKTYTDYVEFKKHTKSHGPCTTKDYSLRTIKGNHVEIKVDVSEVACDICIEPFESQSVSEIIDHLIIKHNLEYDKSIDIPFQEYRLEDFRCLFCEQQFSYFGYLVNHVNNAHPQNSYICDECGVSFNKKRDLALHFRNYHRQGGYPCDQCLQSFTSFHLLRRHQKHHFRQCNNCGMRFSSLTFLQKHMQVDHPDDGSYKCNYCSKELHSTQGLNQHRSKCKVKLLAHEVPSSLPVENVEAQKNLNLQQMRQNIQCILNMSTATPFKFFSKFTCFYCSSKYVEFEELRDHTASEHPVCDLKSKYMSKCKGERVTVKIDVSVLACKVCCVPMDDLESLVDHLIAEHQANYDKSVKGCVEPFRIVKDNIPCPICSTVFRYFSTLQRHLNTVHSNNNRICDFCGKTFRNGANLKVHISYTHLGSCECHICGVKYKNQWCLARHKARHHDVKEYKCSKCPEQFHSQYQKQKHMIKVHDEGHKCSFCGRMFTRNSFMKDHIRRVHFKEKNVPCSVCNEKFFDNYLLKMHMVKHEGERKFTCEICGKAFLRRSNLGSHKEMHKKYGHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -